RNA–Protein interactions for RNA: ENST00000458649.6

AMBRA1-202, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 2 BASIC

Gene AMBRA1, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-202ENST00000458649 CCDC158Q5M9N0 1113 aa12.91□□□□□ -0.34
AMBRA1-202ENST00000458649 UBE2Q2Q8WVN8 375 aa12.91□□□□□ -0.34
AMBRA1-202ENST00000458649 BRMS1Q9HCU9 246 aa12.91□□□□□ -0.34
AMBRA1-202ENST00000458649 UBAP1LF5GYI3 381 aa12.91□□□□□ -0.34
AMBRA1-202ENST00000458649 MPHOSPH8Q99549 860 aa12.91□□□□□ -0.34
AMBRA1-202ENST00000458649 FOXD4L1Q9NU39 408 aa12.91□□□□□ -0.34
AMBRA1-202ENST00000458649 TMOD3Q9NYL9 352 aa12.91□□□□□ -0.34
AMBRA1-202ENST00000458649 SYCP2Q9BX26 1530 aa12.91□□□□□ -0.34
AMBRA1-202ENST00000458649 NUP160Q12769 1436 aa12.91□□□□□ -0.34
AMBRA1-202ENST00000458649 SKOR2Q2VWA4 1001 aaPredicted RBP12.91□□□□□ -0.34
AMBRA1-202ENST00000458649 NOL8Q76FK4 1167 aaKnown RBP12.91□□□□□ -0.34
AMBRA1-202ENST00000458649 HOOK1Q9UJC3 728 aaKnown RBP12.91□□□□□ -0.34
AMBRA1-202ENST00000458649 KDM5BQ9UGL1 1544 aa12.91□□□□□ -0.34
AMBRA1-202ENST00000458649 ASXL2Q76L83 1435 aa12.91□□□□□ -0.34
AMBRA1-202ENST00000458649 TWISTNBQ3B726 338 aaPredicted RBP12.91□□□□□ -0.34
AMBRA1-202ENST00000458649 FBXO31Q5XUX0 539 aaPredicted RBP12.91□□□□□ -0.34
AMBRA1-202ENST00000458649 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.91□□□□□ -0.342e-6■■■■■ 28.2
AMBRA1-202ENST00000458649 ABCA5Q8WWZ7 1642 aa12.91□□□□□ -0.34
AMBRA1-202ENST00000458649 RRP9O43818 475 aaKnown RBP12.9□□□□□ -0.34
AMBRA1-202ENST00000458649 C14orf93Q9H972 538 aaKnown RBP12.9□□□□□ -0.34
AMBRA1-202ENST00000458649 DISP1Q96F81 1524 aa12.9□□□□□ -0.34
AMBRA1-202ENST00000458649 NOS1P29475 1434 aa12.9□□□□□ -0.34
AMBRA1-202ENST00000458649 FCHSD2O94868 740 aa12.9□□□□□ -0.34
AMBRA1-202ENST00000458649 INTS3Q68E01 1043 aaKnown RBP12.9□□□□□ -0.34
AMBRA1-202ENST00000458649 ADAMTS2O95450 1211 aa12.9□□□□□ -0.34
AMBRA1-202ENST00000458649 IKQ13123 557 aaPredicted RBP12.9□□□□□ -0.34
AMBRA1-202ENST00000458649 TSR1Q2NL82 804 aaKnown RBP12.9□□□□□ -0.34
AMBRA1-202ENST00000458649 ZPR1O75312 459 aa12.89□□□□□ -0.35
AMBRA1-202ENST00000458649 CCT4P50991 539 aaKnown RBP12.89□□□□□ -0.35
AMBRA1-202ENST00000458649 XPCQ01831 940 aaPredicted RBP12.89□□□□□ -0.35
AMBRA1-202ENST00000458649 WAPLQ7Z5K2 1190 aa12.89□□□□□ -0.35
AMBRA1-202ENST00000458649 CEBPAP49715 358 aaPredicted RBP12.89□□□□□ -0.35
AMBRA1-202ENST00000458649 SLFN5Q08AF3 891 aa12.89□□□□□ -0.35
AMBRA1-202ENST00000458649 TMOD2Q9NZR1 351 aa12.89□□□□□ -0.35
AMBRA1-202ENST00000458649 EXOC5O00471 708 aa12.89□□□□□ -0.35
AMBRA1-202ENST00000458649 CNTROBQ8N137 903 aa12.89□□□□□ -0.35
AMBRA1-202ENST00000458649 TPM3P06753 285 aa12.88□□□□□ -0.35
AMBRA1-202ENST00000458649 CCDC57Q2TAC2 916 aa12.88□□□□□ -0.35
AMBRA1-202ENST00000458649 ZSCAN25Q6NSZ9 544 aa12.88□□□□□ -0.35
AMBRA1-202ENST00000458649 R3HCC1Q9Y3T6 440 aaKnown RBP12.88□□□□□ -0.35
AMBRA1-202ENST00000458649 RALGAPBQ86X10 1494 aa12.88□□□□□ -0.35
AMBRA1-202ENST00000458649 TPM1P09493 284 aa12.88□□□□□ -0.35
AMBRA1-202ENST00000458649 CNKSR2Q8WXI2 1034 aa12.88□□□□□ -0.35
AMBRA1-202ENST00000458649 BTBD11A6QL63 1104 aa12.87□□□□□ -0.35
AMBRA1-202ENST00000458649 ZNF518AQ6AHZ1 1483 aa12.87□□□□□ -0.35
AMBRA1-202ENST00000458649 ANKRD20A12PQ8NF67 263 aa12.87□□□□□ -0.35
AMBRA1-202ENST00000458649 ZNF428Q96B54 188 aa12.87□□□□□ -0.35
AMBRA1-202ENST00000458649 WDR7Q9Y4E6 1490 aa12.87□□□□□ -0.35
AMBRA1-202ENST00000458649 DISP3Q9P2K9 1392 aa12.87□□□□□ -0.35
AMBRA1-202ENST00000458649 MCTP1Q6DN14 999 aa12.87□□□□□ -0.35
AMBRA1-202ENST00000458649 IL27Q8NEV9 243 aa12.87□□□□□ -0.35
AMBRA1-202ENST00000458649 SRCIN1Q9C0H9 1055 aa12.87□□□□□ -0.35
AMBRA1-202ENST00000458649 PRM3Q9NNZ6 103 aa12.87□□□□□ -0.35
AMBRA1-202ENST00000458649 HSP90AB3PQ58FF7 597 aa12.87□□□□□ -0.35
AMBRA1-202ENST00000458649 NACAP1Q9BZK3 213 aa12.87□□□□□ -0.35
AMBRA1-202ENST00000458649 NOB1Q9ULX3 412 aaKnown RBP12.87□□□□□ -0.35
AMBRA1-202ENST00000458649 TRAPPC8Q9Y2L5 1435 aa12.87□□□□□ -0.35
AMBRA1-202ENST00000458649 NPHP3Q7Z494 1330 aa12.86□□□□□ -0.35
AMBRA1-202ENST00000458649 UHRF1BP1LA0JNW5 1464 aa12.86□□□□□ -0.35
AMBRA1-202ENST00000458649 SHANK2Q9UPX8 1470 aa12.86□□□□□ -0.35
AMBRA1-202ENST00000458649 FYB1O15117 783 aa12.86□□□□□ -0.35
AMBRA1-202ENST00000458649 TTC39AQ5SRH9 613 aa12.86□□□□□ -0.35
AMBRA1-202ENST00000458649 KRT28Q7Z3Y7 464 aa12.86□□□□□ -0.35
AMBRA1-202ENST00000458649 KRI1Q8N9T8 703 aaKnown RBP12.86□□□□□ -0.35
AMBRA1-202ENST00000458649 WASLO00401 505 aaPredicted RBP12.86□□□□□ -0.35
AMBRA1-202ENST00000458649 GNAI2P04899 355 aa12.86□□□□□ -0.35
AMBRA1-202ENST00000458649 PSMA5P28066 241 aa12.86□□□□□ -0.35
AMBRA1-202ENST00000458649 IGHMBP2P38935 993 aaKnown RBP12.86□□□□□ -0.35
AMBRA1-202ENST00000458649 PDE4CQ08493 712 aa12.86□□□□□ -0.35
AMBRA1-202ENST00000458649 RRS1Q15050 365 aaKnown RBP12.86□□□□□ -0.35
AMBRA1-202ENST00000458649 GNAT3A8MTJ3 354 aa12.86□□□□□ -0.35
AMBRA1-202ENST00000458649 SURF6O75683 361 aaKnown RBP12.86□□□□□ -0.35
AMBRA1-202ENST00000458649 TMPOP42166 694 aaKnown RBP12.86□□□□□ -0.35
AMBRA1-202ENST00000458649 FSD1Q9BTV5 496 aa12.86□□□□□ -0.35
AMBRA1-202ENST00000458649 CREBRFQ8IUR6 639 aa12.86□□□□□ -0.35
AMBRA1-202ENST00000458649 FOXO3O43524 673 aa12.85□□□□□ -0.35
AMBRA1-202ENST00000458649 SAMD1Q6SPF0 538 aaPredicted RBP12.85□□□□□ -0.35
AMBRA1-202ENST00000458649 TEX13AQ9BXU3 409 aaPredicted RBP12.85□□□□□ -0.35
AMBRA1-202ENST00000458649 PBRM1Q86U86 1689 aa12.85□□□□□ -0.35
AMBRA1-202ENST00000458649 ATF7IPQ6VMQ6 1270 aa12.85□□□□□ -0.35
AMBRA1-202ENST00000458649 DDX49Q9Y6V7 483 aaKnown RBP12.85□□□□□ -0.35
AMBRA1-202ENST00000458649 A2MP01023 1474 aa12.85□□□□□ -0.35
AMBRA1-202ENST00000458649 PDZRN3Q9UPQ7 1066 aa12.84□□□□□ -0.35
AMBRA1-202ENST00000458649 SAMD9Q5K651 1589 aa12.84□□□□□ -0.35
AMBRA1-202ENST00000458649 WWC2Q6AWC2 1192 aa12.84□□□□□ -0.35
AMBRA1-202ENST00000458649 C22orf23Q9BZE7 217 aa12.84□□□□□ -0.35
AMBRA1-202ENST00000458649 CWC15Q9P013 229 aaKnown RBP12.84□□□□□ -0.35
AMBRA1-202ENST00000458649 PRAG1Q86YV5 1406 aa12.84□□□□□ -0.35
AMBRA1-202ENST00000458649 NFE2L2Q16236 605 aa12.84□□□□□ -0.35
AMBRA1-202ENST00000458649 PES1O00541 588 aaKnown RBP12.83□□□□□ -0.36
AMBRA1-202ENST00000458649 SLC4A2P04920 1241 aa12.83□□□□□ -0.36
AMBRA1-202ENST00000458649 MVPQ14764 893 aaKnown RBP12.83□□□□□ -0.36
AMBRA1-202ENST00000458649 RBM5P52756 815 aaKnown RBP eCLIP12.82□□□□□ -0.36
AMBRA1-202ENST00000458649 GCC1Q96CN9 775 aa12.82□□□□□ -0.36
AMBRA1-202ENST00000458649 DNMT1P26358 1616 aaKnown RBP12.82□□□□□ -0.36
AMBRA1-202ENST00000458649 CEP126Q9P2H0 1117 aa12.82□□□□□ -0.36
AMBRA1-202ENST00000458649 TTC21BQ7Z4L5 1316 aa12.81□□□□□ -0.36
AMBRA1-202ENST00000458649 A0A087WZG4 1122 aa12.81□□□□□ -0.36
AMBRA1-202ENST00000458649 CDC45O75419 566 aa12.81□□□□□ -0.36
AMBRA1-202ENST00000458649 ABCC2Q92887 1545 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms