RNA–Protein interactions for RNA: ENST00000392343.3

CCDC57-203, Transcript of coiled-coil domain containing 57, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC57, Length 2,896 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-203ENST00000392343 CDC45O75419 566 aa17.32■□□□□ 0.36
CCDC57-203ENST00000392343 GLIPR1L2Q4G1C9 344 aa17.32■□□□□ 0.36
CCDC57-203ENST00000392343 C8orf58Q8NAV2 365 aa17.32■□□□□ 0.36
CCDC57-203ENST00000392343 OTUD7AQ8TE49 926 aaPredicted RBP17.32■□□□□ 0.36
CCDC57-203ENST00000392343 HDGFL2Q7Z4V5 671 aaPredicted RBP17.32■□□□□ 0.36
CCDC57-203ENST00000392343 CDK19Q9BWU1 502 aa17.32■□□□□ 0.36
CCDC57-203ENST00000392343 POLKQ9UBT6 870 aa17.32■□□□□ 0.36
CCDC57-203ENST00000392343 RRP9O43818 475 aaKnown RBP17.31■□□□□ 0.36
CCDC57-203ENST00000392343 TWISTNBQ3B726 338 aaPredicted RBP17.31■□□□□ 0.36
CCDC57-203ENST00000392343 FOXD4L5Q5VV16 416 aaPredicted RBP17.31■□□□□ 0.36
CCDC57-203ENST00000392343 FOXD4L4Q8WXT5 416 aaPredicted RBP17.31■□□□□ 0.36
CCDC57-203ENST00000392343 EMILIN1Q9Y6C2 1016 aa17.31■□□□□ 0.36
CCDC57-203ENST00000392343 CFAP74Q9C0B2 1584 aa17.31■□□□□ 0.36
CCDC57-203ENST00000392343 RAPGEF3O95398 923 aa17.3■□□□□ 0.36
CCDC57-203ENST00000392343 PLEKHM2Q8IWE5 1019 aa17.3■□□□□ 0.36
CCDC57-203ENST00000392343 LMTK2Q8IWU2 1503 aa17.3■□□□□ 0.36
CCDC57-203ENST00000392343 KIAA1211Q6ZU35 1233 aa17.3■□□□□ 0.36
CCDC57-203ENST00000392343 ASXL2Q76L83 1435 aa17.3■□□□□ 0.36
CCDC57-203ENST00000392343 SMARCA5O60264 1052 aaPredicted RBP17.3■□□□□ 0.36
CCDC57-203ENST00000392343 NFE2L2Q16236 605 aa17.3■□□□□ 0.36
CCDC57-203ENST00000392343 ANP32BQ92688 251 aaKnown RBP17.29■□□□□ 0.36
CCDC57-203ENST00000392343 CCDC173Q0VFZ6 552 aa17.29■□□□□ 0.36
CCDC57-203ENST00000392343 KLHL40Q2TBA0 621 aa17.29■□□□□ 0.36
CCDC57-203ENST00000392343 ZGPATQ8N5A5 531 aaKnown RBP17.29■□□□□ 0.36
CCDC57-203ENST00000392343 ZRANB1Q9UGI0 708 aa17.29■□□□□ 0.36
CCDC57-203ENST00000392343 LRRC7Q96NW7 1537 aa17.29■□□□□ 0.36
CCDC57-203ENST00000392343 ZMYND15Q9H091 742 aa17.28■□□□□ 0.36
CCDC57-203ENST00000392343 RBM27Q9P2N5 1060 aaKnown RBP17.28■□□□□ 0.36
CCDC57-203ENST00000392343 CD163L1Q9NR16 1453 aa17.28■□□□□ 0.36
CCDC57-203ENST00000392343 MED14O60244 1454 aa17.27■□□□□ 0.36
CCDC57-203ENST00000392343 KRT24Q2M2I5 525 aa17.27■□□□□ 0.36
CCDC57-203ENST00000392343 CALD1Q05682 793 aaKnown RBP17.27■□□□□ 0.36
CCDC57-203ENST00000392343 PRPF40AO75400 957 aaKnown RBP17.26■□□□□ 0.35
CCDC57-203ENST00000392343 PTMSP20962 102 aa17.26■□□□□ 0.35
CCDC57-203ENST00000392343 GNAI1P63096 354 aa17.26■□□□□ 0.35
CCDC57-203ENST00000392343 WAPLQ7Z5K2 1190 aa17.26■□□□□ 0.35
CCDC57-203ENST00000392343 PNPLA6Q8IY17 1366 aa17.26■□□□□ 0.35
CCDC57-203ENST00000392343 ABCC4O15439 1325 aa17.26■□□□□ 0.35
CCDC57-203ENST00000392343 MSNP26038 577 aaKnown RBP17.26■□□□□ 0.35
CCDC57-203ENST00000392343 RBM10P98175 930 aaKnown RBP17.26■□□□□ 0.35
CCDC57-203ENST00000392343 ZSCAN23Q3MJ62 389 aa17.26■□□□□ 0.35
CCDC57-203ENST00000392343 ZSCAN30Q86W11 494 aa17.26■□□□□ 0.35
CCDC57-203ENST00000392343 ARHGAP45Q92619 1136 aa17.26■□□□□ 0.35
CCDC57-203ENST00000392343 PPP1R9BQ96SB3 815 aa17.26■□□□□ 0.35
CCDC57-203ENST00000392343 RBSNQ9H1K0 784 aa17.26■□□□□ 0.35
CCDC57-203ENST00000392343 BRPF1P55201 1214 aaPredicted RBP17.25■□□□□ 0.35
CCDC57-203ENST00000392343 USP26Q9BXU7 913 aa17.25■□□□□ 0.35
CCDC57-203ENST00000392343 NEXMIFQ5QGS0 1516 aa17.25■□□□□ 0.35
CCDC57-203ENST00000392343 SIGLEC1Q9BZZ2 1709 aa17.25■□□□□ 0.35
CCDC57-203ENST00000392343 TTC22Q5TAA0 569 aa17.25■□□□□ 0.35
CCDC57-203ENST00000392343 LMBRD1Q9NUN5 540 aa17.25■□□□□ 0.35
CCDC57-203ENST00000392343 RABEP1Q15276 862 aa17.24■□□□□ 0.35
CCDC57-203ENST00000392343 CHMP4BQ9H444 224 aaKnown RBP17.24■□□□□ 0.35
CCDC57-203ENST00000392343 FAM135BQ49AJ0 1406 aa17.24■□□□□ 0.35
CCDC57-203ENST00000392343 FRMPD1Q5SYB0 1578 aa17.24■□□□□ 0.35
CCDC57-203ENST00000392343 PRIM1P49642 420 aaKnown RBP17.24■□□□□ 0.35
CCDC57-203ENST00000392343 PKNOX2Q96KN3 472 aa17.24■□□□□ 0.35
CCDC57-203ENST00000392343 RRS1Q15050 365 aaKnown RBP17.23■□□□□ 0.35
CCDC57-203ENST00000392343 ZNF428Q96B54 188 aa17.23■□□□□ 0.35
CCDC57-203ENST00000392343 IFT57Q9NWB7 429 aa17.23■□□□□ 0.35
CCDC57-203ENST00000392343 ABCC3O15438 1527 aa17.23■□□□□ 0.35
CCDC57-203ENST00000392343 SDSP20132 328 aa17.23■□□□□ 0.35
CCDC57-203ENST00000392343 PTCH1Q13635 1447 aa17.23■□□□□ 0.35
CCDC57-203ENST00000392343 NME9Q86XW9 330 aa17.22■□□□□ 0.35
CCDC57-203ENST00000392343 DCTPP1Q9H773 170 aa17.22■□□□□ 0.35
CCDC57-203ENST00000392343 ZBTB7CA1YPR0 619 aa17.22■□□□□ 0.35
CCDC57-203ENST00000392343 CLEC17AQ6ZS10 378 aa17.21■□□□□ 0.35
CCDC57-203ENST00000392343 GPT2Q8TD30 523 aa17.21■□□□□ 0.35
CCDC57-203ENST00000392343 API5Q9BZZ5 524 aaKnown RBP17.21■□□□□ 0.35
CCDC57-203ENST00000392343 NSFL1CQ9UNZ2 370 aaKnown RBP17.21■□□□□ 0.35
CCDC57-203ENST00000392343 R3HCC1Q9Y3T6 440 aaKnown RBP17.21■□□□□ 0.35
CCDC57-203ENST00000392343 YTHDC2Q9H6S0 1430 aaKnown RBP17.21■□□□□ 0.35
CCDC57-203ENST00000392343 ZNF853P0CG23 659 aa17.21■□□□□ 0.35
CCDC57-203ENST00000392343 NUCB2P80303 420 aa17.21■□□□□ 0.35
CCDC57-203ENST00000392343 XPCQ01831 940 aaPredicted RBP17.21■□□□□ 0.35
CCDC57-203ENST00000392343 FBXO31Q5XUX0 539 aaPredicted RBP17.21■□□□□ 0.35
CCDC57-203ENST00000392343 PIK3R4Q99570 1358 aa17.21■□□□□ 0.34
CCDC57-203ENST00000392343 PTPRMP28827 1452 aa17.2■□□□□ 0.34
CCDC57-203ENST00000392343 NOL8Q76FK4 1167 aaKnown RBP17.2■□□□□ 0.34
CCDC57-203ENST00000392343 IL13P35225 146 aa17.2■□□□□ 0.34
CCDC57-203ENST00000392343 FOXD4L6Q3SYB3 417 aaPredicted RBP17.2■□□□□ 0.34
CCDC57-203ENST00000392343 INTS3Q68E01 1043 aaKnown RBP17.2■□□□□ 0.34
CCDC57-203ENST00000392343 FOXD4L3Q6VB84 417 aaPredicted RBP17.2■□□□□ 0.34
CCDC57-203ENST00000392343 CFAP44Q96MT7 982 aa17.2■□□□□ 0.34
CCDC57-203ENST00000392343 ZDHHC9Q9Y397 364 aa17.2■□□□□ 0.34
CCDC57-203ENST00000392343 NCKAP5LQ9HCH0 1330 aa17.2■□□□□ 0.34
CCDC57-203ENST00000392343 TPM2P07951 284 aa17.19■□□□□ 0.34
CCDC57-203ENST00000392343 ZNF445P59923 1031 aa17.19■□□□□ 0.34
CCDC57-203ENST00000392343 TSHZ3Q63HK5 1081 aa17.19■□□□□ 0.34
CCDC57-203ENST00000392343 ARID3AQ99856 593 aa17.19■□□□□ 0.34
CCDC57-203ENST00000392343 CYP2E1P05181 493 aaPredicted RBP17.18■□□□□ 0.34
CCDC57-203ENST00000392343 NPM1P06748 294 aaKnown RBP eCLIP17.18■□□□□ 0.34
CCDC57-203ENST00000392343 RNF214Q8ND24 703 aa17.18■□□□□ 0.34
CCDC57-203ENST00000392343 STAG3Q9UJ98 1225 aa17.18■□□□□ 0.34
CCDC57-203ENST00000392343 SYCE3A1L190 88 aa17.18■□□□□ 0.34
CCDC57-203ENST00000392343 OFD1O75665 1012 aa17.18■□□□□ 0.34
CCDC57-203ENST00000392343 HECW2Q9P2P5 1572 aa17.18■□□□□ 0.34
CCDC57-203ENST00000392343 TPRNQ4KMQ1 711 aa17.18■□□□□ 0.34
CCDC57-203ENST00000392343 POGZQ7Z3K3 1410 aa17.17■□□□□ 0.34
CCDC57-203ENST00000392343 MEIS3Q99687 375 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms