RNA–Protein interactions for RNA: ENST00000460925.1

SF3A3-202, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 793 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-202ENST00000460925 PTPRNQ16849 979 aa7.7□□□□□ -1.18
SF3A3-202ENST00000460925 LCE2DQ5TA82 110 aaPredicted RBP7.7□□□□□ -1.18
SF3A3-202ENST00000460925 FAM163AQ96GL9 167 aaPredicted RBP7.7□□□□□ -1.18
SF3A3-202ENST00000460925 HPS5Q9UPZ3 1129 aa7.7□□□□□ -1.18
SF3A3-202ENST00000460925 USTQ9Y2C2 406 aa7.7□□□□□ -1.18
SF3A3-202ENST00000460925 PCDHB3Q9Y5E6 796 aa7.7□□□□□ -1.18
SF3A3-202ENST00000460925 JUNDP17535 347 aa7.69□□□□□ -1.18
SF3A3-202ENST00000460925 SEMA3FQ13275 785 aa7.69□□□□□ -1.18
SF3A3-202ENST00000460925 STAC3Q96MF2 364 aa7.69□□□□□ -1.18
SF3A3-202ENST00000460925 FKBPLQ9UIM3 349 aa7.69□□□□□ -1.18
SF3A3-202ENST00000460925 BCAMP50895 628 aa7.68□□□□□ -1.18
SF3A3-202ENST00000460925 MSS51Q4VC12 460 aa7.68□□□□□ -1.18
SF3A3-202ENST00000460925 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.67□□□□□ -1.18
SF3A3-202ENST00000460925 ZBBXA8MT70 800 aa7.67□□□□□ -1.18
SF3A3-202ENST00000460925 WNT2BQ93097 391 aa7.67□□□□□ -1.18
SF3A3-202ENST00000460925 TFIP11Q9UBB9 837 aaKnown RBP7.67□□□□□ -1.18
SF3A3-202ENST00000460925 CARMIL2Q6F5E8 1435 aa7.67□□□□□ -1.18
SF3A3-202ENST00000460925 PLB1Q6P1J6 1458 aa7.67□□□□□ -1.18
SF3A3-202ENST00000460925 RAPGEF6Q8TEU7 1601 aa7.67□□□□□ -1.18
SF3A3-202ENST00000460925 FBXO45P0C2W1 286 aa7.66□□□□□ -1.18
SF3A3-202ENST00000460925 NFATC2IPQ8NCF5 419 aa7.66□□□□□ -1.18
SF3A3-202ENST00000460925 GPKOWQ92917 476 aaPredicted RBP eCLIP7.66□□□□□ -1.18
SF3A3-202ENST00000460925 GPSM3Q9Y4H4 160 aa7.66□□□□□ -1.18
SF3A3-202ENST00000460925 MAFBQ9Y5Q3 323 aaPredicted RBP7.66□□□□□ -1.18
SF3A3-202ENST00000460925 ADCY10Q96PN6 1610 aa7.66□□□□□ -1.18
SF3A3-202ENST00000460925 DXOO77932 396 aaKnown RBP7.65□□□□□ -1.18
SF3A3-202ENST00000460925 ABCA8O94911 1581 aa7.65□□□□□ -1.18
SF3A3-202ENST00000460925 ATG7O95352 703 aa7.65□□□□□ -1.18
SF3A3-202ENST00000460925 RFX1P22670 979 aa7.65□□□□□ -1.18
SF3A3-202ENST00000460925 LMOD1P29536 600 aaPredicted RBP7.65□□□□□ -1.18
SF3A3-202ENST00000460925 MMP16P51512 607 aa7.65□□□□□ -1.18
SF3A3-202ENST00000460925 ANKRD13DQ6ZTN6 518 aa7.65□□□□□ -1.18
SF3A3-202ENST00000460925 EVA1BQ9NVM1 165 aa7.65□□□□□ -1.18
SF3A3-202ENST00000460925 CDK13Q14004 1512 aaKnown RBP7.64□□□□□ -1.19
SF3A3-202ENST00000460925 VPS8Q8N3P4 1428 aa7.64□□□□□ -1.19
SF3A3-202ENST00000460925 PATL2C9JE40 543 aaKnown RBP7.64□□□□□ -1.19
SF3A3-202ENST00000460925 ATP9BO43861 1147 aa7.64□□□□□ -1.19
SF3A3-202ENST00000460925 FAM160A2Q8N612 972 aaPredicted RBP7.64□□□□□ -1.19
SF3A3-202ENST00000460925 MAP10Q9P2G4 905 aa7.64□□□□□ -1.19
SF3A3-202ENST00000460925 CCDC9Q9Y3X0 531 aaKnown RBP7.64□□□□□ -1.19
SF3A3-202ENST00000460925 HECW1Q76N89 1606 aa7.63□□□□□ -1.19
SF3A3-202ENST00000460925 PTPRGP23470 1445 aa7.63□□□□□ -1.19
SF3A3-202ENST00000460925 CCNYL3P0C7X3 344 aa7.63□□□□□ -1.19
SF3A3-202ENST00000460925 CSB-PGBD3P0DP91 1061 aa7.63□□□□□ -1.19
SF3A3-202ENST00000460925 MCCD1P59942 119 aaPredicted RBP7.63□□□□□ -1.19
SF3A3-202ENST00000460925 TBC1D9Q6ZT07 1266 aa7.63□□□□□ -1.19
SF3A3-202ENST00000460925 NYAP1Q6ZVC0 841 aa7.63□□□□□ -1.19
SF3A3-202ENST00000460925 ARMC2Q8NEN0 867 aa7.63□□□□□ -1.19
SF3A3-202ENST00000460925 ZNF592Q92610 1267 aa7.63□□□□□ -1.19
SF3A3-202ENST00000460925 WBP1LQ9NX94 342 aa7.63□□□□□ -1.19
SF3A3-202ENST00000460925 EIF5BO60841 1220 aaKnown RBP7.62□□□□□ -1.19
SF3A3-202ENST00000460925 BRD1O95696 1058 aa7.62□□□□□ -1.19
SF3A3-202ENST00000460925 KCNH2Q12809 1159 aa7.62□□□□□ -1.19
SF3A3-202ENST00000460925 PDXDC2PQ6P474 469 aa7.62□□□□□ -1.19
SF3A3-202ENST00000460925 THSD4Q6ZMP0 1018 aa7.62□□□□□ -1.19
SF3A3-202ENST00000460925 AEBP1Q8IUX7 1158 aa7.62□□□□□ -1.19
SF3A3-202ENST00000460925 SPSB2Q99619 263 aa7.62□□□□□ -1.19
SF3A3-202ENST00000460925 CFAP43Q8NDM7 1665 aa7.62□□□□□ -1.19
SF3A3-202ENST00000460925 ZCCHC11Q5TAX3 1644 aaKnown RBP7.62□□□□□ -1.19
SF3A3-202ENST00000460925 ABCC2Q92887 1545 aa7.62□□□□□ -1.19
SF3A3-202ENST00000460925 NUP153P49790 1475 aaKnown RBP7.62□□□□□ -1.19
SF3A3-202ENST00000460925 FMN1Q68DA7 1419 aa7.61□□□□□ -1.19
SF3A3-202ENST00000460925 CYB5RLQ6IPT4 315 aa7.61□□□□□ -1.19
SF3A3-202ENST00000460925 NUDT12Q9BQG2 462 aa7.61□□□□□ -1.19
SF3A3-202ENST00000460925 FYCO1Q9BQS8 1478 aa7.61□□□□□ -1.19
SF3A3-202ENST00000460925 CTHP32929 405 aa7.6□□□□□ -1.19
SF3A3-202ENST00000460925 PTK2Q05397 1052 aa7.6□□□□□ -1.19
SF3A3-202ENST00000460925 KCNA1Q09470 495 aa7.6□□□□□ -1.19
SF3A3-202ENST00000460925 ELOAQ14241 798 aaKnown RBP7.6□□□□□ -1.19
SF3A3-202ENST00000460925 KANK4Q5T7N3 995 aaPredicted RBP7.6□□□□□ -1.19
SF3A3-202ENST00000460925 PLEKHM2Q8IWE5 1019 aa7.6□□□□□ -1.19
SF3A3-202ENST00000460925 CASKIN1Q8WXD9 1431 aa7.6□□□□□ -1.19
SF3A3-202ENST00000460925 UACAQ9BZF9 1416 aa7.6□□□□□ -1.19
SF3A3-202ENST00000460925 MAGI3Q5TCQ9 1506 aa7.59□□□□□ -1.19
SF3A3-202ENST00000460925 NBPF14Q5TI25 921 aa7.59□□□□□ -1.19
SF3A3-202ENST00000460925 PPARGC1BQ86YN6 1023 aaKnown RBP7.59□□□□□ -1.19
SF3A3-202ENST00000460925 EPRSP07814 1512 aaKnown RBP7.58□□□□□ -1.2
SF3A3-202ENST00000460925 TMEM88BA6NKF7 163 aa7.58□□□□□ -1.2
SF3A3-202ENST00000460925 ADH1BP00325 375 aa7.58□□□□□ -1.2
SF3A3-202ENST00000460925 OCSTAMPQ9BR26 566 aa7.58□□□□□ -1.2
SF3A3-202ENST00000460925 KRTAP3-3Q9BYR6 98 aa7.58□□□□□ -1.2
SF3A3-202ENST00000460925 KRTAP3-2Q9BYR7 98 aa7.58□□□□□ -1.2
SF3A3-202ENST00000460925 VRTNQ9H8Y1 702 aa7.58□□□□□ -1.2
SF3A3-202ENST00000460925 TIAM1Q13009 1591 aa7.58□□□□□ -1.2
SF3A3-202ENST00000460925 PIK3CDO00329 1044 aa7.57□□□□□ -1.2
SF3A3-202ENST00000460925 ZPR1O75312 459 aa7.57□□□□□ -1.2
SF3A3-202ENST00000460925 PHTF2Q8N3S3 785 aa7.57□□□□□ -1.2
SF3A3-202ENST00000460925 CHIC2Q9UKJ5 165 aa7.57□□□□□ -1.2
SF3A3-202ENST00000460925 MYT1LQ9UL68 1186 aa7.57□□□□□ -1.2
SF3A3-202ENST00000460925 UHRF1BP1LA0JNW5 1464 aa7.56□□□□□ -1.2
SF3A3-202ENST00000460925 ATP10BO94823 1461 aa7.56□□□□□ -1.2
SF3A3-202ENST00000460925 LZTS3O60299 673 aaPredicted RBP7.56□□□□□ -1.2
SF3A3-202ENST00000460925 COPS2P61201 443 aa7.56□□□□□ -1.2
SF3A3-202ENST00000460925 PRDM9Q9NQV7 894 aa7.56□□□□□ -1.2
SF3A3-202ENST00000460925 CEP126Q9P2H0 1117 aa7.56□□□□□ -1.2
SF3A3-202ENST00000460925 KIF14Q15058 1648 aa7.56□□□□□ -1.2
SF3A3-202ENST00000460925 USP17L3A6NCW0 530 aa7.55□□□□□ -1.2
SF3A3-202ENST00000460925 USP17L4A6NCW7 530 aa7.55□□□□□ -1.2
SF3A3-202ENST00000460925 USP17L5A8MUK1 530 aa7.55□□□□□ -1.2
SF3A3-202ENST00000460925 USP17L2Q6R6M4 530 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms