RNA–Protein interactions for RNA: ENST00000391941.6

ERCC2-201, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC2, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-201ENST00000391941 WAPLQ7Z5K2 1190 aa22.4■■□□□ 1.18
ERCC2-201ENST00000391941 MBIPQ9NS73 344 aa22.4■■□□□ 1.18
ERCC2-201ENST00000391941 HSP90AA2PQ14568 343 aaPredicted RBP22.4■■□□□ 1.18
ERCC2-201ENST00000391941 ALDH1L2Q3SY69 923 aa22.39■■□□□ 1.18
ERCC2-201ENST00000391941 CDK19Q9BWU1 502 aa22.39■■□□□ 1.18
ERCC2-201ENST00000391941 NCKAP5LQ9HCH0 1330 aa22.39■■□□□ 1.18
ERCC2-201ENST00000391941 TERF2IPQ9NYB0 399 aa22.39■■□□□ 1.17
ERCC2-201ENST00000391941 ABCC3O15438 1527 aa22.38■■□□□ 1.17
ERCC2-201ENST00000391941 POLKQ9UBT6 870 aa22.38■■□□□ 1.17
ERCC2-201ENST00000391941 NEXMIFQ5QGS0 1516 aa22.37■■□□□ 1.17
ERCC2-201ENST00000391941 CAVIN1Q6NZI2 390 aaKnown RBP22.37■■□□□ 1.17
ERCC2-201ENST00000391941 RBM27Q9P2N5 1060 aaKnown RBP22.37■■□□□ 1.17
ERCC2-201ENST00000391941 BAG4O95429 457 aaKnown RBP22.36■■□□□ 1.17
ERCC2-201ENST00000391941 RRS1Q15050 365 aaKnown RBP22.36■■□□□ 1.17
ERCC2-201ENST00000391941 ZGPATQ8N5A5 531 aaKnown RBP22.36■■□□□ 1.17
ERCC2-201ENST00000391941 NASPP49321 788 aaPredicted RBP22.36■■□□□ 1.17
ERCC2-201ENST00000391941 HECW2Q9P2P5 1572 aa22.36■■□□□ 1.17
ERCC2-201ENST00000391941 FBXO31Q5XUX0 539 aaPredicted RBP22.35■■□□□ 1.17
ERCC2-201ENST00000391941 PLEKHG5O94827 1062 aa22.35■■□□□ 1.17
ERCC2-201ENST00000391941 TWISTNBQ3B726 338 aaPredicted RBP22.35■■□□□ 1.17
ERCC2-201ENST00000391941 POGZQ7Z3K3 1410 aa22.34■■□□□ 1.17
ERCC2-201ENST00000391941 TPRNQ4KMQ1 711 aa22.34■■□□□ 1.17
ERCC2-201ENST00000391941 CD163L1Q9NR16 1453 aa22.34■■□□□ 1.17
ERCC2-201ENST00000391941 SIGLEC1Q9BZZ2 1709 aa22.34■■□□□ 1.17
ERCC2-201ENST00000391941 ARID3AQ99856 593 aa22.34■■□□□ 1.17
ERCC2-201ENST00000391941 CIZ1Q9ULV3 898 aaPredicted RBP22.34■■□□□ 1.17
ERCC2-201ENST00000391941 FOXD4L6Q3SYB3 417 aaPredicted RBP22.33■■□□□ 1.17
ERCC2-201ENST00000391941 TSHZ3Q63HK5 1081 aa22.33■■□□□ 1.17
ERCC2-201ENST00000391941 FOXD4L3Q6VB84 417 aaPredicted RBP22.33■■□□□ 1.17
ERCC2-201ENST00000391941 PNPLA6Q8IY17 1366 aa22.33■■□□□ 1.17
ERCC2-201ENST00000391941 FCHSD2O94868 740 aa22.33■■□□□ 1.17
ERCC2-201ENST00000391941 NME9Q86XW9 330 aa22.33■■□□□ 1.17
ERCC2-201ENST00000391941 LRRC7Q96NW7 1537 aa22.33■■□□□ 1.16
ERCC2-201ENST00000391941 PLEKHM2Q8IWE5 1019 aa22.32■■□□□ 1.16
ERCC2-201ENST00000391941 NOL8Q76FK4 1167 aaKnown RBP22.32■■□□□ 1.16
ERCC2-201ENST00000391941 HDGFL2Q7Z4V5 671 aaPredicted RBP22.32■■□□□ 1.16
ERCC2-201ENST00000391941 GCC1Q96CN9 775 aa22.31■■□□□ 1.16
ERCC2-201ENST00000391941 CDC45O75419 566 aa22.31■■□□□ 1.16
ERCC2-201ENST00000391941 MLH3Q9UHC1 1453 aa22.31■■□□□ 1.16
ERCC2-201ENST00000391941 MED14O60244 1454 aa22.3■■□□□ 1.16
ERCC2-201ENST00000391941 NFE2L2Q16236 605 aa22.3■■□□□ 1.16
ERCC2-201ENST00000391941 RBM10P98175 930 aaKnown RBP22.3■■□□□ 1.16
ERCC2-201ENST00000391941 SOX12O15370 315 aa22.29■■□□□ 1.16
ERCC2-201ENST00000391941 ISY1Q9ULR0 285 aaKnown RBP22.29■■□□□ 1.16
ERCC2-201ENST00000391941 CFAP74Q9C0B2 1584 aa22.29■■□□□ 1.16
ERCC2-201ENST00000391941 PRPF40AO75400 957 aaKnown RBP22.28■■□□□ 1.16
ERCC2-201ENST00000391941 BRPF1P55201 1214 aaPredicted RBP22.28■■□□□ 1.16
ERCC2-201ENST00000391941 KIAA1211Q6ZU35 1233 aa22.28■■□□□ 1.16
ERCC2-201ENST00000391941 MPNDQ8N594 471 aa22.28■■□□□ 1.16
ERCC2-201ENST00000391941 NSFL1CQ9UNZ2 370 aaKnown RBP22.28■■□□□ 1.16
ERCC2-201ENST00000391941 PTPRMP28827 1452 aa22.28■■□□□ 1.16
ERCC2-201ENST00000391941 MIS18AQ9NYP9 233 aa22.28■■□□□ 1.16
ERCC2-201ENST00000391941 AEBP1Q8IUX7 1158 aa22.27■■□□□ 1.16
ERCC2-201ENST00000391941 PIK3C2BO00750 1634 aa22.27■■□□□ 1.16
ERCC2-201ENST00000391941 RBSNQ9H1K0 784 aa22.27■■□□□ 1.16
ERCC2-201ENST00000391941 ZNF428Q96B54 188 aa22.26■■□□□ 1.15
ERCC2-201ENST00000391941 FAM135BQ49AJ0 1406 aa22.26■■□□□ 1.15
ERCC2-201ENST00000391941 ZMYND15Q9H091 742 aa22.26■■□□□ 1.15
ERCC2-201ENST00000391941 SKOR2Q2VWA4 1001 aaPredicted RBP22.25■■□□□ 1.15
ERCC2-201ENST00000391941 DTNBO60941 627 aa22.25■■□□□ 1.15
ERCC2-201ENST00000391941 PRIM1P49642 420 aaKnown RBP22.25■■□□□ 1.15
ERCC2-201ENST00000391941 ABCC4O15439 1325 aa22.25■■□□□ 1.15
ERCC2-201ENST00000391941 SDSP20132 328 aa22.24■■□□□ 1.15
ERCC2-201ENST00000391941 ZSCAN23Q3MJ62 389 aa22.24■■□□□ 1.15
ERCC2-201ENST00000391941 ARHGAP45Q92619 1136 aa22.24■■□□□ 1.15
ERCC2-201ENST00000391941 NUTM2FA1L443 756 aa22.24■■□□□ 1.15
ERCC2-201ENST00000391941 GOLGA6L22H0YM25 854 aa22.24■■□□□ 1.15
ERCC2-201ENST00000391941 MCM10Q7L590 875 aa22.24■■□□□ 1.15
ERCC2-201ENST00000391941 RNF214Q8ND24 703 aa22.24■■□□□ 1.15
ERCC2-201ENST00000391941 STAG3Q9UJ98 1225 aa22.24■■□□□ 1.15
ERCC2-201ENST00000391941 YTHDC2Q9H6S0 1430 aaKnown RBP22.23■■□□□ 1.15
ERCC2-201ENST00000391941 XPCQ01831 940 aaPredicted RBP22.23■■□□□ 1.15
ERCC2-201ENST00000391941 TTC22Q5TAA0 569 aa22.23■■□□□ 1.15
ERCC2-201ENST00000391941 USP26Q9BXU7 913 aa22.23■■□□□ 1.15
ERCC2-201ENST00000391941 PIK3R4Q99570 1358 aa22.23■■□□□ 1.15
ERCC2-201ENST00000391941 PTCH1Q13635 1447 aa22.23■■□□□ 1.15
ERCC2-201ENST00000391941 NPM1P06748 294 aaKnown RBP eCLIP22.23■■□□□ 1.15
ERCC2-201ENST00000391941 KLHL40Q2TBA0 621 aa22.23■■□□□ 1.15
ERCC2-201ENST00000391941 MEIS3Q99687 375 aa22.23■■□□□ 1.15
ERCC2-201ENST00000391941 ZFYVE9O95405 1425 aa22.22■■□□□ 1.15
ERCC2-201ENST00000391941 GPT2Q8TD30 523 aa22.22■■□□□ 1.15
ERCC2-201ENST00000391941 CHMP4BQ9H444 224 aaKnown RBP22.22■■□□□ 1.15
ERCC2-201ENST00000391941 LMBRD1Q9NUN5 540 aa22.22■■□□□ 1.15
ERCC2-201ENST00000391941 ANKRD26Q9UPS8 1709 aa22.22■■□□□ 1.15
ERCC2-201ENST00000391941 GNAI1P63096 354 aa22.22■■□□□ 1.15
ERCC2-201ENST00000391941 ZDHHC9Q9Y397 364 aa22.21■■□□□ 1.15
ERCC2-201ENST00000391941 IL13P35225 146 aa22.21■■□□□ 1.15
ERCC2-201ENST00000391941 CALD1Q05682 793 aaKnown RBP22.21■■□□□ 1.15
ERCC2-201ENST00000391941 SLC52A1Q9NWF4 448 aa22.21■■□□□ 1.15
ERCC2-201ENST00000391941 IFT57Q9NWB7 429 aa22.2■■□□□ 1.14
ERCC2-201ENST00000391941 F6X3S4 739 aa22.2■■□□□ 1.14
ERCC2-201ENST00000391941 SLC4A10Q6U841 1118 aa22.2■■□□□ 1.14
ERCC2-201ENST00000391941 CCDC173Q0VFZ6 552 aa22.19■■□□□ 1.14
ERCC2-201ENST00000391941 R3HCC1Q9Y3T6 440 aaKnown RBP22.19■■□□□ 1.14
ERCC2-201ENST00000391941 SYCE3A1L190 88 aa22.19■■□□□ 1.14
ERCC2-201ENST00000391941 DCTPP1Q9H773 170 aa22.18■■□□□ 1.14
ERCC2-201ENST00000391941 ZNF853P0CG23 659 aa22.18■■□□□ 1.14
ERCC2-201ENST00000391941 PTMSP20962 102 aa22.18■■□□□ 1.14
ERCC2-201ENST00000391941 RRP9O43818 475 aaKnown RBP22.17■■□□□ 1.14
ERCC2-201ENST00000391941 ZSCAN30Q86W11 494 aa22.17■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms