RNA–Protein interactions for RNA: ENST00000493510.1

KPNA1-209, Transcript of karyopherin subunit alpha 1, humanhuman

TSL 4

Gene KPNA1, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA1-209ENST00000493510 SOX12O15370 315 aa10.73□□□□□ -0.69
KPNA1-209ENST00000493510 PDE3BQ13370 1112 aa10.73□□□□□ -0.69
KPNA1-209ENST00000493510 SLC15A2Q16348 729 aa10.73□□□□□ -0.69
KPNA1-209ENST00000493510 CCDC141Q6ZP82 1450 aa10.73□□□□□ -0.69
KPNA1-209ENST00000493510 CCDC85CA6NKD9 419 aa10.72□□□□□ -0.69
KPNA1-209ENST00000493510 FOXO3O43524 673 aa10.72□□□□□ -0.69
KPNA1-209ENST00000493510 PPP1R37O75864 691 aa10.72□□□□□ -0.69
KPNA1-209ENST00000493510 NLGN2Q8NFZ4 835 aa10.72□□□□□ -0.69
KPNA1-209ENST00000493510 PLCH1Q4KWH8 1693 aa10.72□□□□□ -0.69
KPNA1-209ENST00000493510 THSD7AQ9UPZ6 1657 aa10.72□□□□□ -0.69
KPNA1-209ENST00000493510 CEP152O94986 1710 aa10.72□□□□□ -0.69
KPNA1-209ENST00000493510 C11orf95C9JLR9 678 aaPredicted RBP10.71□□□□□ -0.69
KPNA1-209ENST00000493510 TSPY4P0CV99 314 aa10.71□□□□□ -0.69
KPNA1-209ENST00000493510 TSPY10P0CW01 314 aa10.71□□□□□ -0.69
KPNA1-209ENST00000493510 ESCO1Q5FWF5 840 aa10.71□□□□□ -0.69
KPNA1-209ENST00000493510 SPATA31A3Q5VYP0 1347 aa10.71□□□□□ -0.69
KPNA1-209ENST00000493510 C16orf71Q8IYS4 520 aaPredicted RBP10.71□□□□□ -0.69
KPNA1-209ENST00000493510 FBXO22Q8NEZ5 403 aa10.71□□□□□ -0.69
KPNA1-209ENST00000493510 BTG4Q9NY30 223 aa10.71□□□□□ -0.69
KPNA1-209ENST00000493510 PHF8Q9UPP1 1060 aa10.71□□□□□ -0.69
KPNA1-209ENST00000493510 DLL1O00548 723 aa10.7□□□□□ -0.7
KPNA1-209ENST00000493510 POLD1P28340 1107 aa10.7□□□□□ -0.7
KPNA1-209ENST00000493510 KCNV2Q8TDN2 545 aa10.7□□□□□ -0.7
KPNA1-209ENST00000493510 DHX57Q6P158 1386 aaKnown RBP10.69□□□□□ -0.7
KPNA1-209ENST00000493510 CD44P16070 742 aaKnown RBP10.69□□□□□ -0.7
KPNA1-209ENST00000493510 EIF2AK4Q9P2K8 1649 aaKnown RBP10.67□□□□□ -0.7
KPNA1-209ENST00000493510 CABLES1Q8TDN4 633 aa10.67□□□□□ -0.7
KPNA1-209ENST00000493510 PHF12Q96QT6 1004 aa10.67□□□□□ -0.7
KPNA1-209ENST00000493510 XRN1Q8IZH2 1706 aaKnown RBP10.67□□□□□ -0.7
KPNA1-209ENST00000493510 FOXN1O15353 648 aa10.66□□□□□ -0.7
KPNA1-209ENST00000493510 CTCFP49711 727 aaPredicted RBP10.66□□□□□ -0.7
KPNA1-209ENST00000493510 PRPF38BQ5VTL8 546 aaKnown RBP10.66□□□□□ -0.7
KPNA1-209ENST00000493510 NALCNQ8IZF0 1738 aa10.64□□□□□ -0.71
KPNA1-209ENST00000493510 PITPNM2Q9BZ72 1349 aa10.64□□□□□ -0.71
KPNA1-209ENST00000493510 RRBP1Q9P2E9 1410 aaKnown RBP10.64□□□□□ -0.71
KPNA1-209ENST00000493510 RGPD3A6NKT7 1758 aaPredicted RBP10.64□□□□□ -0.71
KPNA1-209ENST00000493510 RGPD4Q7Z3J3 1758 aa10.64□□□□□ -0.71
KPNA1-209ENST00000493510 LRRIQ1Q96JM4 1722 aa10.64□□□□□ -0.71
KPNA1-209ENST00000493510 PDE4DIPQ5VU43 2346 aa10.63□□□□□ -0.71
KPNA1-209ENST00000493510 AIDAQ96BJ3 306 aa10.63□□□□□ -0.71
KPNA1-209ENST00000493510 KANK1Q14678 1352 aa10.63□□□□□ -0.71
KPNA1-209ENST00000493510 TULP4Q9NRJ4 1543 aa10.63□□□□□ -0.71
KPNA1-209ENST00000493510 SPATA31A1Q5TZJ5 1347 aa10.62□□□□□ -0.71
KPNA1-209ENST00000493510 PMFBP1Q8TBY8 1022 aa10.62□□□□□ -0.71
KPNA1-209ENST00000493510 NMRK2Q9NPI5 230 aa10.62□□□□□ -0.71
KPNA1-209ENST00000493510 NRAPQ86VF7 1730 aa10.61□□□□□ -0.71
KPNA1-209ENST00000493510 SLC16A10Q8TF71 515 aa10.61□□□□□ -0.71
KPNA1-209ENST00000493510 GOLGA2Q08379 1002 aa10.6□□□□□ -0.71
KPNA1-209ENST00000493510 E2F4Q16254 413 aa10.6□□□□□ -0.71
KPNA1-209ENST00000493510 CCDC144AA2RUR9 1427 aa10.59□□□□□ -0.71
KPNA1-209ENST00000493510 PRAG1Q86YV5 1406 aa10.59□□□□□ -0.71
KPNA1-209ENST00000493510 ARHGEF28Q8N1W1 1705 aaKnown RBP10.59□□□□□ -0.71
KPNA1-209ENST00000493510 TXNRD1Q16881 649 aa10.59□□□□□ -0.71
KPNA1-209ENST00000493510 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.59□□□□□ -0.71
KPNA1-209ENST00000493510 ARHGEF1Q92888 912 aaKnown RBP10.59□□□□□ -0.71
KPNA1-209ENST00000493510 GCC1Q96CN9 775 aa10.59□□□□□ -0.71
KPNA1-209ENST00000493510 TMEM106CQ9BVX2 250 aa10.59□□□□□ -0.71
KPNA1-209ENST00000493510 BARGINQ6ZT62 677 aa10.58□□□□□ -0.72
KPNA1-209ENST00000493510 KRT28Q7Z3Y7 464 aa10.58□□□□□ -0.72
KPNA1-209ENST00000493510 SMC1BQ8NDV3 1235 aa10.58□□□□□ -0.72
KPNA1-209ENST00000493510 MS4A4AQ96JQ5 239 aa10.58□□□□□ -0.72
KPNA1-209ENST00000493510 METP08581 1390 aa10.57□□□□□ -0.72
KPNA1-209ENST00000493510 LBX1P52954 281 aa10.57□□□□□ -0.72
KPNA1-209ENST00000493510 PSME1Q06323 249 aa10.57□□□□□ -0.72
KPNA1-209ENST00000493510 TNS3Q68CZ2 1445 aa10.57□□□□□ -0.72
KPNA1-209ENST00000493510 CASKIN1Q8WXD9 1431 aa10.57□□□□□ -0.72
KPNA1-209ENST00000493510 ARHGEF10O15013 1369 aa10.56□□□□□ -0.72
KPNA1-209ENST00000493510 LMOD2Q6P5Q4 547 aa10.56□□□□□ -0.72
KPNA1-209ENST00000493510 PDE4AP27815 886 aa10.55□□□□□ -0.72
KPNA1-209ENST00000493510 MS4A3Q96HJ5 214 aa10.55□□□□□ -0.72
KPNA1-209ENST00000493510 KIF15Q9NS87 1388 aa10.54□□□□□ -0.72
KPNA1-209ENST00000493510 OVOS2A0A0G2JMS6 1433 aa10.54□□□□□ -0.72
KPNA1-209ENST00000493510 OVOS2A0A0J9YW53 1432 aa10.54□□□□□ -0.72
KPNA1-209ENST00000493510 TULP1O00294 542 aaPredicted RBP10.54□□□□□ -0.72
KPNA1-209ENST00000493510 MKRN3Q13064 507 aaKnown RBP10.54□□□□□ -0.72
KPNA1-209ENST00000493510 OVOS2Q6IE36 1432 aa10.54□□□□□ -0.72
KPNA1-209ENST00000493510 LARP6Q9BRS8 491 aaKnown RBP10.54□□□□□ -0.72
KPNA1-209ENST00000493510 USP35Q9P2H5 1018 aa10.54□□□□□ -0.72
KPNA1-209ENST00000493510 TRPC6Q9Y210 931 aa10.54□□□□□ -0.72
KPNA1-209ENST00000493510 LMTK2Q8IWU2 1503 aa10.53□□□□□ -0.72
KPNA1-209ENST00000493510 C19orf67A6NJJ6 358 aa10.53□□□□□ -0.72
KPNA1-209ENST00000493510 PCGF6Q9BYE7 350 aa10.53□□□□□ -0.72
KPNA1-209ENST00000493510 COL14A1Q05707 1796 aaKnown RBP10.52□□□□□ -0.72
KPNA1-209ENST00000493510 TNRC18O15417 2968 aaPredicted RBP10.52□□□□□ -0.73
KPNA1-209ENST00000493510 TECPR2O15040 1411 aa10.51□□□□□ -0.73
KPNA1-209ENST00000493510 MPNDQ8N594 471 aa10.51□□□□□ -0.73
KPNA1-209ENST00000493510 DUOX2Q9NRD8 1548 aa10.51□□□□□ -0.73
KPNA1-209ENST00000493510 ARHGEF5Q12774 1597 aa10.51□□□□□ -0.73
KPNA1-209ENST00000493510 STRN4Q9NRL3 753 aa10.5□□□□□ -0.73
KPNA1-209ENST00000493510 GCC2Q8IWJ2 1684 aa10.5□□□□□ -0.73
KPNA1-209ENST00000493510 ZEB1P37275 1124 aaPredicted RBP10.49□□□□□ -0.73
KPNA1-209ENST00000493510 PPARGC1BQ86YN6 1023 aaKnown RBP10.49□□□□□ -0.73
KPNA1-209ENST00000493510 CRISPLD2Q9H0B8 497 aa10.49□□□□□ -0.73
KPNA1-209ENST00000493510 PRDM11Q9NQV5 511 aa10.49□□□□□ -0.73
KPNA1-209ENST00000493510 CD2APQ9Y5K6 639 aa10.49□□□□□ -0.73
KPNA1-209ENST00000493510 SBNO1A3KN83 1393 aa10.49□□□□□ -0.73
KPNA1-209ENST00000493510 SEMA3EO15041 775 aa10.48□□□□□ -0.73
KPNA1-209ENST00000493510 MFSD10Q14728 455 aa10.48□□□□□ -0.73
KPNA1-209ENST00000493510 PTF1AQ7RTS3 328 aa10.48□□□□□ -0.73
KPNA1-209ENST00000493510 TCP11L2Q8N4U5 519 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms