RNA–Protein interactions for RNA: ENST00000414480.1

LINC01048-201, Transcript of long intergenic non-protein coding RNA 1048, humanhuman

TSL 2 BASIC

Gene LINC01048, Length 511 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01048-201ENST00000414480 SMYD5Q6GMV2 418 aa5.8□□□□□ -1.48
LINC01048-201ENST00000414480 PTPRTO14522 1441 aa5.8□□□□□ -1.48
LINC01048-201ENST00000414480 MED1Q15648 1581 aaPredicted RBP5.8□□□□□ -1.48
LINC01048-201ENST00000414480 PHLDB1Q86UU1 1377 aa5.8□□□□□ -1.48
LINC01048-201ENST00000414480 SIGLEC1Q9BZZ2 1709 aa5.79□□□□□ -1.48
LINC01048-201ENST00000414480 ARID4BQ4LE39 1312 aaPredicted RBP5.79□□□□□ -1.48
LINC01048-201ENST00000414480 TESPA1A2RU30 521 aaPredicted RBP5.79□□□□□ -1.48
LINC01048-201ENST00000414480 FAM181BA6NEQ2 426 aa5.79□□□□□ -1.48
LINC01048-201ENST00000414480 GPR37O15354 613 aa5.79□□□□□ -1.48
LINC01048-201ENST00000414480 RBM26Q5T8P6 1007 aaKnown RBP5.79□□□□□ -1.48
LINC01048-201ENST00000414480 NLRP7Q8WX94 980 aa5.79□□□□□ -1.48
LINC01048-201ENST00000414480 DXOO77932 396 aaKnown RBP5.78□□□□□ -1.48
LINC01048-201ENST00000414480 HSP90B1P14625 803 aaKnown RBP5.78□□□□□ -1.48
LINC01048-201ENST00000414480 WNT7BP56706 349 aa5.78□□□□□ -1.48
LINC01048-201ENST00000414480 SLC16A10Q8TF71 515 aa5.78□□□□□ -1.48
LINC01048-201ENST00000414480 HPS1Q92902 700 aa5.78□□□□□ -1.48
LINC01048-201ENST00000414480 TTC37Q6PGP7 1564 aa5.77□□□□□ -1.49
LINC01048-201ENST00000414480 USB1Q9BQ65 265 aaKnown RBP5.77□□□□□ -1.49
LINC01048-201ENST00000414480 ARHGEF40Q8TER5 1519 aa5.77□□□□□ -1.49
LINC01048-201ENST00000414480 IQGAP2Q13576 1575 aa5.76□□□□□ -1.49
LINC01048-201ENST00000414480 UGGT2Q9NYU1 1516 aa5.76□□□□□ -1.49
LINC01048-201ENST00000414480 RC3H1Q5TC82 1133 aaKnown RBP5.76□□□□□ -1.49
LINC01048-201ENST00000414480 PHOX2BQ99453 314 aa5.76□□□□□ -1.49
LINC01048-201ENST00000414480 HSPA1LP34931 641 aa5.75□□□□□ -1.49
LINC01048-201ENST00000414480 CEBPAP49715 358 aaPredicted RBP5.75□□□□□ -1.49
LINC01048-201ENST00000414480 NPAS3Q8IXF0 933 aa5.75□□□□□ -1.49
LINC01048-201ENST00000414480 DHX37Q8IY37 1157 aaKnown RBP5.75□□□□□ -1.49
LINC01048-201ENST00000414480 CCDC24Q8N4L8 307 aa5.75□□□□□ -1.49
LINC01048-201ENST00000414480 NXF1Q9UBU9 619 aaKnown RBP5.75□□□□□ -1.49
LINC01048-201ENST00000414480 CARMIL1Q5VZK9 1371 aa5.75□□□□□ -1.49
LINC01048-201ENST00000414480 NEO1Q92859 1461 aa5.75□□□□□ -1.49
LINC01048-201ENST00000414480 ABCA8O94911 1581 aa5.75□□□□□ -1.49
LINC01048-201ENST00000414480 KIAA0556O60303 1618 aa5.74□□□□□ -1.49
LINC01048-201ENST00000414480 UBAP1LF5GYI3 381 aa5.74□□□□□ -1.49
LINC01048-201ENST00000414480 KDM4AO75164 1064 aa5.74□□□□□ -1.49
LINC01048-201ENST00000414480 CD46P15529 392 aa5.74□□□□□ -1.49
LINC01048-201ENST00000414480 HRCP23327 699 aa5.74□□□□□ -1.49
LINC01048-201ENST00000414480 SKOR1P84550 965 aa5.74□□□□□ -1.49
LINC01048-201ENST00000414480 RGS17Q9UGC6 210 aaPredicted RBP5.74□□□□□ -1.49
LINC01048-201ENST00000414480 PREX1Q8TCU6 1659 aa5.74□□□□□ -1.49
LINC01048-201ENST00000414480 ABCA9Q8IUA7 1624 aa5.74□□□□□ -1.49
LINC01048-201ENST00000414480 ARHGEF12Q9NZN5 1544 aa5.74□□□□□ -1.49
LINC01048-201ENST00000414480 FHOD3Q2V2M9 1422 aa5.74□□□□□ -1.49
LINC01048-201ENST00000414480 ALDH1A1P00352 501 aa5.73□□□□□ -1.49
LINC01048-201ENST00000414480 USP46P62068 366 aa5.73□□□□□ -1.49
LINC01048-201ENST00000414480 ZNF326Q5BKZ1 582 aaKnown RBP5.73□□□□□ -1.49
LINC01048-201ENST00000414480 IRF7Q92985 503 aa5.73□□□□□ -1.49
LINC01048-201ENST00000414480 POGZQ7Z3K3 1410 aa5.73□□□□□ -1.49
LINC01048-201ENST00000414480 FANCAO15360 1455 aa5.72□□□□□ -1.49
LINC01048-201ENST00000414480 ZSCAN1Q8NBB4 408 aa5.72□□□□□ -1.49
LINC01048-201ENST00000414480 CCDC9Q9Y3X0 531 aaKnown RBP5.72□□□□□ -1.49
LINC01048-201ENST00000414480 NCOA1Q15788 1441 aa5.72□□□□□ -1.49
LINC01048-201ENST00000414480 UHRF1BP1Q6BDS2 1440 aa5.72□□□□□ -1.49
LINC01048-201ENST00000414480 KIF27Q86VH2 1401 aa5.72□□□□□ -1.49
LINC01048-201ENST00000414480 ZNF335Q9H4Z2 1342 aaPredicted RBP5.72□□□□□ -1.49
LINC01048-201ENST00000414480 GMPRP36959 345 aa5.71□□□□□ -1.5
LINC01048-201ENST00000414480 MLECQ14165 292 aa5.71□□□□□ -1.5
LINC01048-201ENST00000414480 GPIHBP1Q8IV16 184 aa5.71□□□□□ -1.5
LINC01048-201ENST00000414480 AKNAQ7Z591 1439 aa5.71□□□□□ -1.5
LINC01048-201ENST00000414480 RICTORQ6R327 1708 aa5.71□□□□□ -1.5
LINC01048-201ENST00000414480 ATP10BO94823 1461 aa5.71□□□□□ -1.5
LINC01048-201ENST00000414480 FER1L4A9Z1Z3 1794 aa5.7□□□□□ -1.5
LINC01048-201ENST00000414480 ZMYM4Q5VZL5 1548 aa5.7□□□□□ -1.5
LINC01048-201ENST00000414480 HOXA2O43364 376 aa5.7□□□□□ -1.5
LINC01048-201ENST00000414480 JUNDP17535 347 aa5.7□□□□□ -1.5
LINC01048-201ENST00000414480 TRIM46Q7Z4K8 759 aa5.7□□□□□ -1.5
LINC01048-201ENST00000414480 EHBP1Q8NDI1 1231 aa5.7□□□□□ -1.5
LINC01048-201ENST00000414480 DENND4BO75064 1496 aaPredicted RBP5.7□□□□□ -1.5
LINC01048-201ENST00000414480 H3BM21 787 aa5.69□□□□□ -1.5
LINC01048-201ENST00000414480 CAPN5O15484 640 aaPredicted RBP5.69□□□□□ -1.5
LINC01048-201ENST00000414480 SIAH2O43255 324 aa5.69□□□□□ -1.5
LINC01048-201ENST00000414480 BMP1P13497 986 aa5.69□□□□□ -1.5
LINC01048-201ENST00000414480 LORP23490 312 aaPredicted RBP5.69□□□□□ -1.5
LINC01048-201ENST00000414480 KDM2AQ9Y2K7 1162 aa5.69□□□□□ -1.5
LINC01048-201ENST00000414480 WASF2Q9Y6W5 498 aa5.69□□□□□ -1.5
LINC01048-201ENST00000414480 ZFYVE16Q7Z3T8 1539 aa5.69□□□□□ -1.5
LINC01048-201ENST00000414480 SETD1BQ9UPS6 1966 aaKnown RBP5.68□□□□□ -1.5
LINC01048-201ENST00000414480 ALKQ9UM73 1620 aa5.68□□□□□ -1.5
LINC01048-201ENST00000414480 MAP2K5Q13163 448 aa5.68□□□□□ -1.5
LINC01048-201ENST00000414480 HLA-CQ95604 372 aa5.68□□□□□ -1.5
LINC01048-201ENST00000414480 NUDT12Q9BQG2 462 aa5.68□□□□□ -1.5
LINC01048-201ENST00000414480 MAGI2Q86UL8 1455 aa5.68□□□□□ -1.5
LINC01048-201ENST00000414480 EFCAB5A4FU69 1503 aa5.67□□□□□ -1.5
LINC01048-201ENST00000414480 LOC100996750A0A140TA64 210 aa5.66□□□□□ -1.5
LINC01048-201ENST00000414480 ZBTB7CA1YPR0 619 aa5.66□□□□□ -1.5
LINC01048-201ENST00000414480 ARID3CA6NKF2 412 aa5.66□□□□□ -1.5
LINC01048-201ENST00000414480 ZEB1P37275 1124 aaPredicted RBP5.66□□□□□ -1.5
LINC01048-201ENST00000414480 RETREG3Q86VR2 466 aa5.66□□□□□ -1.5
LINC01048-201ENST00000414480 ARID3AQ99856 593 aa5.66□□□□□ -1.5
LINC01048-201ENST00000414480 KRTAP4-6Q9BYQ5 205 aa5.66□□□□□ -1.5
LINC01048-201ENST00000414480 HECW1Q76N89 1606 aa5.66□□□□□ -1.5
LINC01048-201ENST00000414480 TRAPPC8Q9Y2L5 1435 aa5.65□□□□□ -1.5
LINC01048-201ENST00000414480 ATP10AO60312 1499 aa5.65□□□□□ -1.5
LINC01048-201ENST00000414480 VEGFBP49765 207 aa5.65□□□□□ -1.5
LINC01048-201ENST00000414480 MDM2Q00987 491 aaPredicted RBP5.65□□□□□ -1.5
LINC01048-201ENST00000414480 POTEAQ6S8J7 498 aa5.65□□□□□ -1.5
LINC01048-201ENST00000414480 ERBB4Q15303 1308 aa5.65□□□□□ -1.51
LINC01048-201ENST00000414480 C9orf84Q5VXU9 1444 aa5.65□□□□□ -1.51
LINC01048-201ENST00000414480 CAMSAP1Q5T5Y3 1602 aa5.64□□□□□ -1.51
LINC01048-201ENST00000414480 SH3BP2P78314 561 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms