RNA–Protein interactions for RNA: ENST00000409886.3

RGPD3-202, Transcript of RANBP2-like and GRIP domain containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RGPD3, Length 5,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3-202ENST00000409886 EN1Q05925 392 aaPredicted RBP4.38□□□□□ -1.71
RGPD3-202ENST00000409886 VPS8Q8N3P4 1428 aa4.37□□□□□ -1.71
RGPD3-202ENST00000409886 KIF13BQ9NQT8 1826 aa4.37□□□□□ -1.71
RGPD3-202ENST00000409886 TECPR2O15040 1411 aa4.37□□□□□ -1.71
RGPD3-202ENST00000409886 FSTL1Q12841 308 aa4.37□□□□□ -1.71
RGPD3-202ENST00000409886 PRDM10Q9NQV6 1147 aa4.37□□□□□ -1.71
RGPD3-202ENST00000409886 ITSN1Q15811 1721 aa4.37□□□□□ -1.71
RGPD3-202ENST00000409886 SPATA31E1Q6ZUB1 1445 aa4.37□□□□□ -1.71
RGPD3-202ENST00000409886 EZH2Q15910 746 aaKnown RBP4.37□□□□□ -1.71
RGPD3-202ENST00000409886 ABCC6O95255 1503 aa4.37□□□□□ -1.71
RGPD3-202ENST00000409886 SPATA31A5Q5VU36 1347 aa4.37□□□□□ -1.71
RGPD3-202ENST00000409886 SPATA31A7Q8IWB4 1347 aa4.37□□□□□ -1.71
RGPD3-202ENST00000409886 ADAMTS2O95450 1211 aa4.37□□□□□ -1.71
RGPD3-202ENST00000409886 ADAMTS7Q9UKP4 1686 aa4.36□□□□□ -1.71
RGPD3-202ENST00000409886 PLSCR1O15162 318 aa4.36□□□□□ -1.71
RGPD3-202ENST00000409886 SEC24BO95487 1268 aa4.36□□□□□ -1.71
RGPD3-202ENST00000409886 CDCA7LQ96GN5 454 aa4.36□□□□□ -1.71
RGPD3-202ENST00000409886 WWC3Q9ULE0 1092 aa4.36□□□□□ -1.71
RGPD3-202ENST00000409886 KIF1BO60333 1816 aa4.36□□□□□ -1.71
RGPD3-202ENST00000409886 PLIN1O60240 522 aa4.36□□□□□ -1.71
RGPD3-202ENST00000409886 RBM46Q8TBY0 533 aaKnown RBP4.36□□□□□ -1.71
RGPD3-202ENST00000409886 MTFR1LQ9H019 292 aa4.36□□□□□ -1.71
RGPD3-202ENST00000409886 NRXN1Q9ULB1 1477 aa4.36□□□□□ -1.71
RGPD3-202ENST00000409886 SPATA31A3Q5VYP0 1347 aa4.36□□□□□ -1.71
RGPD3-202ENST00000409886 BARGINQ6ZT62 677 aa4.35□□□□□ -1.71
RGPD3-202ENST00000409886 C14orf37Q86TY3 774 aa4.35□□□□□ -1.71
RGPD3-202ENST00000409886 SLC26A8Q96RN1 970 aa4.35□□□□□ -1.71
RGPD3-202ENST00000409886 SYT17Q9BSW7 474 aa4.35□□□□□ -1.71
RGPD3-202ENST00000409886 PANK2Q9BZ23 570 aa4.35□□□□□ -1.71
RGPD3-202ENST00000409886 USP54Q70EL1 1684 aa4.35□□□□□ -1.71
RGPD3-202ENST00000409886 ERBB4Q15303 1308 aa4.35□□□□□ -1.71
RGPD3-202ENST00000409886 COL13A1Q5TAT6 717 aaPredicted RBP4.35□□□□□ -1.71
RGPD3-202ENST00000409886 FAM9BQ8IZU0 186 aa4.35□□□□□ -1.71
RGPD3-202ENST00000409886 UBE2Q2Q8WVN8 375 aa4.35□□□□□ -1.71
RGPD3-202ENST00000409886 STAG3Q9UJ98 1225 aa4.35□□□□□ -1.71
RGPD3-202ENST00000409886 ANKARQ7Z5J8 1434 aa4.34□□□□□ -1.71
RGPD3-202ENST00000409886 IDI1Q13907 227 aa4.34□□□□□ -1.71
RGPD3-202ENST00000409886 JARID2Q92833 1246 aaPredicted RBP4.34□□□□□ -1.71
RGPD3-202ENST00000409886 AMOTL2Q9Y2J4 779 aa4.34□□□□□ -1.71
RGPD3-202ENST00000409886 FREM2Q5SZK8 3169 aa4.34□□□□□ -1.72
RGPD3-202ENST00000409886 KIAA1551Q9HCM1 1747 aa4.34□□□□□ -1.72
RGPD3-202ENST00000409886 HTTP42858 3142 aa4.34□□□□□ -1.72
RGPD3-202ENST00000409886 ARFGEF1Q9Y6D6 1849 aa4.33□□□□□ -1.72
RGPD3-202ENST00000409886 PLEKHG2Q9H7P9 1386 aa4.33□□□□□ -1.72
RGPD3-202ENST00000409886 SLC16A10Q8TF71 515 aa4.33□□□□□ -1.72
RGPD3-202ENST00000409886 USP19O94966 1318 aa4.33□□□□□ -1.72
RGPD3-202ENST00000409886 LY75O60449 1722 aa4.33□□□□□ -1.72
RGPD3-202ENST00000409886 OVOS2A0A0G2JMS6 1433 aa4.33□□□□□ -1.72
RGPD3-202ENST00000409886 OVOS2A0A0J9YW53 1432 aa4.33□□□□□ -1.72
RGPD3-202ENST00000409886 OVOS2Q6IE36 1432 aa4.33□□□□□ -1.72
RGPD3-202ENST00000409886 FRAT2O75474 233 aaPredicted RBP4.33□□□□□ -1.72
RGPD3-202ENST00000409886 THRAP3Q9Y2W1 955 aaKnown RBP4.33□□□□□ -1.72
RGPD3-202ENST00000409886 FRYQ5TBA9 3013 aa4.33□□□□□ -1.72
RGPD3-202ENST00000409886 COL18A1P39060 1754 aa4.33□□□□□ -1.72
RGPD3-202ENST00000409886 POGKQ9P215 609 aa4.32□□□□□ -1.72
RGPD3-202ENST00000409886 HMGB2P26583 209 aaKnown RBP4.32□□□□□ -1.72
RGPD3-202ENST00000409886 SPINK5Q9NQ38 1064 aaPredicted RBP4.32□□□□□ -1.72
RGPD3-202ENST00000409886 DDX60Q8IY21 1712 aaKnown RBP4.32□□□□□ -1.72
RGPD3-202ENST00000409886 FHDC1Q9C0D6 1143 aaPredicted RBP4.32□□□□□ -1.72
RGPD3-202ENST00000409886 PRKRIP1Q9H875 184 aaPredicted RBP4.32□□□□□ -1.72
RGPD3-202ENST00000409886 AK9Q5TCS8 1911 aa4.32□□□□□ -1.72
RGPD3-202ENST00000409886 GPBP1L1Q9HC44 474 aaPredicted RBP4.32□□□□□ -1.72
RGPD3-202ENST00000409886 EXOC6Q8TAG9 804 aa4.32□□□□□ -1.72
RGPD3-202ENST00000409886 ZMYND15Q9H091 742 aa4.32□□□□□ -1.72
RGPD3-202ENST00000409886 ZNF777Q9ULD5 760 aaPredicted RBP4.32□□□□□ -1.72
RGPD3-202ENST00000409886 ANKRD30BQ9BXX2 1392 aa4.31□□□□□ -1.72
RGPD3-202ENST00000409886 TSPY4P0CV99 314 aa4.31□□□□□ -1.72
RGPD3-202ENST00000409886 TSPY10P0CW01 314 aa4.31□□□□□ -1.72
RGPD3-202ENST00000409886 FRYLO94915 3013 aa4.31□□□□□ -1.72
RGPD3-202ENST00000409886 RNF123Q5XPI4 1314 aa4.31□□□□□ -1.72
RGPD3-202ENST00000409886 KIF3CO14782 793 aa4.31□□□□□ -1.72
RGPD3-202ENST00000409886 TOMM70O94826 608 aa4.31□□□□□ -1.72
RGPD3-202ENST00000409886 SPATA31A1Q5TZJ5 1347 aa4.31□□□□□ -1.72
RGPD3-202ENST00000409886 APBA3O96018 575 aa4.31□□□□□ -1.72
RGPD3-202ENST00000409886 PSME1Q06323 249 aa4.31□□□□□ -1.72
RGPD3-202ENST00000409886 FRAT1Q92837 279 aaPredicted RBP4.31□□□□□ -1.72
RGPD3-202ENST00000409886 GCC1Q96CN9 775 aa4.3□□□□□ -1.72
RGPD3-202ENST00000409886 CHAMP1Q96JM3 812 aa4.3□□□□□ -1.72
RGPD3-202ENST00000409886 ARXQ96QS3 562 aa4.3□□□□□ -1.72
RGPD3-202ENST00000409886 PITPNM2Q9BZ72 1349 aa4.3□□□□□ -1.72
RGPD3-202ENST00000409886 MLLT1Q03111 559 aaPredicted RBP4.3□□□□□ -1.72
RGPD3-202ENST00000409886 STK32BQ9NY57 414 aa4.3□□□□□ -1.72
RGPD3-202ENST00000409886 EIF3AQ14152 1382 aaKnown RBP4.3□□□□□ -1.72
RGPD3-202ENST00000409886 NPM2Q86SE8 214 aaKnown RBP4.3□□□□□ -1.72
RGPD3-202ENST00000409886 NOP58Q9Y2X3 529 aaKnown RBP4.3□□□□□ -1.72
RGPD3-202ENST00000409886 BRCA1P38398 1863 aaKnown RBP4.3□□□□□ -1.72
RGPD3-202ENST00000409886 CFAP47Q6ZTR5 3102 aa4.3□□□□□ -1.72
RGPD3-202ENST00000409886 NAIPQ13075 1403 aa4.3□□□□□ -1.72
RGPD3-202ENST00000409886 BOD1L1Q8NFC6 3051 aa4.29□□□□□ -1.72
RGPD3-202ENST00000409886 TNNQ9UQP3 1299 aa4.29□□□□□ -1.72
RGPD3-202ENST00000409886 RGPD8O14715 1765 aaPredicted RBP4.29□□□□□ -1.72
RGPD3-202ENST00000409886 SIRT1Q96EB6 747 aa4.29□□□□□ -1.72
RGPD3-202ENST00000409886 EIF5BO60841 1220 aaKnown RBP4.29□□□□□ -1.72
RGPD3-202ENST00000409886 BTAF1O14981 1849 aa4.29□□□□□ -1.72
RGPD3-202ENST00000409886 CAPN15O75808 1086 aa4.28□□□□□ -1.72
RGPD3-202ENST00000409886 HSPA5P11021 654 aaKnown RBP4.28□□□□□ -1.72
RGPD3-202ENST00000409886 GPR162Q16538 588 aa4.28□□□□□ -1.72
RGPD3-202ENST00000409886 SSH2Q76I76 1423 aa4.28□□□□□ -1.72
RGPD3-202ENST00000409886 METP08581 1390 aa4.28□□□□□ -1.72
RGPD3-202ENST00000409886 FAM208AQ9UK61 1670 aaKnown RBP4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms