RNA–Protein interactions for RNA: ENST00000326195.12

ABCF1-201, Transcript of ATP binding cassette subfamily F member 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene ABCF1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-201ENST00000326195 HSP90AA2PQ14568 343 aaPredicted RBP13.23□□□□□ -0.29
ABCF1-201ENST00000326195 NKTRP30414 1462 aaKnown RBP13.23□□□□□ -0.29
ABCF1-201ENST00000326195 NAP1L5Q96NT1 182 aaPredicted RBP13.23□□□□□ -0.29
ABCF1-201ENST00000326195 POLR1AO95602 1720 aaPredicted RBP13.23□□□□□ -0.29
ABCF1-201ENST00000326195 BRD4O60885 1362 aaPredicted RBP13.22□□□□□ -0.29
ABCF1-201ENST00000326195 AEBP1Q8IUX7 1158 aa13.22□□□□□ -0.29
ABCF1-201ENST00000326195 MAP3K19Q56UN5 1328 aa13.22□□□□□ -0.29
ABCF1-201ENST00000326195 CDCA7LQ96GN5 454 aa13.22□□□□□ -0.29
ABCF1-201ENST00000326195 LAMC1P11047 1609 aa13.22□□□□□ -0.29
ABCF1-201ENST00000326195 CPS1P31327 1500 aa13.21□□□□□ -0.3
ABCF1-201ENST00000326195 DIAPH1O60610 1272 aaKnown RBP13.21□□□□□ -0.3
ABCF1-201ENST00000326195 SULT6B1Q6IMI4 303 aa13.21□□□□□ -0.3
ABCF1-201ENST00000326195 CRBNQ96SW2 442 aa13.21□□□□□ -0.3
ABCF1-201ENST00000326195 KIAA1210Q9ULL0 1709 aa13.2□□□□□ -0.3
ABCF1-201ENST00000326195 MST1RQ04912 1400 aa13.2□□□□□ -0.3
ABCF1-201ENST00000326195 RGPD8O14715 1765 aaPredicted RBP13.2□□□□□ -0.3
ABCF1-201ENST00000326195 NGLY1Q96IV0 654 aa13.2□□□□□ -0.3
ABCF1-201ENST00000326195 USP6P35125 1406 aa13.2□□□□□ -0.3
ABCF1-201ENST00000326195 STRCP1A6NGW2 1772 aa13.2□□□□□ -0.3
ABCF1-201ENST00000326195 APAF1O14727 1248 aa13.2□□□□□ -0.3
ABCF1-201ENST00000326195 AXIN2Q9Y2T1 843 aa13.2□□□□□ -0.3
ABCF1-201ENST00000326195 KDM5AP29375 1690 aaKnown RBP13.2□□□□□ -0.3
ABCF1-201ENST00000326195 PDE3BQ13370 1112 aa13.19□□□□□ -0.3
ABCF1-201ENST00000326195 C8orf34Q49A92 452 aa13.19□□□□□ -0.3
ABCF1-201ENST00000326195 CHD2O14647 1828 aaKnown RBP13.19□□□□□ -0.3
ABCF1-201ENST00000326195 SETD1AO15047 1707 aaKnown RBP13.19□□□□□ -0.3
ABCF1-201ENST00000326195 DLC1Q96QB1 1528 aa13.18□□□□□ -0.3
ABCF1-201ENST00000326195 CANXP27824 592 aaKnown RBP13.18□□□□□ -0.3
ABCF1-201ENST00000326195 C20orf194Q5TEA3 1177 aa13.18□□□□□ -0.3
ABCF1-201ENST00000326195 TOM1L2Q6ZVM7 507 aa13.18□□□□□ -0.3
ABCF1-201ENST00000326195 KAT6BQ8WYB5 2073 aa13.18□□□□□ -0.3
ABCF1-201ENST00000326195 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.17□□□□□ -0.3
ABCF1-201ENST00000326195 THUMPD2Q9BTF0 503 aaKnown RBP13.17□□□□□ -0.3
ABCF1-201ENST00000326195 BTG4Q9NY30 223 aa13.17□□□□□ -0.3
ABCF1-201ENST00000326195 CD163L1Q9NR16 1453 aa13.17□□□□□ -0.3
ABCF1-201ENST00000326195 PRKAR2BP31323 418 aa13.16□□□□□ -0.3
ABCF1-201ENST00000326195 EDC4Q6P2E9 1401 aaKnown RBP13.16□□□□□ -0.3
ABCF1-201ENST00000326195 HSP90AA1P07900 732 aaKnown RBP13.16□□□□□ -0.3
ABCF1-201ENST00000326195 DCTN1Q14203 1278 aa13.16□□□□□ -0.3
ABCF1-201ENST00000326195 PUS7Q96PZ0 661 aaKnown RBP13.16□□□□□ -0.3
ABCF1-201ENST00000326195 PANK2Q9BZ23 570 aa13.16□□□□□ -0.3
ABCF1-201ENST00000326195 SRCAPQ6ZRS2 3230 aa13.16□□□□□ -0.3
ABCF1-201ENST00000326195 SPATA31A3Q5VYP0 1347 aa13.16□□□□□ -0.3
ABCF1-201ENST00000326195 KIAA0232Q92628 1395 aa13.15□□□□□ -0.3
ABCF1-201ENST00000326195 RRP9O43818 475 aaKnown RBP13.15□□□□□ -0.3
ABCF1-201ENST00000326195 EIF4A2Q14240 407 aaKnown RBP13.15□□□□□ -0.3
ABCF1-201ENST00000326195 NALCNQ8IZF0 1738 aa13.15□□□□□ -0.3
ABCF1-201ENST00000326195 FAM83GA6ND36 823 aa13.14□□□□□ -0.31
ABCF1-201ENST00000326195 FAM182BQ5T319 152 aa13.14□□□□□ -0.31
ABCF1-201ENST00000326195 ANKRD24Q8TF21 1146 aa13.14□□□□□ -0.31
ABCF1-201ENST00000326195 PNNQ9H307 717 aaKnown RBP13.14□□□□□ -0.31
ABCF1-201ENST00000326195 MAPK8IP3Q9UPT6 1336 aa13.14□□□□□ -0.31
ABCF1-201ENST00000326195 DDX54Q8TDD1 881 aaKnown RBP13.14□□□□□ -0.31
ABCF1-201ENST00000326195 CPSF1Q10570 1443 aaKnown RBP13.14□□□□□ -0.31
ABCF1-201ENST00000326195 XRN1Q8IZH2 1706 aaKnown RBP13.14□□□□□ -0.31
ABCF1-201ENST00000326195 XRCC6P12956 609 aaKnown RBP eCLIP13.14□□□□□ -0.312e-6■□□□□ 9.4
ABCF1-201ENST00000326195 TTC21AQ8NDW8 1320 aa13.13□□□□□ -0.31
ABCF1-201ENST00000326195 HOXC9P31274 260 aa13.13□□□□□ -0.31
ABCF1-201ENST00000326195 PARD3Q8TEW0 1356 aa13.13□□□□□ -0.31
ABCF1-201ENST00000326195 KDM2BQ8NHM5 1336 aa13.12□□□□□ -0.31
ABCF1-201ENST00000326195 ELL2O00472 640 aaPredicted RBP13.12□□□□□ -0.31
ABCF1-201ENST00000326195 FAM161AQ3B820 660 aa13.12□□□□□ -0.31
ABCF1-201ENST00000326195 NBPF6Q5VWK0 638 aa13.12□□□□□ -0.31
ABCF1-201ENST00000326195 PHACTR3Q96KR7 559 aa13.12□□□□□ -0.31
ABCF1-201ENST00000326195 NBPF4Q96M43 638 aa13.12□□□□□ -0.31
ABCF1-201ENST00000326195 EYA1Q99502 592 aa13.12□□□□□ -0.31
ABCF1-201ENST00000326195 NINLQ9Y2I6 1382 aa13.12□□□□□ -0.31
ABCF1-201ENST00000326195 LARP1Q6PKG0 1096 aaKnown RBP13.12□□□□□ -0.31
ABCF1-201ENST00000326195 KCNH5Q8NCM2 988 aa13.12□□□□□ -0.31
ABCF1-201ENST00000326195 SLKQ9H2G2 1235 aaPredicted RBP13.11□□□□□ -0.31
ABCF1-201ENST00000326195 MIS18AQ9NYP9 233 aa13.11□□□□□ -0.31
ABCF1-201ENST00000326195 RGS3P49796 1198 aa13.11□□□□□ -0.31
ABCF1-201ENST00000326195 POLR3AO14802 1390 aaPredicted RBP13.11□□□□□ -0.31
ABCF1-201ENST00000326195 CLCN1P35523 988 aa13.1□□□□□ -0.31
ABCF1-201ENST00000326195 TCP11L2Q8N4U5 519 aa13.1□□□□□ -0.31
ABCF1-201ENST00000326195 SYTL4Q96C24 671 aaPredicted RBP13.1□□□□□ -0.31
ABCF1-201ENST00000326195 ANKARQ7Z5J8 1434 aa13.1□□□□□ -0.31
ABCF1-201ENST00000326195 SOS2Q07890 1332 aaPredicted RBP13.09□□□□□ -0.31
ABCF1-201ENST00000326195 ARHGEF25Q86VW2 580 aa13.09□□□□□ -0.31
ABCF1-201ENST00000326195 RIPK4P57078 832 aa13.08□□□□□ -0.32
ABCF1-201ENST00000326195 GOLGA2Q08379 1002 aa13.08□□□□□ -0.32
ABCF1-201ENST00000326195 USP19O94966 1318 aa13.08□□□□□ -0.32
ABCF1-201ENST00000326195 MCM10Q7L590 875 aa13.08□□□□□ -0.32
ABCF1-201ENST00000326195 GZF1Q9H116 711 aaPredicted RBP13.08□□□□□ -0.32
ABCF1-201ENST00000326195 SEC24BO95487 1268 aa13.07□□□□□ -0.32
ABCF1-201ENST00000326195 A0A0U1RQG5 324 aaPredicted RBP13.07□□□□□ -0.32
ABCF1-201ENST00000326195 ZNF428Q96B54 188 aa13.07□□□□□ -0.32
ABCF1-201ENST00000326195 USP32Q8NFA0 1604 aa13.07□□□□□ -0.32
ABCF1-201ENST00000326195 RAPGEF4Q8WZA2 1011 aa13.07□□□□□ -0.32
ABCF1-201ENST00000326195 IP6K1Q92551 441 aa13.06□□□□□ -0.32
ABCF1-201ENST00000326195 NECTIN2Q92692 538 aa13.06□□□□□ -0.32
ABCF1-201ENST00000326195 IL13P35225 146 aa13.06□□□□□ -0.32
ABCF1-201ENST00000326195 ERBB4Q15303 1308 aa13.06□□□□□ -0.32
ABCF1-201ENST00000326195 LTBP4Q8N2S1 1624 aa13.06□□□□□ -0.32
ABCF1-201ENST00000326195 FAM98CQ17RN3 349 aaKnown RBP13.05□□□□□ -0.32
ABCF1-201ENST00000326195 L1TD1Q5T7N2 865 aaKnown RBP13.05□□□□□ -0.32
ABCF1-201ENST00000326195 MPRIPQ6WCQ1 1025 aa13.05□□□□□ -0.32
ABCF1-201ENST00000326195 PHF23Q9BUL5 403 aaPredicted RBP13.05□□□□□ -0.32
ABCF1-201ENST00000326195 CDC42BPGQ6DT37 1551 aa13.05□□□□□ -0.32
ABCF1-201ENST00000326195 MYOM1P52179 1685 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms