RNA–Protein interactions for RNA: ENST00000444237.2

SCN11A-202, Transcript of sodium voltage-gated channel alpha subunit 11, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SCN11A, Length 5,729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11A-202ENST00000444237 PELP1Q8IZL8 1130 aaKnown RBP8.87□□□□□ -0.99
SCN11A-202ENST00000444237 MYT1Q01538 1121 aa8.85□□□□□ -0.99
SCN11A-202ENST00000444237 NISCHQ9Y2I1 1504 aa8.72□□□□□ -1.01
SCN11A-202ENST00000444237 DCAF8L2P0C7V8 631 aa8.36□□□□□ -1.07
SCN11A-202ENST00000444237 TTBK1Q5TCY1 1321 aaPredicted RBP8.22□□□□□ -1.09
SCN11A-202ENST00000444237 CENPBP07199 599 aaPredicted RBP8.17□□□□□ -1.1
SCN11A-202ENST00000444237 HRCP23327 699 aa8.1□□□□□ -1.11
SCN11A-202ENST00000444237 ZEB1P37275 1124 aaPredicted RBP8.1□□□□□ -1.11
SCN11A-202ENST00000444237 PCGF6Q9BYE7 350 aa8.05□□□□□ -1.12
SCN11A-202ENST00000444237 ERICH6Q7L0X2 663 aa7.99□□□□□ -1.13
SCN11A-202ENST00000444237 CCER1Q8TC90 406 aaPredicted RBP7.94□□□□□ -1.14
SCN11A-202ENST00000444237 SUPT5HO00267 1087 aaKnown RBP7.89□□□□□ -1.15
SCN11A-202ENST00000444237 SHROOM4Q9ULL8 1493 aa7.79□□□□□ -1.16
SCN11A-202ENST00000444237 PPARGC1BQ86YN6 1023 aaKnown RBP7.76□□□□□ -1.17
SCN11A-202ENST00000444237 ABCC9O60706 1549 aa7.73□□□□□ -1.17
SCN11A-202ENST00000444237 TRIM26Q12899 539 aaPredicted RBP7.72□□□□□ -1.17
SCN11A-202ENST00000444237 NEFLP07196 543 aa7.71□□□□□ -1.17
SCN11A-202ENST00000444237 YTHDC1Q96MU7 727 aaKnown RBP7.71□□□□□ -1.18
SCN11A-202ENST00000444237 GTF3C3Q9Y5Q9 886 aa7.7□□□□□ -1.18
SCN11A-202ENST00000444237 ACIN1Q9UKV3 1341 aaKnown RBP7.68□□□□□ -1.18
SCN11A-202ENST00000444237 SCAF1Q9H7N4 1312 aaKnown RBP7.62□□□□□ -1.19
SCN11A-202ENST00000444237 DIEXFQ68CQ4 756 aaKnown RBP7.57□□□□□ -1.2
SCN11A-202ENST00000444237 MYT1LQ9UL68 1186 aa7.57□□□□□ -1.2
SCN11A-202ENST00000444237 RTL5Q5HYW3 569 aaPredicted RBP7.57□□□□□ -1.2
SCN11A-202ENST00000444237 BCL11AQ9H165 835 aa7.56□□□□□ -1.2
SCN11A-202ENST00000444237 CLSPNQ9HAW4 1339 aa7.55□□□□□ -1.2
SCN11A-202ENST00000444237 CCDC180Q9P1Z9 1646 aa7.5□□□□□ -1.21
SCN11A-202ENST00000444237 ANP32EQ9BTT0 268 aa7.49□□□□□ -1.21
SCN11A-202ENST00000444237 GLIPR1L2Q4G1C9 344 aa7.49□□□□□ -1.21
SCN11A-202ENST00000444237 SLC24A1O60721 1099 aa7.49□□□□□ -1.21
SCN11A-202ENST00000444237 APLP2Q06481 763 aa7.46□□□□□ -1.22
SCN11A-202ENST00000444237 PABPN1Q86U42 306 aaKnown RBP eCLIP7.45□□□□□ -1.22
SCN11A-202ENST00000444237 EHMT2Q96KQ7 1210 aa7.45□□□□□ -1.22
SCN11A-202ENST00000444237 NEUROD1Q13562 356 aa7.45□□□□□ -1.22
SCN11A-202ENST00000444237 DAXXQ9UER7 740 aaPredicted RBP7.4□□□□□ -1.22
SCN11A-202ENST00000444237 EIF5BO60841 1220 aaKnown RBP7.39□□□□□ -1.23
SCN11A-202ENST00000444237 FAM9AQ8IZU1 332 aaPredicted RBP7.38□□□□□ -1.23
SCN11A-202ENST00000444237 CHIC1Q5VXU3 224 aa7.37□□□□□ -1.23
SCN11A-202ENST00000444237 CDK11AQ9UQ88 783 aaPredicted RBP7.37□□□□□ -1.23
SCN11A-202ENST00000444237 RANGAP1P46060 587 aaPredicted RBP7.36□□□□□ -1.23
SCN11A-202ENST00000444237 ZNF316A6NFI3 1004 aaPredicted RBP7.33□□□□□ -1.24
SCN11A-202ENST00000444237 TRIM41Q8WV44 630 aa7.32□□□□□ -1.24
SCN11A-202ENST00000444237 DCAF1Q9Y4B6 1507 aa7.32□□□□□ -1.24
SCN11A-202ENST00000444237 BCANQ96GW7 911 aa7.32□□□□□ -1.24
SCN11A-202ENST00000444237 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.31□□□□□ -1.24
SCN11A-202ENST00000444237 PRKCSHP14314 528 aaPredicted RBP7.3□□□□□ -1.24
SCN11A-202ENST00000444237 SCRIBQ14160 1630 aa7.3□□□□□ -1.24
SCN11A-202ENST00000444237 RB1CC1Q8TDY2 1594 aa7.28□□□□□ -1.24
SCN11A-202ENST00000444237 LOC105371045A0A1W2PR82 267 aa7.28□□□□□ -1.24
SCN11A-202ENST00000444237 ANP32AP39687 249 aaKnown RBP7.26□□□□□ -1.25
SCN11A-202ENST00000444237 ZCCHC6Q5VYS8 1495 aaKnown RBP7.22□□□□□ -1.25
SCN11A-202ENST00000444237 CSRNP3Q8WYN3 585 aa7.2□□□□□ -1.26
SCN11A-202ENST00000444237 FKBP8Q14318 412 aa7.19□□□□□ -1.26
SCN11A-202ENST00000444237 ERICH6BQ5W0A0 696 aa7.19□□□□□ -1.26
SCN11A-202ENST00000444237 NACADO15069 1562 aa7.18□□□□□ -1.26
SCN11A-202ENST00000444237 NBR1Q14596 966 aa7.16□□□□□ -1.26
SCN11A-202ENST00000444237 DEKP35659 375 aaKnown RBP7.14□□□□□ -1.27
SCN11A-202ENST00000444237 ZBTB47Q9UFB7 747 aaPredicted RBP7.13□□□□□ -1.27
SCN11A-202ENST00000444237 UBTFP17480 764 aaKnown RBP7.11□□□□□ -1.27
SCN11A-202ENST00000444237 SUPT16HQ9Y5B9 1047 aaKnown RBP7.11□□□□□ -1.27
SCN11A-202ENST00000444237 ANP32CO43423 234 aa7.11□□□□□ -1.27
SCN11A-202ENST00000444237 HNRNPUL2Q1KMD3 747 aaKnown RBP7.1□□□□□ -1.27
SCN11A-202ENST00000444237 MIER1Q8N108 512 aa7.09□□□□□ -1.27
SCN11A-202ENST00000444237 TSHZ2Q9NRE2 1034 aa7.07□□□□□ -1.28
SCN11A-202ENST00000444237 RTN4Q9NQC3 1192 aaKnown RBP7.06□□□□□ -1.28
SCN11A-202ENST00000444237 NEFMP07197 916 aa7.05□□□□□ -1.28
SCN11A-202ENST00000444237 RBM19Q9Y4C8 960 aaKnown RBP7.04□□□□□ -1.28
SCN11A-202ENST00000444237 TNNT2P45379 298 aaPredicted RBP7.04□□□□□ -1.28
SCN11A-202ENST00000444237 AEBP2Q6ZN18 517 aaPredicted RBP7.04□□□□□ -1.28
SCN11A-202ENST00000444237 NOP58Q9Y2X3 529 aaKnown RBP7.04□□□□□ -1.28
SCN11A-202ENST00000444237 NPM2Q86SE8 214 aaKnown RBP7.03□□□□□ -1.28
SCN11A-202ENST00000444237 PPM1GO15355 546 aaPredicted RBP7.03□□□□□ -1.28
SCN11A-202ENST00000444237 ANP32BQ92688 251 aaKnown RBP7.02□□□□□ -1.28
SCN11A-202ENST00000444237 NCLP19338 710 aaKnown RBP7.02□□□□□ -1.29
SCN11A-202ENST00000444237 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.01□□□□□ -1.29
SCN11A-202ENST00000444237 PKNOX2Q96KN3 472 aa7.01□□□□□ -1.29
SCN11A-202ENST00000444237 ATP1B4Q9UN42 357 aaPredicted RBP7.01□□□□□ -1.29
SCN11A-202ENST00000444237 ITGAEP38570 1179 aa7□□□□□ -1.29
SCN11A-202ENST00000444237 NAP1L5Q96NT1 182 aaPredicted RBP6.99□□□□□ -1.29
SCN11A-202ENST00000444237 DDRGK1Q96HY6 314 aa6.98□□□□□ -1.29
SCN11A-202ENST00000444237 RSPH6AQ9H0K4 717 aa6.98□□□□□ -1.29
SCN11A-202ENST00000444237 PODXL2Q9NZ53 605 aa6.98□□□□□ -1.29
SCN11A-202ENST00000444237 CCDC136Q96JN2 1154 aa6.97□□□□□ -1.29
SCN11A-202ENST00000444237 MYO15BQ96JP2 1530 aa6.95□□□□□ -1.3
SCN11A-202ENST00000444237 HSP90AA1P07900 732 aaKnown RBP6.95□□□□□ -1.3
SCN11A-202ENST00000444237 TRIM44Q96DX7 344 aaPredicted RBP6.95□□□□□ -1.3
SCN11A-202ENST00000444237 CDK11BP21127 795 aaKnown RBP6.94□□□□□ -1.3
SCN11A-202ENST00000444237 ANO8Q9HCE9 1232 aaPredicted RBP6.94□□□□□ -1.3
SCN11A-202ENST00000444237 FBLN2P98095 1184 aa6.94□□□□□ -1.3
SCN11A-202ENST00000444237 HNRNPUQ00839 825 aaKnown RBP eCLIP6.94□□□□□ -1.3
SCN11A-202ENST00000444237 VSIG10Q8N0Z9 540 aa6.93□□□□□ -1.3
SCN11A-202ENST00000444237 ERCC6Q03468 1493 aa6.93□□□□□ -1.3
SCN11A-202ENST00000444237 UBE2Q2Q8WVN8 375 aa6.93□□□□□ -1.3
SCN11A-202ENST00000444237 FANCIQ9NVI1 1328 aa6.91□□□□□ -1.3
SCN11A-202ENST00000444237 PPP4R2Q9NY27 417 aa6.91□□□□□ -1.3
SCN11A-202ENST00000444237 TRIM52Q96A61 297 aa6.91□□□□□ -1.3
SCN11A-202ENST00000444237 BAZ1BQ9UIG0 1483 aaKnown RBP6.91□□□□□ -1.3
SCN11A-202ENST00000444237 TRHP20396 242 aaPredicted RBP6.9□□□□□ -1.3
SCN11A-202ENST00000444237 HSP90AA2PQ14568 343 aaPredicted RBP6.89□□□□□ -1.31
SCN11A-202ENST00000444237 L1TD1Q5T7N2 865 aaKnown RBP6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms