RNA–Protein interactions for RNA: ENST00000373839.7

PHACTR4-202, Transcript of phosphatase and actin regulator 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHACTR4, Length 6,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-202ENST00000373839 DACH1Q9UI36 760 aa13.21□□□□□ -0.3
PHACTR4-202ENST00000373839 RSPH6AQ9H0K4 717 aa13.2□□□□□ -0.3
PHACTR4-202ENST00000373839 NOL7Q9UMY1 257 aaKnown RBP13.2□□□□□ -0.3
PHACTR4-202ENST00000373839 CYP46A1Q9Y6A2 500 aa13.2□□□□□ -0.3
PHACTR4-202ENST00000373839 KIAA0586Q9BVV6 1533 aa13.2□□□□□ -0.3
PHACTR4-202ENST00000373839 STK38Q15208 465 aa13.2□□□□□ -0.3
PHACTR4-202ENST00000373839 SLC12A5Q9H2X9 1139 aa13.2□□□□□ -0.3
PHACTR4-202ENST00000373839 STIM1Q13586 685 aa13.2□□□□□ -0.3
PHACTR4-202ENST00000373839 ZFYVE27Q5T4F4 411 aa13.2□□□□□ -0.3
PHACTR4-202ENST00000373839 ERCC4Q92889 916 aaPredicted RBP13.2□□□□□ -0.3
PHACTR4-202ENST00000373839 ARID3AQ99856 593 aa13.2□□□□□ -0.3
PHACTR4-202ENST00000373839 IGHMBP2P38935 993 aaKnown RBP13.2□□□□□ -0.3
PHACTR4-202ENST00000373839 RRP12Q5JTH9 1297 aaKnown RBP13.2□□□□□ -0.3
PHACTR4-202ENST00000373839 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.2□□□□□ -0.3
PHACTR4-202ENST00000373839 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.19□□□□□ -0.3
PHACTR4-202ENST00000373839 ZNF287Q9HBT7 754 aa13.19□□□□□ -0.3
PHACTR4-202ENST00000373839 MTMR7Q9Y216 660 aa13.19□□□□□ -0.3
PHACTR4-202ENST00000373839 SLC4A3P48751 1232 aa13.19□□□□□ -0.3
PHACTR4-202ENST00000373839 KRT32Q14532 448 aa13.19□□□□□ -0.3
PHACTR4-202ENST00000373839 HSP90AB2PQ58FF8 381 aa13.19□□□□□ -0.3
PHACTR4-202ENST00000373839 FOSBP53539 338 aa13.19□□□□□ -0.3
PHACTR4-202ENST00000373839 CCDC141Q6ZP82 1450 aa13.19□□□□□ -0.3
PHACTR4-202ENST00000373839 PPP6R1Q9UPN7 881 aa13.19□□□□□ -0.3
PHACTR4-202ENST00000373839 WDHD1O75717 1129 aaPredicted RBP13.19□□□□□ -0.3
PHACTR4-202ENST00000373839 NEK4P51957 841 aa13.19□□□□□ -0.3
PHACTR4-202ENST00000373839 HSP90B2PQ58FF3 399 aa13.19□□□□□ -0.3
PHACTR4-202ENST00000373839 CCDC69A6NI79 296 aa13.18□□□□□ -0.3
PHACTR4-202ENST00000373839 SLC26A8Q96RN1 970 aa13.18□□□□□ -0.3
PHACTR4-202ENST00000373839 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.18□□□□□ -0.3
PHACTR4-202ENST00000373839 IFT57Q9NWB7 429 aa13.18□□□□□ -0.3
PHACTR4-202ENST00000373839 PPP1R1BQ9UD71 204 aaPredicted RBP13.18□□□□□ -0.3
PHACTR4-202ENST00000373839 RPAP2Q8IXW5 612 aaPredicted RBP13.18□□□□□ -0.3
PHACTR4-202ENST00000373839 BTBD11A6QL63 1104 aa13.17□□□□□ -0.3
PHACTR4-202ENST00000373839 AMOTQ4VCS5 1084 aa13.17□□□□□ -0.3
PHACTR4-202ENST00000373839 DMRT2Q9Y5R5 561 aa13.17□□□□□ -0.3
PHACTR4-202ENST00000373839 EPRSP07814 1512 aaKnown RBP13.17□□□□□ -0.3
PHACTR4-202ENST00000373839 RAPGEF3O95398 923 aa13.17□□□□□ -0.3
PHACTR4-202ENST00000373839 WASF1Q92558 559 aa13.17□□□□□ -0.3
PHACTR4-202ENST00000373839 CCDC39Q9UFE4 941 aa13.17□□□□□ -0.3
PHACTR4-202ENST00000373839 POLA1P09884 1462 aaPredicted RBP13.17□□□□□ -0.3
PHACTR4-202ENST00000373839 ZNHIT6Q9NWK9 470 aaKnown RBP13.17□□□□□ -0.3
PHACTR4-202ENST00000373839 ATF7IPQ6VMQ6 1270 aa13.17□□□□□ -0.3
PHACTR4-202ENST00000373839 BMP2KQ9NSY1 1161 aaPredicted RBP13.17□□□□□ -0.3
PHACTR4-202ENST00000373839 NOB1Q9ULX3 412 aaKnown RBP13.16□□□□□ -0.3
PHACTR4-202ENST00000373839 ZSCAN31Q96LW9 406 aaPredicted RBP13.16□□□□□ -0.3
PHACTR4-202ENST00000373839 LRPPRCP42704 1394 aaKnown RBP13.16□□□□□ -0.3
PHACTR4-202ENST00000373839 NBPF1Q3BBV0 1214 aa13.16□□□□□ -0.3
PHACTR4-202ENST00000373839 ATP2B2Q01814 1243 aa13.16□□□□□ -0.3
PHACTR4-202ENST00000373839 HSP90AB3PQ58FF7 597 aa13.16□□□□□ -0.3
PHACTR4-202ENST00000373839 PAF1Q8N7H5 531 aa13.16□□□□□ -0.3
PHACTR4-202ENST00000373839 FAM13BQ9NYF5 915 aa13.16□□□□□ -0.3
PHACTR4-202ENST00000373839 ARAP1Q96P48 1450 aa13.16□□□□□ -0.3
PHACTR4-202ENST00000373839 NUDT16Q96DE0 195 aaKnown RBP13.15□□□□□ -0.3
PHACTR4-202ENST00000373839 AKAP2Q9Y2D5 859 aa13.15□□□□□ -0.3
PHACTR4-202ENST00000373839 GNAT3A8MTJ3 354 aa13.15□□□□□ -0.3
PHACTR4-202ENST00000373839 RBM5P52756 815 aaKnown RBP eCLIP13.15□□□□□ -0.36e-12■■■□□ 16.5
PHACTR4-202ENST00000373839 UBAC1Q9BSL1 405 aa13.15□□□□□ -0.3
PHACTR4-202ENST00000373839 PDZRN3Q9UPQ7 1066 aa13.15□□□□□ -0.3
PHACTR4-202ENST00000373839 DNMBPQ6XZF7 1577 aa13.15□□□□□ -0.3
PHACTR4-202ENST00000373839 ATP2B1P20020 1258 aa13.15□□□□□ -0.3
PHACTR4-202ENST00000373839 DCTN1Q14203 1278 aa13.15□□□□□ -0.3
PHACTR4-202ENST00000373839 PDILTQ8N807 584 aa13.15□□□□□ -0.3
PHACTR4-202ENST00000373839 MRE11P49959 708 aa13.15□□□□□ -0.3
PHACTR4-202ENST00000373839 NFE2L2Q16236 605 aa13.15□□□□□ -0.3
PHACTR4-202ENST00000373839 CAGE1Q8TC20 777 aa13.15□□□□□ -0.3
PHACTR4-202ENST00000373839 PRXQ9BXM0 1461 aa13.15□□□□□ -0.3
PHACTR4-202ENST00000373839 WDR33Q9C0J8 1336 aaKnown RBP13.14□□□□□ -0.31
PHACTR4-202ENST00000373839 DESP17661 470 aa13.14□□□□□ -0.31
PHACTR4-202ENST00000373839 CD109Q6YHK3 1445 aa13.14□□□□□ -0.31
PHACTR4-202ENST00000373839 HSP90AA2PQ14568 343 aaPredicted RBP13.13□□□□□ -0.31
PHACTR4-202ENST00000373839 ABCC11Q96J66 1382 aa13.13□□□□□ -0.31
PHACTR4-202ENST00000373839 TDO2P48775 406 aa13.13□□□□□ -0.31
PHACTR4-202ENST00000373839 SRGAP3O43295 1099 aa13.13□□□□□ -0.31
PHACTR4-202ENST00000373839 DNAI2Q9GZS0 605 aa13.13□□□□□ -0.31
PHACTR4-202ENST00000373839 PDCL3Q9H2J4 239 aa13.13□□□□□ -0.31
PHACTR4-202ENST00000373839 RAI14Q9P0K7 980 aa13.13□□□□□ -0.31
PHACTR4-202ENST00000373839 MYL6BP14649 208 aa13.13□□□□□ -0.31
PHACTR4-202ENST00000373839 BLOC1S2Q6QNY1 142 aa13.13□□□□□ -0.31
PHACTR4-202ENST00000373839 ZSCAN29Q8IWY8 852 aaPredicted RBP13.13□□□□□ -0.31
PHACTR4-202ENST00000373839 TMOD3Q9NYL9 352 aa13.13□□□□□ -0.31
PHACTR4-202ENST00000373839 MVPQ14764 893 aaKnown RBP13.13□□□□□ -0.31
PHACTR4-202ENST00000373839 LARP1Q6PKG0 1096 aaKnown RBP13.13□□□□□ -0.31
PHACTR4-202ENST00000373839 AACSQ86V21 672 aa13.13□□□□□ -0.31
PHACTR4-202ENST00000373839 TRIM21P19474 475 aaKnown RBP13.12□□□□□ -0.31
PHACTR4-202ENST00000373839 TRIM5Q9C035 493 aa13.12□□□□□ -0.31
PHACTR4-202ENST00000373839 KRT85P78386 507 aa13.12□□□□□ -0.31
PHACTR4-202ENST00000373839 MPHOSPH10O00566 681 aaKnown RBP13.12□□□□□ -0.31
PHACTR4-202ENST00000373839 IFIT1P09914 478 aaKnown RBP13.12□□□□□ -0.31
PHACTR4-202ENST00000373839 LRP2BPQ9P2M1 347 aa13.12□□□□□ -0.31
PHACTR4-202ENST00000373839 ZPR1O75312 459 aa13.11□□□□□ -0.31
PHACTR4-202ENST00000373839 PIP4K2BP78356 416 aa13.11□□□□□ -0.31
PHACTR4-202ENST00000373839 TSR2Q969E8 191 aaKnown RBP13.11□□□□□ -0.31
PHACTR4-202ENST00000373839 NESP48681 1621 aa13.11□□□□□ -0.31
PHACTR4-202ENST00000373839 TOP2BQ02880 1626 aa13.11□□□□□ -0.31
PHACTR4-202ENST00000373839 ERLIN2O94905 339 aa13.11□□□□□ -0.31
PHACTR4-202ENST00000373839 SIL1Q9H173 461 aa13.11□□□□□ -0.31
PHACTR4-202ENST00000373839 SUPT6HQ7KZ85 1726 aaKnown RBP13.11□□□□□ -0.31
PHACTR4-202ENST00000373839 CAVIN4Q5BKX8 364 aa13.11□□□□□ -0.31
PHACTR4-202ENST00000373839 SLF2Q8IX21 1173 aa13.11□□□□□ -0.31
PHACTR4-202ENST00000373839 RAB11FIP3O75154 756 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 137.4 ms