RNA–Protein interactions for RNA: ENST00000361339.9

IFT140-201, Transcript of intraflagellar transport 140, humanhuman

TSL 1 (best) BASIC

Gene IFT140, Length 2,987 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-201ENST00000361339 FAM135BQ49AJ0 1406 aa20.43■□□□□ 0.86
IFT140-201ENST00000361339 C1orf115Q9H7X2 142 aa20.43■□□□□ 0.86
IFT140-201ENST00000361339 AEBP1Q8IUX7 1158 aa20.42■□□□□ 0.86
IFT140-201ENST00000361339 CPSF1Q10570 1443 aaKnown RBP20.42■□□□□ 0.86
IFT140-201ENST00000361339 ROBO2Q9HCK4 1378 aa20.41■□□□□ 0.86
IFT140-201ENST00000361339 SLC26A8Q96RN1 970 aa20.41■□□□□ 0.86
IFT140-201ENST00000361339 ATP7BP35670 1465 aa20.41■□□□□ 0.86
IFT140-201ENST00000361339 LTKP29376 864 aa20.4■□□□□ 0.86
IFT140-201ENST00000361339 NFE2L2Q16236 605 aa20.4■□□□□ 0.86
IFT140-201ENST00000361339 NCBP3Q53F19 620 aaKnown RBP20.4■□□□□ 0.86
IFT140-201ENST00000361339 DLC1Q96QB1 1528 aa20.4■□□□□ 0.86
IFT140-201ENST00000361339 PPP6R1Q9UPN7 881 aa20.4■□□□□ 0.86
IFT140-201ENST00000361339 CCDC61Q9Y6R9 512 aa20.4■□□□□ 0.86
IFT140-201ENST00000361339 IL16Q14005 1332 aa20.39■□□□□ 0.86
IFT140-201ENST00000361339 REREQ9P2R6 1566 aa20.39■□□□□ 0.85
IFT140-201ENST00000361339 COG3Q96JB2 828 aa20.39■□□□□ 0.85
IFT140-201ENST00000361339 MBIPQ9NS73 344 aa20.39■□□□□ 0.85
IFT140-201ENST00000361339 KRT24Q2M2I5 525 aa20.38■□□□□ 0.85
IFT140-201ENST00000361339 ZBTB40Q9NUA8 1239 aa20.38■□□□□ 0.85
IFT140-201ENST00000361339 EDC4Q6P2E9 1401 aaKnown RBP20.38■□□□□ 0.85
IFT140-201ENST00000361339 CT47B1P0C2W7 299 aaPredicted RBP20.37■□□□□ 0.85
IFT140-201ENST00000361339 DDX19BQ9UMR2 479 aa20.37■□□□□ 0.85
IFT140-201ENST00000361339 VAMP4O75379 141 aa20.37■□□□□ 0.85
IFT140-201ENST00000361339 C8orf58Q8NAV2 365 aa20.37■□□□□ 0.85
IFT140-201ENST00000361339 TNRQ92752 1358 aa20.36■□□□□ 0.85
IFT140-201ENST00000361339 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.35■□□□□ 0.85
IFT140-201ENST00000361339 TBC1D2Q9BYX2 928 aa20.35■□□□□ 0.85
IFT140-201ENST00000361339 LNPKQ9C0E8 428 aa20.35■□□□□ 0.85
IFT140-201ENST00000361339 VIRMAQ69YN4 1812 aaKnown RBP20.35■□□□□ 0.85
IFT140-201ENST00000361339 MFAP1P55081 439 aaKnown RBP20.34■□□□□ 0.85
IFT140-201ENST00000361339 UPF2Q9HAU5 1272 aaKnown RBP20.33■□□□□ 0.85
IFT140-201ENST00000361339 MRPL50Q8N5N7 158 aaKnown RBP20.33■□□□□ 0.84
IFT140-201ENST00000361339 TMEM2Q9UHN6 1383 aa20.33■□□□□ 0.84
IFT140-201ENST00000361339 KIF13AQ9H1H9 1805 aa20.32■□□□□ 0.84
IFT140-201ENST00000361339 CDC42BPGQ6DT37 1551 aa20.32■□□□□ 0.84
IFT140-201ENST00000361339 ACEP12821 1306 aa20.32■□□□□ 0.84
IFT140-201ENST00000361339 KIF16BQ96L93 1317 aa20.32■□□□□ 0.84
IFT140-201ENST00000361339 HDAC1Q13547 482 aaPredicted RBP20.32■□□□□ 0.84
IFT140-201ENST00000361339 AAMPQ13685 434 aa20.32■□□□□ 0.84
IFT140-201ENST00000361339 HSP90AB2PQ58FF8 381 aa20.32■□□□□ 0.84
IFT140-201ENST00000361339 SULT6B1Q6IMI4 303 aa20.32■□□□□ 0.84
IFT140-201ENST00000361339 EIF4A2Q14240 407 aaKnown RBP20.31■□□□□ 0.84
IFT140-201ENST00000361339 TBC1D32Q96NH3 1257 aa20.31■□□□□ 0.84
IFT140-201ENST00000361339 ADAMTS13Q76LX8 1427 aa20.31■□□□□ 0.84
IFT140-201ENST00000361339 MCM10Q7L590 875 aa20.3■□□□□ 0.84
IFT140-201ENST00000361339 TWISTNBQ3B726 338 aaPredicted RBP20.3■□□□□ 0.84
IFT140-201ENST00000361339 SMC5Q8IY18 1101 aa20.3■□□□□ 0.84
IFT140-201ENST00000361339 ANTXR1Q9H6X2 564 aa20.3■□□□□ 0.84
IFT140-201ENST00000361339 IPO8O15397 1037 aaKnown RBP20.29■□□□□ 0.84
IFT140-201ENST00000361339 ZNF853P0CG23 659 aa20.29■□□□□ 0.84
IFT140-201ENST00000361339 MCM4P33991 863 aa20.29■□□□□ 0.84
IFT140-201ENST00000361339 ALDH1L2Q3SY69 923 aa20.29■□□□□ 0.84
IFT140-201ENST00000361339 CDK12Q9NYV4 1490 aaPredicted RBP20.29■□□□□ 0.84
IFT140-201ENST00000361339 TTC21BQ7Z4L5 1316 aa20.29■□□□□ 0.84
IFT140-201ENST00000361339 TRAK2O60296 914 aa20.28■□□□□ 0.84
IFT140-201ENST00000361339 ZBTB7BO15156 539 aaPredicted RBP20.28■□□□□ 0.84
IFT140-201ENST00000361339 CLCN1P35523 988 aa20.28■□□□□ 0.84
IFT140-201ENST00000361339 MIS18AQ9NYP9 233 aa20.28■□□□□ 0.84
IFT140-201ENST00000361339 SIRT2Q8IXJ6 389 aa20.27■□□□□ 0.84
IFT140-201ENST00000361339 PTPRUQ92729 1446 aa20.27■□□□□ 0.84
IFT140-201ENST00000361339 GNAI1P63096 354 aa20.27■□□□□ 0.83
IFT140-201ENST00000361339 IFT57Q9NWB7 429 aa20.27■□□□□ 0.83
IFT140-201ENST00000361339 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.27■□□□□ 0.83
IFT140-201ENST00000361339 FOXO3O43524 673 aa20.26■□□□□ 0.83
IFT140-201ENST00000361339 AATKQ6ZMQ8 1374 aa20.26■□□□□ 0.83
IFT140-201ENST00000361339 DLG5Q8TDM6 1919 aa20.25■□□□□ 0.83
IFT140-201ENST00000361339 TECPR2O15040 1411 aa20.25■□□□□ 0.83
IFT140-201ENST00000361339 CFAP44Q96MT7 982 aa20.25■□□□□ 0.83
IFT140-201ENST00000361339 ANKRD45Q5TZF3 282 aa20.24■□□□□ 0.83
IFT140-201ENST00000361339 ARID3AQ99856 593 aa20.24■□□□□ 0.83
IFT140-201ENST00000361339 UBR1Q8IWV7 1749 aa20.24■□□□□ 0.83
IFT140-201ENST00000361339 NUTM2GQ5VZR2 741 aa20.24■□□□□ 0.83
IFT140-201ENST00000361339 ERBB4Q15303 1308 aa20.24■□□□□ 0.83
IFT140-201ENST00000361339 MON2Q7Z3U7 1717 aa20.24■□□□□ 0.83
IFT140-201ENST00000361339 NUCB1Q02818 461 aa20.23■□□□□ 0.83
IFT140-201ENST00000361339 TRIM44Q96DX7 344 aaPredicted RBP20.23■□□□□ 0.83
IFT140-201ENST00000361339 C3P01024 1663 aa20.23■□□□□ 0.83
IFT140-201ENST00000361339 RRP9O43818 475 aaKnown RBP20.22■□□□□ 0.83
IFT140-201ENST00000361339 FOXD4L1Q9NU39 408 aa20.22■□□□□ 0.83
IFT140-201ENST00000361339 HDGFP51858 240 aaKnown RBP20.22■□□□□ 0.83
IFT140-201ENST00000361339 C22orf23Q9BZE7 217 aa20.22■□□□□ 0.83
IFT140-201ENST00000361339 AMOTL2Q9Y2J4 779 aa20.22■□□□□ 0.83
IFT140-201ENST00000361339 CHD1LQ86WJ1 897 aa20.22■□□□□ 0.83
IFT140-201ENST00000361339 ZNF692Q9BU19 519 aaPredicted RBP20.22■□□□□ 0.83
IFT140-201ENST00000361339 ESPNB1AK53 854 aa20.21■□□□□ 0.83
IFT140-201ENST00000361339 RBM33Q96EV2 1170 aaKnown RBP20.21■□□□□ 0.83
IFT140-201ENST00000361339 FSD2A1L4K1 749 aa20.2■□□□□ 0.82
IFT140-201ENST00000361339 GRPEL1Q9HAV7 217 aa20.2■□□□□ 0.82
IFT140-201ENST00000361339 AKAP12Q02952 1782 aa20.19■□□□□ 0.82
IFT140-201ENST00000361339 SIRT1Q96EB6 747 aa20.19■□□□□ 0.82
IFT140-201ENST00000361339 ABCC4O15439 1325 aa20.19■□□□□ 0.82
IFT140-201ENST00000361339 ITSN1Q15811 1721 aa20.18■□□□□ 0.82
IFT140-201ENST00000361339 PEAK1Q9H792 1746 aa20.18■□□□□ 0.82
IFT140-201ENST00000361339 USP6P35125 1406 aa20.18■□□□□ 0.82
IFT140-201ENST00000361339 PTCH1Q13635 1447 aa20.18■□□□□ 0.82
IFT140-201ENST00000361339 KNDC1Q76NI1 1749 aa20.18■□□□□ 0.82
IFT140-201ENST00000361339 MAP3K19Q56UN5 1328 aa20.17■□□□□ 0.82
IFT140-201ENST00000361339 BRPF1P55201 1214 aaPredicted RBP20.17■□□□□ 0.82
IFT140-201ENST00000361339 CALD1Q05682 793 aaKnown RBP20.17■□□□□ 0.82
IFT140-201ENST00000361339 OVOS2A0A0J9YW53 1432 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 118.2 ms