RNA–Protein interactions for RNA: ENST00000480102.1

PTCD3-213, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-213ENST00000480102 DNAJB2P25686 324 aa7.4□□□□□ -1.22
PTCD3-213ENST00000480102 HDGFP51858 240 aaKnown RBP7.4□□□□□ -1.22
PTCD3-213ENST00000480102 SWT1Q5T5J6 900 aaKnown RBP7.4□□□□□ -1.22
PTCD3-213ENST00000480102 PXYLP1Q8TE99 480 aa7.4□□□□□ -1.22
PTCD3-213ENST00000480102 MED14O60244 1454 aa7.4□□□□□ -1.22
PTCD3-213ENST00000480102 C3P01024 1663 aa7.39□□□□□ -1.23
PTCD3-213ENST00000480102 NAIPQ13075 1403 aa7.39□□□□□ -1.23
PTCD3-213ENST00000480102 OATP04181 439 aa7.39□□□□□ -1.23
PTCD3-213ENST00000480102 LMOD2Q6P5Q4 547 aa7.39□□□□□ -1.23
PTCD3-213ENST00000480102 METTL3Q86U44 580 aaKnown RBP7.39□□□□□ -1.23
PTCD3-213ENST00000480102 TMEM134Q9H6X4 195 aa7.39□□□□□ -1.23
PTCD3-213ENST00000480102 PLA2G2EQ9NZK7 142 aa7.39□□□□□ -1.23
PTCD3-213ENST00000480102 ZNF142P52746 1687 aaPredicted RBP7.38□□□□□ -1.23
PTCD3-213ENST00000480102 CEP170BQ9Y4F5 1589 aaPredicted RBP7.38□□□□□ -1.23
PTCD3-213ENST00000480102 EFCAB6Q5THR3 1501 aa7.38□□□□□ -1.23
PTCD3-213ENST00000480102 IQSEC2Q5JU85 1478 aa7.38□□□□□ -1.23
PTCD3-213ENST00000480102 ARHGAP23Q9P227 1491 aa7.38□□□□□ -1.23
PTCD3-213ENST00000480102 RCCD1A6NED2 376 aa7.38□□□□□ -1.23
PTCD3-213ENST00000480102 RNF40O75150 1001 aa7.38□□□□□ -1.23
PTCD3-213ENST00000480102 PPP4CP60510 307 aa7.38□□□□□ -1.23
PTCD3-213ENST00000480102 SLF2Q8IX21 1173 aa7.38□□□□□ -1.23
PTCD3-213ENST00000480102 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.37□□□□□ -1.23
PTCD3-213ENST00000480102 CHIC2Q9UKJ5 165 aa7.37□□□□□ -1.23
PTCD3-213ENST00000480102 UNC13BO14795 1591 aa7.37□□□□□ -1.23
PTCD3-213ENST00000480102 SLIT1O75093 1534 aa7.37□□□□□ -1.23
PTCD3-213ENST00000480102 KDM5AP29375 1690 aaKnown RBP7.36□□□□□ -1.23
PTCD3-213ENST00000480102 SLC4A3P48751 1232 aa7.36□□□□□ -1.23
PTCD3-213ENST00000480102 MAP2K5Q13163 448 aa7.36□□□□□ -1.23
PTCD3-213ENST00000480102 FBXO31Q5XUX0 539 aaPredicted RBP7.36□□□□□ -1.23
PTCD3-213ENST00000480102 ANKLE2Q86XL3 938 aa7.36□□□□□ -1.23
PTCD3-213ENST00000480102 NECTIN2Q92692 538 aa7.36□□□□□ -1.23
PTCD3-213ENST00000480102 NUP155O75694 1391 aa7.35□□□□□ -1.23
PTCD3-213ENST00000480102 UGGT1Q9NYU2 1555 aa7.35□□□□□ -1.23
PTCD3-213ENST00000480102 HSPA2P54652 639 aa7.35□□□□□ -1.23
PTCD3-213ENST00000480102 CLTCQ00610 1675 aaKnown RBP7.35□□□□□ -1.23
PTCD3-213ENST00000480102 MYO3AQ8NEV4 1616 aa7.34□□□□□ -1.23
PTCD3-213ENST00000480102 TMEM2Q9UHN6 1383 aa7.34□□□□□ -1.23
PTCD3-213ENST00000480102 IQGAP3Q86VI3 1631 aa7.34□□□□□ -1.24
PTCD3-213ENST00000480102 ITGBL1O95965 494 aaPredicted RBP7.33□□□□□ -1.24
PTCD3-213ENST00000480102 IDI1Q13907 227 aa7.33□□□□□ -1.24
PTCD3-213ENST00000480102 IFFO2Q5TF58 517 aa7.33□□□□□ -1.24
PTCD3-213ENST00000480102 CAMSAP1Q5T5Y3 1602 aa7.33□□□□□ -1.24
PTCD3-213ENST00000480102 TET3O43151 1660 aa7.32□□□□□ -1.24
PTCD3-213ENST00000480102 APLP1P51693 650 aa7.32□□□□□ -1.24
PTCD3-213ENST00000480102 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.32□□□□□ -1.24
PTCD3-213ENST00000480102 PHOX2BQ99453 314 aa7.32□□□□□ -1.24
PTCD3-213ENST00000480102 MINK1Q8N4C8 1332 aaPredicted RBP7.31□□□□□ -1.24
PTCD3-213ENST00000480102 IRF6O14896 467 aa7.31□□□□□ -1.24
PTCD3-213ENST00000480102 FBXO41Q8TF61 875 aa7.31□□□□□ -1.24
PTCD3-213ENST00000480102 ZC3H15Q8WU90 426 aaKnown RBP7.31□□□□□ -1.24
PTCD3-213ENST00000480102 NEURL4Q96JN8 1562 aa7.31□□□□□ -1.24
PTCD3-213ENST00000480102 EID1Q9Y6B2 187 aa7.31□□□□□ -1.24
PTCD3-213ENST00000480102 PIK3R4Q99570 1358 aa7.31□□□□□ -1.24
PTCD3-213ENST00000480102 SCAF11Q99590 1463 aaKnown RBP7.3□□□□□ -1.24
PTCD3-213ENST00000480102 RPGRIP1LQ68CZ1 1315 aa7.3□□□□□ -1.24
PTCD3-213ENST00000480102 NPHP4O75161 1426 aaPredicted RBP7.3□□□□□ -1.24
PTCD3-213ENST00000480102 ZFYVE9O95405 1425 aa7.3□□□□□ -1.24
PTCD3-213ENST00000480102 ZMYND10O75800 440 aa7.3□□□□□ -1.24
PTCD3-213ENST00000480102 NLRP7Q8WX94 980 aa7.3□□□□□ -1.24
PTCD3-213ENST00000480102 CCDC102AQ96A19 550 aa7.3□□□□□ -1.24
PTCD3-213ENST00000480102 DAXXQ9UER7 740 aaPredicted RBP7.3□□□□□ -1.24
PTCD3-213ENST00000480102 ADGRB3O60242 1522 aa7.3□□□□□ -1.24
PTCD3-213ENST00000480102 SETD5Q9C0A6 1442 aa7.29□□□□□ -1.24
PTCD3-213ENST00000480102 NCOA3Q9Y6Q9 1424 aa7.29□□□□□ -1.24
PTCD3-213ENST00000480102 CPS1P31327 1500 aa7.29□□□□□ -1.24
PTCD3-213ENST00000480102 PRR14Q9BWN1 585 aa7.29□□□□□ -1.24
PTCD3-213ENST00000480102 PIK3C2BO00750 1634 aa7.29□□□□□ -1.24
PTCD3-213ENST00000480102 LTBP4Q8N2S1 1624 aa7.29□□□□□ -1.24
PTCD3-213ENST00000480102 PLEKHG1Q9ULL1 1385 aa7.29□□□□□ -1.24
PTCD3-213ENST00000480102 SYNMO15061 1565 aa7.29□□□□□ -1.24
PTCD3-213ENST00000480102 STRCQ7RTU9 1775 aa7.28□□□□□ -1.24
PTCD3-213ENST00000480102 PRAG1Q86YV5 1406 aa7.28□□□□□ -1.24
PTCD3-213ENST00000480102 TRPM2O94759 1503 aa7.28□□□□□ -1.24
PTCD3-213ENST00000480102 CFHP08603 1231 aa7.28□□□□□ -1.24
PTCD3-213ENST00000480102 SLC10A3P09131 477 aa7.28□□□□□ -1.24
PTCD3-213ENST00000480102 KCNC4Q03721 635 aa7.28□□□□□ -1.24
PTCD3-213ENST00000480102 BARGINQ6ZT62 677 aa7.28□□□□□ -1.24
PTCD3-213ENST00000480102 TBX22Q9Y458 520 aa7.28□□□□□ -1.24
PTCD3-213ENST00000480102 GCC2Q8IWJ2 1684 aa7.28□□□□□ -1.24
PTCD3-213ENST00000480102 LTKP29376 864 aa7.27□□□□□ -1.25
PTCD3-213ENST00000480102 TJAP1Q5JTD0 557 aa7.27□□□□□ -1.25
PTCD3-213ENST00000480102 TXNDC2Q86VQ3 553 aa7.27□□□□□ -1.25
PTCD3-213ENST00000480102 MTRQ99707 1265 aa7.27□□□□□ -1.25
PTCD3-213ENST00000480102 ITGAEP38570 1179 aa7.26□□□□□ -1.25
PTCD3-213ENST00000480102 KMT5BQ4FZB7 885 aa7.26□□□□□ -1.25
PTCD3-213ENST00000480102 PPARGC1BQ86YN6 1023 aaKnown RBP7.26□□□□□ -1.25
PTCD3-213ENST00000480102 NKTRP30414 1462 aaKnown RBP7.25□□□□□ -1.25
PTCD3-213ENST00000480102 UBR1Q8IWV7 1749 aa7.25□□□□□ -1.25
PTCD3-213ENST00000480102 A0A0G2JS52 829 aa7.25□□□□□ -1.25
PTCD3-213ENST00000480102 DDX11L8A8MPP1 907 aa7.25□□□□□ -1.25
PTCD3-213ENST00000480102 ACTN4O43707 911 aaKnown RBP7.25□□□□□ -1.25
PTCD3-213ENST00000480102 KCNA6P17658 529 aa7.25□□□□□ -1.25
PTCD3-213ENST00000480102 SULF1Q8IWU6 871 aa7.25□□□□□ -1.25
PTCD3-213ENST00000480102 KRI1Q8N9T8 703 aaKnown RBP7.25□□□□□ -1.25
PTCD3-213ENST00000480102 MPHOSPH9Q99550 1183 aa7.25□□□□□ -1.25
PTCD3-213ENST00000480102 IL21Q9HBE4 155 aa7.25□□□□□ -1.25
PTCD3-213ENST00000480102 PCDHB3Q9Y5E6 796 aa7.25□□□□□ -1.25
PTCD3-213ENST00000480102 RIMS2Q9UQ26 1411 aa7.25□□□□□ -1.25
PTCD3-213ENST00000480102 DIP2AQ14689 1571 aa7.25□□□□□ -1.25
PTCD3-213ENST00000480102 TMEM131LA2VDJ0 1609 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms