RNA–Protein interactions for RNA: ENST00000444237.2

SCN11A-202, Transcript of sodium voltage-gated channel alpha subunit 11, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SCN11A, Length 5,729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11A-202ENST00000444237 FSD2A1L4K1 749 aa6.11□□□□□ -1.43
SCN11A-202ENST00000444237 CCDC184Q52MB2 194 aa6.11□□□□□ -1.43
SCN11A-202ENST00000444237 PANK1Q8TE04 598 aa6.11□□□□□ -1.43
SCN11A-202ENST00000444237 LRRCC1Q9C099 1032 aa6.11□□□□□ -1.43
SCN11A-202ENST00000444237 A0A1B0GUA9 196 aa6.1□□□□□ -1.43
SCN11A-202ENST00000444237 CNPY4Q8N129 248 aa6.1□□□□□ -1.43
SCN11A-202ENST00000444237 TUBB4AP04350 444 aa6.1□□□□□ -1.43
SCN11A-202ENST00000444237 SSFA2P28290 1259 aa6.1□□□□□ -1.43
SCN11A-202ENST00000444237 FMNL3Q8IVF7 1028 aa6.1□□□□□ -1.43
SCN11A-202ENST00000444237 LNPKQ9C0E8 428 aa6.1□□□□□ -1.43
SCN11A-202ENST00000444237 KRBA2Q6ZNG9 492 aa6.1□□□□□ -1.43
SCN11A-202ENST00000444237 CHMP3Q9Y3E7 222 aa6.1□□□□□ -1.43
SCN11A-202ENST00000444237 PRXQ9BXM0 1461 aa6.1□□□□□ -1.43
SCN11A-202ENST00000444237 SKIDA1Q1XH10 827 aa6.1□□□□□ -1.43
SCN11A-202ENST00000444237 VPS37CA5D8V6 355 aaPredicted RBP6.1□□□□□ -1.43
SCN11A-202ENST00000444237 TMCO5BA8MYB1 307 aa6.1□□□□□ -1.43
SCN11A-202ENST00000444237 GTF2E1P29083 439 aaPredicted RBP6.1□□□□□ -1.43
SCN11A-202ENST00000444237 JAKMIP3Q5VZ66 844 aa6.1□□□□□ -1.43
SCN11A-202ENST00000444237 LUZP1Q86V48 1076 aa6.1□□□□□ -1.43
SCN11A-202ENST00000444237 PIBF1Q8WXW3 757 aa6.1□□□□□ -1.43
SCN11A-202ENST00000444237 MCM3P25205 808 aa6.09□□□□□ -1.43
SCN11A-202ENST00000444237 HDGFP51858 240 aaKnown RBP6.09□□□□□ -1.43
SCN11A-202ENST00000444237 MICALL1Q8N3F8 863 aa6.09□□□□□ -1.43
SCN11A-202ENST00000444237 GBP2P32456 591 aaPredicted RBP6.09□□□□□ -1.43
SCN11A-202ENST00000444237 MAP9Q49MG5 647 aa6.09□□□□□ -1.43
SCN11A-202ENST00000444237 TICAM2Q86XR7 235 aa6.09□□□□□ -1.43
SCN11A-202ENST00000444237 CERS3Q8IU89 383 aa6.09□□□□□ -1.43
SCN11A-202ENST00000444237 DMRT2Q9Y5R5 561 aa6.09□□□□□ -1.43
SCN11A-202ENST00000444237 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.09□□□□□ -1.43
SCN11A-202ENST00000444237 DHX29Q7Z478 1369 aaKnown RBP6.09□□□□□ -1.43
SCN11A-202ENST00000444237 CLSTN1O94985 981 aa6.09□□□□□ -1.43
SCN11A-202ENST00000444237 SLU7O95391 586 aaKnown RBP6.09□□□□□ -1.43
SCN11A-202ENST00000444237 EZRP15311 586 aaKnown RBP6.09□□□□□ -1.43
SCN11A-202ENST00000444237 TNMDQ9H2S6 317 aa6.09□□□□□ -1.43
SCN11A-202ENST00000444237 PLEKHH1Q9ULM0 1364 aa6.09□□□□□ -1.43
SCN11A-202ENST00000444237 APAF1O14727 1248 aa6.09□□□□□ -1.44
SCN11A-202ENST00000444237 BCL2L13Q9BXK5 485 aa6.09□□□□□ -1.44
SCN11A-202ENST00000444237 CASKIN1Q8WXD9 1431 aa6.09□□□□□ -1.44
SCN11A-202ENST00000444237 GPATCH3Q96I76 525 aa6.08□□□□□ -1.44
SCN11A-202ENST00000444237 PLB1Q6P1J6 1458 aa6.08□□□□□ -1.44
SCN11A-202ENST00000444237 FIBPO43427 364 aa6.08□□□□□ -1.44
SCN11A-202ENST00000444237 U2AF1L5P0DN76 240 aaPredicted RBP6.08□□□□□ -1.44
SCN11A-202ENST00000444237 U2AF1Q01081 240 aaKnown RBP eCLIP6.08□□□□□ -1.44
SCN11A-202ENST00000444237 RPAINQ86UA6 219 aa6.08□□□□□ -1.44
SCN11A-202ENST00000444237 HOOK1Q9UJC3 728 aaKnown RBP6.08□□□□□ -1.44
SCN11A-202ENST00000444237 CDK13Q14004 1512 aaKnown RBP6.08□□□□□ -1.44
SCN11A-202ENST00000444237 SMARCC1Q92922 1105 aaPredicted RBP6.08□□□□□ -1.44
SCN11A-202ENST00000444237 SNX21Q969T3 373 aa6.08□□□□□ -1.44
SCN11A-202ENST00000444237 CRACR2AQ9BSW2 395 aa6.08□□□□□ -1.44
SCN11A-202ENST00000444237 SRRTQ9BXP5 876 aaKnown RBP6.08□□□□□ -1.44
SCN11A-202ENST00000444237 NUP62CLQ9H1M0 184 aa6.08□□□□□ -1.44
SCN11A-202ENST00000444237 BCL2L12Q9HB09 334 aa6.08□□□□□ -1.44
SCN11A-202ENST00000444237 VGFO15240 615 aaPredicted RBP6.08□□□□□ -1.44
SCN11A-202ENST00000444237 ZSCAN12O43309 604 aa6.08□□□□□ -1.44
SCN11A-202ENST00000444237 CAPN2P17655 700 aa6.08□□□□□ -1.44
SCN11A-202ENST00000444237 PDCP20941 246 aa6.08□□□□□ -1.44
SCN11A-202ENST00000444237 RAB3GAP1Q15042 981 aa6.08□□□□□ -1.44
SCN11A-202ENST00000444237 MAP3K11Q16584 847 aa6.08□□□□□ -1.44
SCN11A-202ENST00000444237 AP1ARQ63HQ0 302 aa6.08□□□□□ -1.44
SCN11A-202ENST00000444237 ERC1Q8IUD2 1116 aa6.08□□□□□ -1.44
SCN11A-202ENST00000444237 CAGE1Q8TC20 777 aa6.08□□□□□ -1.44
SCN11A-202ENST00000444237 GCC1Q96CN9 775 aa6.08□□□□□ -1.44
SCN11A-202ENST00000444237 SUDS3Q9H7L9 328 aaPredicted RBP6.08□□□□□ -1.44
SCN11A-202ENST00000444237 FYCO1Q9BQS8 1478 aa6.08□□□□□ -1.44
SCN11A-202ENST00000444237 ROCK1Q13464 1354 aa6.08□□□□□ -1.44
SCN11A-202ENST00000444237 ST20-MTHFSA0A0A6YYL1 179 aa6.08□□□□□ -1.44
SCN11A-202ENST00000444237 CASQ1P31415 396 aa6.08□□□□□ -1.44
SCN11A-202ENST00000444237 GSDMDP57764 484 aa6.08□□□□□ -1.44
SCN11A-202ENST00000444237 ARFGAP3Q9NP61 516 aa6.08□□□□□ -1.44
SCN11A-202ENST00000444237 TAOK2Q9UL54 1235 aa6.08□□□□□ -1.44
SCN11A-202ENST00000444237 NEK4P51957 841 aa6.07□□□□□ -1.44
SCN11A-202ENST00000444237 NUTM2DQ5VT03 806 aaPredicted RBP6.07□□□□□ -1.44
SCN11A-202ENST00000444237 ERO1AQ96HE7 468 aa6.07□□□□□ -1.44
SCN11A-202ENST00000444237 CBFA2T2O43439 604 aa6.07□□□□□ -1.44
SCN11A-202ENST00000444237 KIF1CO43896 1103 aaKnown RBP6.07□□□□□ -1.44
SCN11A-202ENST00000444237 ZNF445P59923 1031 aa6.07□□□□□ -1.44
SCN11A-202ENST00000444237 PKD2Q13563 968 aa6.07□□□□□ -1.44
SCN11A-202ENST00000444237 SECISBP2LQ93073 1101 aaKnown RBP6.07□□□□□ -1.44
SCN11A-202ENST00000444237 TMX1Q9H3N1 280 aa6.07□□□□□ -1.44
SCN11A-202ENST00000444237 PANK3Q9H999 370 aa6.07□□□□□ -1.44
SCN11A-202ENST00000444237 CTTNBP2Q8WZ74 1663 aa6.07□□□□□ -1.44
SCN11A-202ENST00000444237 MIA2Q96PC5 1412 aa6.07□□□□□ -1.44
SCN11A-202ENST00000444237 KINO60870 393 aaKnown RBP6.07□□□□□ -1.44
SCN11A-202ENST00000444237 IQCEQ6IPM2 695 aa6.07□□□□□ -1.44
SCN11A-202ENST00000444237 SMC5Q8IY18 1101 aa6.07□□□□□ -1.44
SCN11A-202ENST00000444237 ANO2Q9NQ90 1003 aa6.07□□□□□ -1.44
SCN11A-202ENST00000444237 CLIP2Q9UDT6 1046 aa6.07□□□□□ -1.44
SCN11A-202ENST00000444237 CHD1O14646 1710 aa6.07□□□□□ -1.44
SCN11A-202ENST00000444237 NUP155O75694 1391 aa6.07□□□□□ -1.44
SCN11A-202ENST00000444237 RIOK3O14730 519 aaKnown RBP6.07□□□□□ -1.44
SCN11A-202ENST00000444237 ZKSCAN1P17029 563 aaPredicted RBP6.07□□□□□ -1.44
SCN11A-202ENST00000444237 LMOD2Q6P5Q4 547 aa6.07□□□□□ -1.44
SCN11A-202ENST00000444237 SNW1Q13573 536 aaKnown RBP6.06□□□□□ -1.44
SCN11A-202ENST00000444237 RUFY2Q8WXA3 655 aa6.06□□□□□ -1.44
SCN11A-202ENST00000444237 EID1Q9Y6B2 187 aa6.06□□□□□ -1.44
SCN11A-202ENST00000444237 URI1O94763 535 aaPredicted RBP6.06□□□□□ -1.44
SCN11A-202ENST00000444237 SFPQP23246 707 aaKnown RBP eCLIP6.06□□□□□ -1.44
SCN11A-202ENST00000444237 ARID4AP29374 1257 aaPredicted RBP6.06□□□□□ -1.44
SCN11A-202ENST00000444237 SKAP1Q86WV1 359 aa6.06□□□□□ -1.44
SCN11A-202ENST00000444237 POTEDQ86YR6 584 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms