RNA–Protein interactions for RNA: ENST00000409915.8

SF3B1-202, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2 BASIC

Gene SF3B1, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-202ENST00000409915 UGGT1Q9NYU2 1555 aa6.43□□□□□ -1.38
SF3B1-202ENST00000409915 CFAP65Q6ZU64 1925 aaKnown RBP6.42□□□□□ -1.38
SF3B1-202ENST00000409915 E9PCH4 1651 aa6.42□□□□□ -1.38
SF3B1-202ENST00000409915 MFSD10Q14728 455 aa6.42□□□□□ -1.38
SF3B1-202ENST00000409915 ZNF687Q8N1G0 1237 aa6.42□□□□□ -1.38
SF3B1-202ENST00000409915 OXER1Q8TDS5 423 aa6.42□□□□□ -1.38
SF3B1-202ENST00000409915 MINK1Q8N4C8 1332 aaPredicted RBP6.42□□□□□ -1.38
SF3B1-202ENST00000409915 RAB3GAP2Q9H2M9 1393 aa6.42□□□□□ -1.38
SF3B1-202ENST00000409915 NOS1P29475 1434 aa6.42□□□□□ -1.38
SF3B1-202ENST00000409915 SETD5Q9C0A6 1442 aa6.42□□□□□ -1.38
SF3B1-202ENST00000409915 NLRP1Q9C000 1473 aa6.41□□□□□ -1.38
SF3B1-202ENST00000409915 GPR37O15354 613 aa6.41□□□□□ -1.38
SF3B1-202ENST00000409915 DDX27Q96GQ7 796 aaKnown RBP6.41□□□□□ -1.38
SF3B1-202ENST00000409915 SETD1BQ9UPS6 1966 aaKnown RBP6.4□□□□□ -1.38
SF3B1-202ENST00000409915 PIK3C2BO00750 1634 aa6.4□□□□□ -1.38
SF3B1-202ENST00000409915 STRCQ7RTU9 1775 aa6.4□□□□□ -1.38
SF3B1-202ENST00000409915 PPM1GO15355 546 aaPredicted RBP6.4□□□□□ -1.38
SF3B1-202ENST00000409915 BRD1O95696 1058 aa6.4□□□□□ -1.38
SF3B1-202ENST00000409915 BRD2P25440 801 aaKnown RBP6.4□□□□□ -1.38
SF3B1-202ENST00000409915 NEUROD1Q13562 356 aa6.4□□□□□ -1.38
SF3B1-202ENST00000409915 RPRD2Q5VT52 1461 aaKnown RBP6.4□□□□□ -1.39
SF3B1-202ENST00000409915 PDE4AP27815 886 aa6.39□□□□□ -1.39
SF3B1-202ENST00000409915 MAP2K5Q13163 448 aa6.39□□□□□ -1.39
SF3B1-202ENST00000409915 IDI1Q13907 227 aa6.39□□□□□ -1.39
SF3B1-202ENST00000409915 CCDC125Q86Z20 511 aa6.39□□□□□ -1.39
SF3B1-202ENST00000409915 UBE2Q2Q8WVN8 375 aa6.39□□□□□ -1.39
SF3B1-202ENST00000409915 ZNF330Q9Y3S2 320 aaPredicted RBP6.39□□□□□ -1.39
SF3B1-202ENST00000409915 PLA2R1Q13018 1463 aa6.39□□□□□ -1.39
SF3B1-202ENST00000409915 ADGRB3O60242 1522 aa6.39□□□□□ -1.39
SF3B1-202ENST00000409915 UBR1Q8IWV7 1749 aa6.39□□□□□ -1.39
SF3B1-202ENST00000409915 UNCXA6NJT0 531 aa6.38□□□□□ -1.39
SF3B1-202ENST00000409915 CAMK2BQ13554 666 aa6.38□□□□□ -1.39
SF3B1-202ENST00000409915 TTLL12Q14166 644 aaPredicted RBP6.38□□□□□ -1.39
SF3B1-202ENST00000409915 COG6Q9Y2V7 657 aa6.38□□□□□ -1.39
SF3B1-202ENST00000409915 NEURL4Q96JN8 1562 aa6.38□□□□□ -1.39
SF3B1-202ENST00000409915 SPHKAPQ2M3C7 1700 aa6.38□□□□□ -1.39
SF3B1-202ENST00000409915 CLTCL1P53675 1640 aa6.37□□□□□ -1.39
SF3B1-202ENST00000409915 TRPM2O94759 1503 aa6.37□□□□□ -1.39
SF3B1-202ENST00000409915 PTPRTO14522 1441 aa6.37□□□□□ -1.39
SF3B1-202ENST00000409915 RNF166Q96A37 237 aaPredicted RBP6.37□□□□□ -1.39
SF3B1-202ENST00000409915 PCGF6Q9BYE7 350 aa6.37□□□□□ -1.39
SF3B1-202ENST00000409915 IRF6O14896 467 aa6.36□□□□□ -1.39
SF3B1-202ENST00000409915 PSEN2P49810 448 aa6.36□□□□□ -1.39
SF3B1-202ENST00000409915 SH3D19Q5HYK7 790 aa6.36□□□□□ -1.39
SF3B1-202ENST00000409915 NUTM2DQ5VT03 806 aaPredicted RBP6.36□□□□□ -1.39
SF3B1-202ENST00000409915 SND1Q7KZF4 910 aaKnown RBP eCLIP6.36□□□□□ -1.392e-6■□□□□ 10
SF3B1-202ENST00000409915 THEMISQ8N1K5 641 aaPredicted RBP6.36□□□□□ -1.39
SF3B1-202ENST00000409915 MPHOSPH9Q99550 1183 aa6.36□□□□□ -1.39
SF3B1-202ENST00000409915 IVNS1ABPQ9Y6Y0 642 aa6.36□□□□□ -1.39
SF3B1-202ENST00000409915 MYO5BQ9ULV0 1848 aa6.36□□□□□ -1.39
SF3B1-202ENST00000409915 POLR1AO95602 1720 aaPredicted RBP6.36□□□□□ -1.39
SF3B1-202ENST00000409915 TMEM131LA2VDJ0 1609 aa6.36□□□□□ -1.39
SF3B1-202ENST00000409915 SLIT1O75093 1534 aa6.35□□□□□ -1.39
SF3B1-202ENST00000409915 SCAF11Q99590 1463 aaKnown RBP6.35□□□□□ -1.39
SF3B1-202ENST00000409915 ARHGAP23Q9P227 1491 aa6.35□□□□□ -1.39
SF3B1-202ENST00000409915 NPHP4O75161 1426 aaPredicted RBP6.35□□□□□ -1.39
SF3B1-202ENST00000409915 TMEM2Q9UHN6 1383 aa6.35□□□□□ -1.39
SF3B1-202ENST00000409915 TBC1D12O60347 775 aa6.35□□□□□ -1.39
SF3B1-202ENST00000409915 MS4A1P11836 297 aa6.35□□□□□ -1.39
SF3B1-202ENST00000409915 LTKP29376 864 aa6.35□□□□□ -1.39
SF3B1-202ENST00000409915 DMRTA1Q5VZB9 504 aa6.35□□□□□ -1.39
SF3B1-202ENST00000409915 IGSF5Q9NSI5 407 aa6.35□□□□□ -1.39
SF3B1-202ENST00000409915 SLC52A1Q9NWF4 448 aa6.35□□□□□ -1.39
SF3B1-202ENST00000409915 RIMS2Q9UQ26 1411 aa6.34□□□□□ -1.39
SF3B1-202ENST00000409915 EVI5O60447 810 aa6.34□□□□□ -1.39
SF3B1-202ENST00000409915 TXNDC2Q86VQ3 553 aa6.34□□□□□ -1.39
SF3B1-202ENST00000409915 ANKLE2Q86XL3 938 aa6.34□□□□□ -1.39
SF3B1-202ENST00000409915 USTQ9Y2C2 406 aa6.34□□□□□ -1.39
SF3B1-202ENST00000409915 ZFYVE9O95405 1425 aa6.33□□□□□ -1.4
SF3B1-202ENST00000409915 KDM5AP29375 1690 aaKnown RBP6.33□□□□□ -1.4
SF3B1-202ENST00000409915 IQGAP1P46940 1657 aa6.33□□□□□ -1.4
SF3B1-202ENST00000409915 ZNF335Q9H4Z2 1342 aaPredicted RBP6.33□□□□□ -1.4
SF3B1-202ENST00000409915 CLSPNQ9HAW4 1339 aa6.33□□□□□ -1.4
SF3B1-202ENST00000409915 SPDYE5A6NIY4 337 aa6.33□□□□□ -1.4
SF3B1-202ENST00000409915 DPYSL4O14531 572 aa6.33□□□□□ -1.4
SF3B1-202ENST00000409915 LSM11P83369 360 aaKnown RBP eCLIP6.33□□□□□ -1.4
SF3B1-202ENST00000409915 GIGYF2Q6Y7W6 1299 aaKnown RBP6.33□□□□□ -1.4
SF3B1-202ENST00000409915 CALR3Q96L12 384 aaKnown RBP6.33□□□□□ -1.4
SF3B1-202ENST00000409915 CCDC144AA2RUR9 1427 aa6.33□□□□□ -1.4
SF3B1-202ENST00000409915 ZNF326Q5BKZ1 582 aaKnown RBP6.32□□□□□ -1.4
SF3B1-202ENST00000409915 ZNF454Q8N9F8 522 aa6.32□□□□□ -1.4
SF3B1-202ENST00000409915 EID1Q9Y6B2 187 aa6.32□□□□□ -1.4
SF3B1-202ENST00000409915 MED14O60244 1454 aa6.32□□□□□ -1.4
SF3B1-202ENST00000409915 NEXMIFQ5QGS0 1516 aa6.31□□□□□ -1.4
SF3B1-202ENST00000409915 CSB-PGBD3P0DP91 1061 aa6.31□□□□□ -1.4
SF3B1-202ENST00000409915 CANXP27824 592 aaKnown RBP6.31□□□□□ -1.4
SF3B1-202ENST00000409915 SLC26A8Q96RN1 970 aa6.31□□□□□ -1.4
SF3B1-202ENST00000409915 CWC22Q9HCG8 908 aaKnown RBP6.31□□□□□ -1.4
SF3B1-202ENST00000409915 LTBP4Q8N2S1 1624 aa6.31□□□□□ -1.4
SF3B1-202ENST00000409915 KIF1BO60333 1816 aa6.3□□□□□ -1.4
SF3B1-202ENST00000409915 PSDA5PKW4 1024 aaPredicted RBP6.3□□□□□ -1.4
SF3B1-202ENST00000409915 PBX2P40425 430 aa6.3□□□□□ -1.4
SF3B1-202ENST00000409915 PTGER2P43116 358 aa6.3□□□□□ -1.4
SF3B1-202ENST00000409915 FOSBP53539 338 aa6.3□□□□□ -1.4
SF3B1-202ENST00000409915 MAP3K9P80192 1104 aa6.3□□□□□ -1.4
SF3B1-202ENST00000409915 RGL3Q3MIN7 710 aa6.3□□□□□ -1.4
SF3B1-202ENST00000409915 PBXIP1Q96AQ6 731 aa6.3□□□□□ -1.4
SF3B1-202ENST00000409915 ANO8Q9HCE9 1232 aaPredicted RBP6.3□□□□□ -1.4
SF3B1-202ENST00000409915 SPATA31E1Q6ZUB1 1445 aa6.3□□□□□ -1.4
SF3B1-202ENST00000409915 ANKRD30BQ9BXX2 1392 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms