RNA–Protein interactions for RNA: ENST00000379446.9

NEDD9-202, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NEDD9, Length 4,536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-202ENST00000379446 TCOF1Q13428 1488 aaKnown RBP8.12□□□□□ -1.11
NEDD9-202ENST00000379446 KIF21AQ7Z4S6 1674 aa8.11□□□□□ -1.11
NEDD9-202ENST00000379446 EIF4G3O43432 1585 aaKnown RBP8.11□□□□□ -1.11
NEDD9-202ENST00000379446 GNL2Q13823 731 aaKnown RBP8.11□□□□□ -1.11
NEDD9-202ENST00000379446 VTI1AQ96AJ9 217 aa8.11□□□□□ -1.11
NEDD9-202ENST00000379446 SMC4Q9NTJ3 1288 aa8.11□□□□□ -1.11
NEDD9-202ENST00000379446 KDM4FA0A1W2PPD8 638 aa8.11□□□□□ -1.11
NEDD9-202ENST00000379446 SPDYE4A6NLX3 237 aa8.11□□□□□ -1.11
NEDD9-202ENST00000379446 GPATCH3Q96I76 525 aa8.11□□□□□ -1.11
NEDD9-202ENST00000379446 CRBNQ96SW2 442 aa8.11□□□□□ -1.11
NEDD9-202ENST00000379446 SAMD9Q5K651 1589 aa8.11□□□□□ -1.11
NEDD9-202ENST00000379446 TRAPPC8Q9Y2L5 1435 aa8.11□□□□□ -1.11
NEDD9-202ENST00000379446 EIF6P56537 245 aaKnown RBP8.11□□□□□ -1.11
NEDD9-202ENST00000379446 CDCA7Q9BWT1 371 aaPredicted RBP8.11□□□□□ -1.11
NEDD9-202ENST00000379446 ACEP12821 1306 aa8.1□□□□□ -1.11
NEDD9-202ENST00000379446 RIPK4P57078 832 aa8.1□□□□□ -1.11
NEDD9-202ENST00000379446 NOL8Q76FK4 1167 aaKnown RBP8.1□□□□□ -1.11
NEDD9-202ENST00000379446 PLCH2O75038 1416 aa8.1□□□□□ -1.11
NEDD9-202ENST00000379446 CCDC141Q6ZP82 1450 aa8.1□□□□□ -1.11
NEDD9-202ENST00000379446 MYO1BO43795 1136 aa8.1□□□□□ -1.11
NEDD9-202ENST00000379446 PDE4AP27815 886 aa8.1□□□□□ -1.11
NEDD9-202ENST00000379446 RIMS2Q9UQ26 1411 aa8.1□□□□□ -1.11
NEDD9-202ENST00000379446 DDX46Q7L014 1031 aaKnown RBP8.1□□□□□ -1.11
NEDD9-202ENST00000379446 IFNL2Q8IZJ0 200 aa8.1□□□□□ -1.11
NEDD9-202ENST00000379446 A0A0U1RQG5 324 aaPredicted RBP8.1□□□□□ -1.11
NEDD9-202ENST00000379446 NME9Q86XW9 330 aa8.1□□□□□ -1.11
NEDD9-202ENST00000379446 NUP153P49790 1475 aaKnown RBP8.09□□□□□ -1.11
NEDD9-202ENST00000379446 BTBD11A6QL63 1104 aa8.09□□□□□ -1.11
NEDD9-202ENST00000379446 IGHMBP2P38935 993 aaKnown RBP8.09□□□□□ -1.11
NEDD9-202ENST00000379446 GSE1Q14687 1217 aa8.09□□□□□ -1.11
NEDD9-202ENST00000379446 ITPRIPQ8IWB1 547 aa8.09□□□□□ -1.11
NEDD9-202ENST00000379446 ATP10BO94823 1461 aa8.09□□□□□ -1.11
NEDD9-202ENST00000379446 KIAA1211Q6ZU35 1233 aa8.09□□□□□ -1.11
NEDD9-202ENST00000379446 GNL3LQ9NVN8 582 aaKnown RBP8.09□□□□□ -1.11
NEDD9-202ENST00000379446 ABCA5Q8WWZ7 1642 aa8.09□□□□□ -1.11
NEDD9-202ENST00000379446 DEFB132Q7Z7B7 95 aa8.09□□□□□ -1.11
NEDD9-202ENST00000379446 CLUAP1Q96AJ1 413 aa8.09□□□□□ -1.11
NEDD9-202ENST00000379446 MYCP01106 439 aaPredicted RBP8.08□□□□□ -1.12
NEDD9-202ENST00000379446 YEATS2Q9ULM3 1422 aa8.08□□□□□ -1.12
NEDD9-202ENST00000379446 A0A087WZG4 1122 aa8.08□□□□□ -1.12
NEDD9-202ENST00000379446 H0YIN7 160 aa8.08□□□□□ -1.12
NEDD9-202ENST00000379446 GCP02774 474 aa8.08□□□□□ -1.12
NEDD9-202ENST00000379446 LTKP29376 864 aa8.08□□□□□ -1.12
NEDD9-202ENST00000379446 GZF1Q9H116 711 aaPredicted RBP8.08□□□□□ -1.12
NEDD9-202ENST00000379446 TRMT112Q9UI30 125 aaKnown RBP8.08□□□□□ -1.12
NEDD9-202ENST00000379446 SPRYD3Q8NCJ5 442 aa8.08□□□□□ -1.12
NEDD9-202ENST00000379446 PRM3Q9NNZ6 103 aa8.08□□□□□ -1.12
NEDD9-202ENST00000379446 BRD4O60885 1362 aaPredicted RBP8.08□□□□□ -1.12
NEDD9-202ENST00000379446 PRIM1P49642 420 aaKnown RBP8.08□□□□□ -1.12
NEDD9-202ENST00000379446 UNC5CLQ8IV45 518 aa8.07□□□□□ -1.12
NEDD9-202ENST00000379446 ABCC10Q5T3U5 1492 aa8.07□□□□□ -1.12
NEDD9-202ENST00000379446 NPHP4O75161 1426 aaPredicted RBP8.07□□□□□ -1.12
NEDD9-202ENST00000379446 PRKG1Q13976 671 aa8.07□□□□□ -1.12
NEDD9-202ENST00000379446 LARGE2Q8N3Y3 721 aa8.07□□□□□ -1.12
NEDD9-202ENST00000379446 HMMRO75330 724 aa8.07□□□□□ -1.12
NEDD9-202ENST00000379446 G3BP1Q13283 466 aaKnown RBP eCLIP8.07□□□□□ -1.121e-7■■□□□ 12.7
NEDD9-202ENST00000379446 ZRSR1Q15695 479 aaKnown RBP8.07□□□□□ -1.12
NEDD9-202ENST00000379446 WWC1Q8IX03 1113 aa8.07□□□□□ -1.12
NEDD9-202ENST00000379446 GPATCH8Q9UKJ3 1502 aaKnown RBP8.07□□□□□ -1.12
NEDD9-202ENST00000379446 TRIM6-TRIM34B2RNG4 842 aa8.06□□□□□ -1.12
NEDD9-202ENST00000379446 HDGFL1Q5TGJ6 251 aa8.06□□□□□ -1.12
NEDD9-202ENST00000379446 CCDC43Q96MW1 224 aaKnown RBP8.06□□□□□ -1.12
NEDD9-202ENST00000379446 WDR70Q9NW82 654 aa8.06□□□□□ -1.12
NEDD9-202ENST00000379446 KDM5BQ9UGL1 1544 aa8.06□□□□□ -1.12
NEDD9-202ENST00000379446 PZPP20742 1482 aa8.06□□□□□ -1.12
NEDD9-202ENST00000379446 PRKAR2BP31323 418 aa8.06□□□□□ -1.12
NEDD9-202ENST00000379446 FLAD1Q8NFF5 587 aa8.06□□□□□ -1.12
NEDD9-202ENST00000379446 ZBTB3Q9H5J0 574 aa8.06□□□□□ -1.12
NEDD9-202ENST00000379446 JCADQ9P266 1359 aa8.06□□□□□ -1.12
NEDD9-202ENST00000379446 CEP170Q5SW79 1584 aa8.06□□□□□ -1.12
NEDD9-202ENST00000379446 VEZTQ9HBM0 779 aa8.06□□□□□ -1.12
NEDD9-202ENST00000379446 ADAMTS8Q9UP79 889 aa8.06□□□□□ -1.12
NEDD9-202ENST00000379446 NUTM1Q86Y26 1132 aa8.06□□□□□ -1.12
NEDD9-202ENST00000379446 RASSF8Q8NHQ8 419 aa8.06□□□□□ -1.12
NEDD9-202ENST00000379446 SLKQ9H2G2 1235 aaPredicted RBP8.06□□□□□ -1.12
NEDD9-202ENST00000379446 ADGRF5Q8IZF2 1346 aa8.05□□□□□ -1.12
NEDD9-202ENST00000379446 CCDC57Q2TAC2 916 aa8.05□□□□□ -1.12
NEDD9-202ENST00000379446 CRACR2BQ8N4Y2 399 aaPredicted RBP8.05□□□□□ -1.12
NEDD9-202ENST00000379446 AMOTQ4VCS5 1084 aa8.05□□□□□ -1.12
NEDD9-202ENST00000379446 TPTE2Q6XPS3 522 aa8.05□□□□□ -1.12
NEDD9-202ENST00000379446 ZC3H12CQ9C0D7 883 aaKnown RBP8.05□□□□□ -1.12
NEDD9-202ENST00000379446 ATAD2Q6PL18 1390 aa8.04□□□□□ -1.12
NEDD9-202ENST00000379446 TCIRG1Q13488 830 aa8.04□□□□□ -1.12
NEDD9-202ENST00000379446 TBC1D2BQ9UPU7 963 aa8.04□□□□□ -1.12
NEDD9-202ENST00000379446 KIF14Q15058 1648 aa8.04□□□□□ -1.12
NEDD9-202ENST00000379446 HSP90AA2PQ14568 343 aaPredicted RBP8.04□□□□□ -1.12
NEDD9-202ENST00000379446 FEZ1Q99689 392 aa8.04□□□□□ -1.12
NEDD9-202ENST00000379446 ADAMTS12P58397 1594 aa8.04□□□□□ -1.12
NEDD9-202ENST00000379446 SPATA31E1Q6ZUB1 1445 aa8.04□□□□□ -1.12
NEDD9-202ENST00000379446 SIRT1Q96EB6 747 aa8.04□□□□□ -1.12
NEDD9-202ENST00000379446 NLRP3Q96P20 1036 aa8.04□□□□□ -1.12
NEDD9-202ENST00000379446 ABCF2Q9UG63 623 aa8.04□□□□□ -1.12
NEDD9-202ENST00000379446 NSFL1CQ9UNZ2 370 aaKnown RBP8.04□□□□□ -1.12
NEDD9-202ENST00000379446 F8W031 263 aaPredicted RBP8.04□□□□□ -1.12
NEDD9-202ENST00000379446 NFKBIBQ15653 356 aa8.04□□□□□ -1.12
NEDD9-202ENST00000379446 TEX13AQ9BXU3 409 aaPredicted RBP8.04□□□□□ -1.12
NEDD9-202ENST00000379446 SPINK5Q9NQ38 1064 aaPredicted RBP8.04□□□□□ -1.12
NEDD9-202ENST00000379446 GCC2Q8IWJ2 1684 aa8.03□□□□□ -1.12
NEDD9-202ENST00000379446 GRIN3BO60391 1043 aa8.03□□□□□ -1.12
NEDD9-202ENST00000379446 EP400NLQ6ZTU2 488 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 96.9 ms