RNA–Protein interactions for RNA: ENST00000359353.9

DDX42-201, Transcript of DEAD-box helicase 42, humanhuman

TSL 5 BASIC

Gene DDX42, Length 2,783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-201ENST00000359353 C8orf58Q8NAV2 365 aa30.02■■■□□ 2.4
DDX42-201ENST00000359353 GAS2L2Q8NHY3 880 aa30.02■■■□□ 2.4
DDX42-201ENST00000359353 ERBB4Q15303 1308 aa30.01■■■□□ 2.39
DDX42-201ENST00000359353 RAB3GAP1Q15042 981 aa30■■■□□ 2.39
DDX42-201ENST00000359353 STAG3Q9UJ98 1225 aa30■■■□□ 2.39
DDX42-201ENST00000359353 FAM135BQ49AJ0 1406 aa30■■■□□ 2.39
DDX42-201ENST00000359353 ANKRD26Q9UPS8 1709 aa30■■■□□ 2.39
DDX42-201ENST00000359353 APBB1O00213 710 aa30■■■□□ 2.39
DDX42-201ENST00000359353 CFAP74Q9C0B2 1584 aa30■■■□□ 2.39
DDX42-201ENST00000359353 TWISTNBQ3B726 338 aaPredicted RBP29.98■■■□□ 2.39
DDX42-201ENST00000359353 NME9Q86XW9 330 aa29.98■■■□□ 2.39
DDX42-201ENST00000359353 C16orf71Q8IYS4 520 aaPredicted RBP29.98■■■□□ 2.39
DDX42-201ENST00000359353 GCC1Q96CN9 775 aa29.98■■■□□ 2.39
DDX42-201ENST00000359353 NCKAP5LQ9HCH0 1330 aa29.98■■■□□ 2.39
DDX42-201ENST00000359353 RRS1Q15050 365 aaKnown RBP29.98■■■□□ 2.39
DDX42-201ENST00000359353 MED14O60244 1454 aa29.97■■■□□ 2.39
DDX42-201ENST00000359353 MAP2P11137 1827 aaKnown RBP29.97■■■□□ 2.39
DDX42-201ENST00000359353 K7ELQ4 463 aaPredicted RBP29.97■■■□□ 2.39
DDX42-201ENST00000359353 GBP4Q96PP9 640 aa29.97■■■□□ 2.39
DDX42-201ENST00000359353 SLC52A1Q9NWF4 448 aa29.97■■■□□ 2.39
DDX42-201ENST00000359353 GSPT1P15170 499 aaKnown RBP29.97■■■□□ 2.39
DDX42-201ENST00000359353 KRT24Q2M2I5 525 aa29.96■■■□□ 2.39
DDX42-201ENST00000359353 YEATS2Q9ULM3 1422 aa29.95■■■□□ 2.39
DDX42-201ENST00000359353 CLCN1P35523 988 aa29.94■■■□□ 2.38
DDX42-201ENST00000359353 OTUD7AQ8TE49 926 aaPredicted RBP29.94■■■□□ 2.38
DDX42-201ENST00000359353 KIF20BQ96Q89 1820 aa29.93■■■□□ 2.38
DDX42-201ENST00000359353 GNAI1P63096 354 aa29.92■■■□□ 2.38
DDX42-201ENST00000359353 DIP2CQ9Y2E4 1556 aa29.92■■■□□ 2.38
DDX42-201ENST00000359353 ABCC4O15439 1325 aa29.91■■■□□ 2.38
DDX42-201ENST00000359353 ZFYVE9O95405 1425 aa29.91■■■□□ 2.38
DDX42-201ENST00000359353 CIZ1Q9ULV3 898 aaPredicted RBP29.9■■■□□ 2.38
DDX42-201ENST00000359353 PTCH1Q13635 1447 aa29.89■■■□□ 2.38
DDX42-201ENST00000359353 ARHGEF40Q8TER5 1519 aa29.89■■■□□ 2.38
DDX42-201ENST00000359353 CDC45O75419 566 aa29.89■■■□□ 2.38
DDX42-201ENST00000359353 IL13P35225 146 aa29.89■■■□□ 2.38
DDX42-201ENST00000359353 ESPNB1AK53 854 aa29.89■■■□□ 2.38
DDX42-201ENST00000359353 IFT57Q9NWB7 429 aa29.89■■■□□ 2.38
DDX42-201ENST00000359353 BRPF1P55201 1214 aaPredicted RBP29.88■■■□□ 2.37
DDX42-201ENST00000359353 PLEKHM2Q8IWE5 1019 aa29.88■■■□□ 2.37
DDX42-201ENST00000359353 SMARCA5O60264 1052 aaPredicted RBP29.88■■■□□ 2.37
DDX42-201ENST00000359353 TMEM131LA2VDJ0 1609 aa29.88■■■□□ 2.37
DDX42-201ENST00000359353 CYB5RLQ6IPT4 315 aa29.87■■■□□ 2.37
DDX42-201ENST00000359353 UBE2Q2Q8WVN8 375 aa29.87■■■□□ 2.37
DDX42-201ENST00000359353 ARHGAP45Q92619 1136 aa29.87■■■□□ 2.37
DDX42-201ENST00000359353 TRIM44Q96DX7 344 aaPredicted RBP29.86■■■□□ 2.37
DDX42-201ENST00000359353 PKP1Q13835 747 aa29.86■■■□□ 2.37
DDX42-201ENST00000359353 ZNF853P0CG23 659 aa29.86■■■□□ 2.37
DDX42-201ENST00000359353 ZNF428Q96B54 188 aa29.86■■■□□ 2.37
DDX42-201ENST00000359353 ALKQ9UM73 1620 aa29.85■■■□□ 2.37
DDX42-201ENST00000359353 PIK3R4Q99570 1358 aa29.84■■■□□ 2.37
DDX42-201ENST00000359353 CLTCQ00610 1675 aaKnown RBP29.84■■■□□ 2.37
DDX42-201ENST00000359353 DDX49Q9Y6V7 483 aaKnown RBP29.84■■■□□ 2.37
DDX42-201ENST00000359353 AEBP1Q8IUX7 1158 aa29.83■■■□□ 2.37
DDX42-201ENST00000359353 KNDC1Q76NI1 1749 aa29.83■■■□□ 2.37
DDX42-201ENST00000359353 DLG5Q8TDM6 1919 aa29.83■■■□□ 2.37
DDX42-201ENST00000359353 NCLP19338 710 aaKnown RBP29.83■■■□□ 2.37
DDX42-201ENST00000359353 CFAP44Q96MT7 982 aa29.83■■■□□ 2.37
DDX42-201ENST00000359353 ARHGAP31Q2M1Z3 1444 aa29.83■■■□□ 2.37
DDX42-201ENST00000359353 CHAMP1Q96JM3 812 aa29.82■■■□□ 2.36
DDX42-201ENST00000359353 PREX1Q8TCU6 1659 aa29.82■■■□□ 2.36
DDX42-201ENST00000359353 BAG4O95429 457 aaKnown RBP29.81■■■□□ 2.36
DDX42-201ENST00000359353 CALD1Q05682 793 aaKnown RBP29.81■■■□□ 2.36
DDX42-201ENST00000359353 MCTP1Q6DN14 999 aa29.81■■■□□ 2.36
DDX42-201ENST00000359353 CHMP4BQ9H444 224 aaKnown RBP29.81■■■□□ 2.36
DDX42-201ENST00000359353 CDC42BPGQ6DT37 1551 aa29.8■■■□□ 2.36
DDX42-201ENST00000359353 API5Q9BZZ5 524 aaKnown RBP29.8■■■□□ 2.36
DDX42-201ENST00000359353 TTC22Q5TAA0 569 aa29.79■■■□□ 2.36
DDX42-201ENST00000359353 SKOR2Q2VWA4 1001 aaPredicted RBP29.78■■■□□ 2.36
DDX42-201ENST00000359353 MCM10Q7L590 875 aa29.78■■■□□ 2.36
DDX42-201ENST00000359353 RIMS2Q9UQ26 1411 aa29.78■■■□□ 2.36
DDX42-201ENST00000359353 SOX12O15370 315 aa29.77■■■□□ 2.36
DDX42-201ENST00000359353 TXNDC2Q86VQ3 553 aa29.77■■■□□ 2.36
DDX42-201ENST00000359353 DCTPP1Q9H773 170 aa29.77■■■□□ 2.36
DDX42-201ENST00000359353 MLECQ14165 292 aa29.75■■■□□ 2.35
DDX42-201ENST00000359353 FOXD4L5Q5VV16 416 aaPredicted RBP29.75■■■□□ 2.35
DDX42-201ENST00000359353 ZGPATQ8N5A5 531 aaKnown RBP29.75■■■□□ 2.35
DDX42-201ENST00000359353 FOXD4L4Q8WXT5 416 aaPredicted RBP29.75■■■□□ 2.35
DDX42-201ENST00000359353 GOLGA6L22H0YM25 854 aa29.75■■■□□ 2.35
DDX42-201ENST00000359353 MIS18AQ9NYP9 233 aa29.75■■■□□ 2.35
DDX42-201ENST00000359353 NUTM2FA1L443 756 aa29.74■■■□□ 2.35
DDX42-201ENST00000359353 NASPP49321 788 aaPredicted RBP29.74■■■□□ 2.35
DDX42-201ENST00000359353 COG3Q96JB2 828 aa29.74■■■□□ 2.35
DDX42-201ENST00000359353 USP26Q9BXU7 913 aa29.74■■■□□ 2.35
DDX42-201ENST00000359353 SDSP20132 328 aa29.74■■■□□ 2.35
DDX42-201ENST00000359353 CAVIN1Q6NZI2 390 aaKnown RBP29.74■■■□□ 2.35
DDX42-201ENST00000359353 MEIS3Q99687 375 aa29.74■■■□□ 2.35
DDX42-201ENST00000359353 ISY1Q9ULR0 285 aaKnown RBP29.73■■■□□ 2.35
DDX42-201ENST00000359353 SULT6B1Q6IMI4 303 aa29.72■■■□□ 2.35
DDX42-201ENST00000359353 RABEP1Q15276 862 aa29.71■■■□□ 2.35
DDX42-201ENST00000359353 MSH6P52701 1360 aa29.71■■■□□ 2.35
DDX42-201ENST00000359353 TSHZ3Q63HK5 1081 aa29.7■■■□□ 2.35
DDX42-201ENST00000359353 WASLO00401 505 aaPredicted RBP29.7■■■□□ 2.34
DDX42-201ENST00000359353 CEP85Q6P2H3 762 aa29.7■■■□□ 2.34
DDX42-201ENST00000359353 LMOD3Q0VAK6 560 aa29.69■■■□□ 2.34
DDX42-201ENST00000359353 ANKRD44Q8N8A2 993 aa29.69■■■□□ 2.34
DDX42-201ENST00000359353 NUDT16Q96DE0 195 aaKnown RBP29.69■■■□□ 2.34
DDX42-201ENST00000359353 CPS1P31327 1500 aa29.69■■■□□ 2.34
DDX42-201ENST00000359353 KLHL40Q2TBA0 621 aa29.69■■■□□ 2.34
DDX42-201ENST00000359353 NEO1Q92859 1461 aa29.68■■■□□ 2.34
DDX42-201ENST00000359353 RBM27Q9P2N5 1060 aaKnown RBP29.68■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms