RNA–Protein interactions for RNA: ENST00000394084.5

GAPVD1-205, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 1 (best) BASIC

Gene GAPVD1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-205ENST00000394084 TXNDC2Q86VQ3 553 aa17.46■□□□□ 0.39
GAPVD1-205ENST00000394084 FOXD4L1Q9NU39 408 aa17.46■□□□□ 0.39
GAPVD1-205ENST00000394084 IFT57Q9NWB7 429 aa17.46■□□□□ 0.39
GAPVD1-205ENST00000394084 RBM25P49756 843 aaKnown RBP17.45■□□□□ 0.38
GAPVD1-205ENST00000394084 CALD1Q05682 793 aaKnown RBP17.45■□□□□ 0.38
GAPVD1-205ENST00000394084 SIRT2Q8IXJ6 389 aa17.45■□□□□ 0.38
GAPVD1-205ENST00000394084 ZNF428Q96B54 188 aa17.45■□□□□ 0.38
GAPVD1-205ENST00000394084 CDC42BPGQ6DT37 1551 aa17.45■□□□□ 0.38
GAPVD1-205ENST00000394084 BMP2KLQ5H9B9 411 aa17.45■□□□□ 0.38
GAPVD1-205ENST00000394084 GOLGA6L3A6NEY3 463 aa17.44■□□□□ 0.38
GAPVD1-205ENST00000394084 HSP90AB1P08238 724 aaKnown RBP17.44■□□□□ 0.38
GAPVD1-205ENST00000394084 FAM43AQ8N2R8 423 aa17.44■□□□□ 0.38
GAPVD1-205ENST00000394084 BRPF1P55201 1214 aaPredicted RBP17.44■□□□□ 0.38
GAPVD1-205ENST00000394084 CYB5RLQ6IPT4 315 aa17.44■□□□□ 0.38
GAPVD1-205ENST00000394084 GCC1Q96CN9 775 aa17.44■□□□□ 0.38
GAPVD1-205ENST00000394084 ZNF692Q9BU19 519 aaPredicted RBP17.44■□□□□ 0.38
GAPVD1-205ENST00000394084 WASLO00401 505 aaPredicted RBP17.44■□□□□ 0.38
GAPVD1-205ENST00000394084 ATP7BP35670 1465 aa17.44■□□□□ 0.38
GAPVD1-205ENST00000394084 RIMS2Q9UQ26 1411 aa17.43■□□□□ 0.38
GAPVD1-205ENST00000394084 XRCC6P12956 609 aaKnown RBP eCLIP17.43■□□□□ 0.38
GAPVD1-205ENST00000394084 ARHGAP45Q92619 1136 aa17.43■□□□□ 0.38
GAPVD1-205ENST00000394084 COG3Q96JB2 828 aa17.42■□□□□ 0.38
GAPVD1-205ENST00000394084 ZNF853P0CG23 659 aa17.42■□□□□ 0.38
GAPVD1-205ENST00000394084 TBC1D9Q6ZT07 1266 aa17.42■□□□□ 0.38
GAPVD1-205ENST00000394084 PTCH1Q13635 1447 aa17.42■□□□□ 0.38
GAPVD1-205ENST00000394084 FAM69CQ0P6D2 419 aa17.42■□□□□ 0.38
GAPVD1-205ENST00000394084 NUDT16Q96DE0 195 aaKnown RBP17.42■□□□□ 0.38
GAPVD1-205ENST00000394084 PANK2Q9BZ23 570 aa17.42■□□□□ 0.38
GAPVD1-205ENST00000394084 RBM42Q9BTD8 480 aaKnown RBP17.41■□□□□ 0.38
GAPVD1-205ENST00000394084 CHMP4BQ9H444 224 aaKnown RBP17.41■□□□□ 0.38
GAPVD1-205ENST00000394084 ABCC4O15439 1325 aa17.41■□□□□ 0.38
GAPVD1-205ENST00000394084 A2ML1A8K2U0 1454 aa17.41■□□□□ 0.38
GAPVD1-205ENST00000394084 CD2BP2O95400 341 aaKnown RBP17.41■□□□□ 0.38
GAPVD1-205ENST00000394084 CFAP44Q96MT7 982 aa17.41■□□□□ 0.38
GAPVD1-205ENST00000394084 HSP90AA1P07900 732 aaKnown RBP17.4■□□□□ 0.38
GAPVD1-205ENST00000394084 KIF2CQ99661 725 aa17.4■□□□□ 0.38
GAPVD1-205ENST00000394084 EDC4Q6P2E9 1401 aaKnown RBP17.4■□□□□ 0.38
GAPVD1-205ENST00000394084 KRT24Q2M2I5 525 aa17.4■□□□□ 0.38
GAPVD1-205ENST00000394084 SNX21Q969T3 373 aa17.4■□□□□ 0.38
GAPVD1-205ENST00000394084 PIK3R4Q99570 1358 aa17.39■□□□□ 0.37
GAPVD1-205ENST00000394084 METP08581 1390 aa17.39■□□□□ 0.37
GAPVD1-205ENST00000394084 AEBP1Q8IUX7 1158 aa17.39■□□□□ 0.37
GAPVD1-205ENST00000394084 RRAGDQ9NQL2 400 aaPredicted RBP17.39■□□□□ 0.37
GAPVD1-205ENST00000394084 CPSF1Q10570 1443 aaKnown RBP17.39■□□□□ 0.37
GAPVD1-205ENST00000394084 LMOD3Q0VAK6 560 aa17.38■□□□□ 0.37
GAPVD1-205ENST00000394084 TNPO1Q92973 898 aaKnown RBP17.38■□□□□ 0.37
GAPVD1-205ENST00000394084 API5Q9BZZ5 524 aaKnown RBP17.38■□□□□ 0.37
GAPVD1-205ENST00000394084 FSD2A1L4K1 749 aa17.38■□□□□ 0.37
GAPVD1-205ENST00000394084 EIF5BO60841 1220 aaKnown RBP17.38■□□□□ 0.37
GAPVD1-205ENST00000394084 CPS1P31327 1500 aa17.37■□□□□ 0.37
GAPVD1-205ENST00000394084 DLC1Q96QB1 1528 aa17.37■□□□□ 0.37
GAPVD1-205ENST00000394084 NCOA3Q9Y6Q9 1424 aa17.37■□□□□ 0.37
GAPVD1-205ENST00000394084 DDX11L8A8MPP1 907 aa17.37■□□□□ 0.37
GAPVD1-205ENST00000394084 DDIT3P35638 169 aa17.37■□□□□ 0.37
GAPVD1-205ENST00000394084 CDK12Q9NYV4 1490 aaPredicted RBP17.37■□□□□ 0.37
GAPVD1-205ENST00000394084 NUTM2FA1L443 756 aa17.37■□□□□ 0.37
GAPVD1-205ENST00000394084 CCDC61Q9Y6R9 512 aa17.36■□□□□ 0.37
GAPVD1-205ENST00000394084 APBB1O00213 710 aa17.36■□□□□ 0.37
GAPVD1-205ENST00000394084 SOX12O15370 315 aa17.36■□□□□ 0.37
GAPVD1-205ENST00000394084 SULT6B1Q6IMI4 303 aa17.36■□□□□ 0.37
GAPVD1-205ENST00000394084 C16orf71Q8IYS4 520 aaPredicted RBP17.36■□□□□ 0.37
GAPVD1-205ENST00000394084 GSPT1P15170 499 aaKnown RBP17.35■□□□□ 0.37
GAPVD1-205ENST00000394084 CDC45O75419 566 aa17.34■□□□□ 0.37
GAPVD1-205ENST00000394084 DLG5Q8TDM6 1919 aa17.34■□□□□ 0.37
GAPVD1-205ENST00000394084 AATKQ6ZMQ8 1374 aa17.34■□□□□ 0.37
GAPVD1-205ENST00000394084 MCM10Q7L590 875 aa17.34■□□□□ 0.37
GAPVD1-205ENST00000394084 K7ELQ4 463 aaPredicted RBP17.33■□□□□ 0.37
GAPVD1-205ENST00000394084 PLEKHM2Q8IWE5 1019 aa17.33■□□□□ 0.37
GAPVD1-205ENST00000394084 TSPOAP1O95153 1857 aa17.33■□□□□ 0.36
GAPVD1-205ENST00000394084 EIF4A2Q14240 407 aaKnown RBP17.32■□□□□ 0.36
GAPVD1-205ENST00000394084 OTUD7AQ8TE49 926 aaPredicted RBP17.32■□□□□ 0.36
GAPVD1-205ENST00000394084 PRR36Q9H6K5 1346 aa17.32■□□□□ 0.36
GAPVD1-205ENST00000394084 GAS2L2Q8NHY3 880 aa17.32■□□□□ 0.36
GAPVD1-205ENST00000394084 SETD1AO15047 1707 aaKnown RBP17.32■□□□□ 0.36
GAPVD1-205ENST00000394084 RAB3GAP1Q15042 981 aa17.32■□□□□ 0.36
GAPVD1-205ENST00000394084 GBP4Q96PP9 640 aa17.32■□□□□ 0.36
GAPVD1-205ENST00000394084 SMARCA5O60264 1052 aaPredicted RBP17.31■□□□□ 0.36
GAPVD1-205ENST00000394084 DCTPP1Q9H773 170 aa17.31■□□□□ 0.36
GAPVD1-205ENST00000394084 CIZ1Q9ULV3 898 aaPredicted RBP17.31■□□□□ 0.36
GAPVD1-205ENST00000394084 SSFA2P28290 1259 aa17.3■□□□□ 0.36
GAPVD1-205ENST00000394084 MRE11P49959 708 aa17.3■□□□□ 0.36
GAPVD1-205ENST00000394084 GRPEL1Q9HAV7 217 aa17.3■□□□□ 0.36
GAPVD1-205ENST00000394084 MIS18AQ9NYP9 233 aa17.3■□□□□ 0.36
GAPVD1-205ENST00000394084 KNDC1Q76NI1 1749 aa17.29■□□□□ 0.36
GAPVD1-205ENST00000394084 ESF1Q9H501 851 aaKnown RBP17.29■□□□□ 0.36
GAPVD1-205ENST00000394084 SPATA31D1Q6ZQQ2 1576 aa17.29■□□□□ 0.36
GAPVD1-205ENST00000394084 TTC22Q5TAA0 569 aa17.29■□□□□ 0.36
GAPVD1-205ENST00000394084 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.29■□□□□ 0.36
GAPVD1-205ENST00000394084 HSP90AB2PQ58FF8 381 aa17.28■□□□□ 0.36
GAPVD1-205ENST00000394084 INTS3Q68E01 1043 aaKnown RBP17.28■□□□□ 0.36
GAPVD1-205ENST00000394084 PPP6R1Q9UPN7 881 aa17.28■□□□□ 0.36
GAPVD1-205ENST00000394084 NRXN3Q9Y4C0 1643 aa17.28■□□□□ 0.36
GAPVD1-205ENST00000394084 ANKRD44Q8N8A2 993 aa17.28■□□□□ 0.36
GAPVD1-205ENST00000394084 MEIS3Q99687 375 aa17.27■□□□□ 0.36
GAPVD1-205ENST00000394084 MSH6P52701 1360 aa17.27■□□□□ 0.35
GAPVD1-205ENST00000394084 CEP85Q6P2H3 762 aa17.26■□□□□ 0.35
GAPVD1-205ENST00000394084 GAS2L3Q86XJ1 694 aa17.26■□□□□ 0.35
GAPVD1-205ENST00000394084 TTC21BQ7Z4L5 1316 aa17.26■□□□□ 0.35
GAPVD1-205ENST00000394084 CHL1O00533 1208 aa17.26■□□□□ 0.35
GAPVD1-205ENST00000394084 ATP10DQ9P241 1426 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms