RNA–Protein interactions for RNA: ENST00000316399.10

SOX6-201, Transcript of SRY-box 6, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SOX6, Length 8,808 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-201ENST00000316399 CTNNA3Q9UI47 895 aa8.62□□□□□ -1.03
SOX6-201ENST00000316399 PRAG1Q86YV5 1406 aa8.61□□□□□ -1.03
SOX6-201ENST00000316399 SOS1Q07889 1333 aaPredicted RBP8.61□□□□□ -1.03
SOX6-201ENST00000316399 BMP2KLQ5H9B9 411 aa8.61□□□□□ -1.03
SOX6-201ENST00000316399 LUC7LQ9NQ29 371 aaKnown RBP8.61□□□□□ -1.03
SOX6-201ENST00000316399 CFAP45Q9UL16 551 aa8.61□□□□□ -1.03
SOX6-201ENST00000316399 RDXP35241 583 aaKnown RBP8.61□□□□□ -1.03
SOX6-201ENST00000316399 SMARCE1Q969G3 411 aa8.61□□□□□ -1.03
SOX6-201ENST00000316399 FOXD4L1Q9NU39 408 aa8.61□□□□□ -1.03
SOX6-201ENST00000316399 TUBB4AP04350 444 aa8.61□□□□□ -1.03
SOX6-201ENST00000316399 SLC3A2P08195 630 aaKnown RBP8.61□□□□□ -1.03
SOX6-201ENST00000316399 PSME1Q06323 249 aa8.61□□□□□ -1.03
SOX6-201ENST00000316399 ZSCAN30Q86W11 494 aa8.61□□□□□ -1.03
SOX6-201ENST00000316399 PTPRCP08575 1304 aa8.61□□□□□ -1.03
SOX6-201ENST00000316399 HOMER1Q86YM7 354 aa8.61□□□□□ -1.03
SOX6-201ENST00000316399 GRPEL1Q9HAV7 217 aa8.61□□□□□ -1.03
SOX6-201ENST00000316399 WASF1Q92558 559 aa8.6□□□□□ -1.03
SOX6-201ENST00000316399 SCAND2PQ9GZW5 306 aaPredicted RBP8.6□□□□□ -1.03
SOX6-201ENST00000316399 DCTN1Q14203 1278 aa8.6□□□□□ -1.03
SOX6-201ENST00000316399 THEMISQ8N1K5 641 aaPredicted RBP8.6□□□□□ -1.03
SOX6-201ENST00000316399 ERLIN1O75477 346 aa8.6□□□□□ -1.03
SOX6-201ENST00000316399 MCM4P33991 863 aa8.6□□□□□ -1.03
SOX6-201ENST00000316399 NEK4P51957 841 aa8.6□□□□□ -1.03
SOX6-201ENST00000316399 GGNBP2Q9H3C7 697 aa8.6□□□□□ -1.03
SOX6-201ENST00000316399 NUP153P49790 1475 aaKnown RBP8.6□□□□□ -1.03
SOX6-201ENST00000316399 NBPF1Q3BBV0 1214 aa8.6□□□□□ -1.03
SOX6-201ENST00000316399 TXLNAP40222 546 aa8.59□□□□□ -1.03
SOX6-201ENST00000316399 AFAP1Q8N556 730 aa8.59□□□□□ -1.03
SOX6-201ENST00000316399 GTF2E1P29083 439 aaPredicted RBP8.59□□□□□ -1.03
SOX6-201ENST00000316399 CABP2Q9NPB3 220 aa8.59□□□□□ -1.03
SOX6-201ENST00000316399 UNC13AQ9UPW8 1703 aa8.59□□□□□ -1.03
SOX6-201ENST00000316399 ELL2O00472 640 aaPredicted RBP8.59□□□□□ -1.03
SOX6-201ENST00000316399 MARCH6O60337 910 aa8.59□□□□□ -1.03
SOX6-201ENST00000316399 HDAC1Q13547 482 aaPredicted RBP8.59□□□□□ -1.03
SOX6-201ENST00000316399 GNL3LQ9NVN8 582 aaKnown RBP8.59□□□□□ -1.03
SOX6-201ENST00000316399 NOB1Q9ULX3 412 aaKnown RBP8.59□□□□□ -1.03
SOX6-201ENST00000316399 GCC2Q8IWJ2 1684 aa8.59□□□□□ -1.03
SOX6-201ENST00000316399 SLC4A3P48751 1232 aa8.59□□□□□ -1.03
SOX6-201ENST00000316399 FRAT2O75474 233 aaPredicted RBP8.59□□□□□ -1.03
SOX6-201ENST00000316399 RUFY1Q96T51 708 aa8.59□□□□□ -1.03
SOX6-201ENST00000316399 CDCA7LQ96GN5 454 aa8.58□□□□□ -1.04
SOX6-201ENST00000316399 SDF4Q9BRK5 362 aa8.58□□□□□ -1.04
SOX6-201ENST00000316399 NACAP1Q9BZK3 213 aa8.58□□□□□ -1.04
SOX6-201ENST00000316399 ZNF330Q9Y3S2 320 aaPredicted RBP8.58□□□□□ -1.04
SOX6-201ENST00000316399 COL17A1Q9UMD9 1497 aaPredicted RBP8.58□□□□□ -1.04
SOX6-201ENST00000316399 NUTM2DQ5VT03 806 aaPredicted RBP8.58□□□□□ -1.04
SOX6-201ENST00000316399 TSPYL1Q9H0U9 437 aa8.58□□□□□ -1.04
SOX6-201ENST00000316399 NFXL1Q6ZNB6 911 aa8.58□□□□□ -1.04
SOX6-201ENST00000316399 ESPNB1AK53 854 aa8.58□□□□□ -1.04
SOX6-201ENST00000316399 CLSTN1O94985 981 aa8.58□□□□□ -1.04
SOX6-201ENST00000316399 HMGB1P09429 215 aaKnown RBP8.58□□□□□ -1.04
SOX6-201ENST00000316399 TRIM22Q8IYM9 498 aa8.58□□□□□ -1.04
SOX6-201ENST00000316399 KCNH5Q8NCM2 988 aa8.58□□□□□ -1.04
SOX6-201ENST00000316399 TRIM5Q9C035 493 aa8.58□□□□□ -1.04
SOX6-201ENST00000316399 PLCH2O75038 1416 aa8.58□□□□□ -1.04
SOX6-201ENST00000316399 RARSP54136 660 aaKnown RBP8.58□□□□□ -1.04
SOX6-201ENST00000316399 HS1BP3Q53T59 392 aa8.58□□□□□ -1.04
SOX6-201ENST00000316399 KDM5BQ9UGL1 1544 aa8.58□□□□□ -1.04
SOX6-201ENST00000316399 ZNF518AQ6AHZ1 1483 aa8.58□□□□□ -1.04
SOX6-201ENST00000316399 MAST1Q9Y2H9 1570 aa8.58□□□□□ -1.04
SOX6-201ENST00000316399 ZNF771Q7L3S4 317 aaPredicted RBP8.57□□□□□ -1.04
SOX6-201ENST00000316399 PRAM1Q96QH2 718 aa8.57□□□□□ -1.04
SOX6-201ENST00000316399 PLEKHG5O94827 1062 aa8.57□□□□□ -1.04
SOX6-201ENST00000316399 FILIP1LQ4L180 1135 aa8.57□□□□□ -1.04
SOX6-201ENST00000316399 SAMD9Q5K651 1589 aa8.57□□□□□ -1.04
SOX6-201ENST00000316399 SURF6O75683 361 aaKnown RBP8.57□□□□□ -1.04
SOX6-201ENST00000316399 CTAGE5O15320 804 aa8.57□□□□□ -1.04
SOX6-201ENST00000316399 NLRP6P59044 892 aa8.57□□□□□ -1.04
SOX6-201ENST00000316399 MX1P20591 662 aa8.57□□□□□ -1.04
SOX6-201ENST00000316399 PHAXQ9H814 394 aaKnown RBP8.57□□□□□ -1.04
SOX6-201ENST00000316399 FANCAO15360 1455 aa8.57□□□□□ -1.04
SOX6-201ENST00000316399 KLHL34Q8N239 644 aa8.56□□□□□ -1.04
SOX6-201ENST00000316399 CCDC112Q8NEF3 446 aa8.56□□□□□ -1.04
SOX6-201ENST00000316399 HDGFL1Q5TGJ6 251 aa8.56□□□□□ -1.04
SOX6-201ENST00000316399 LTV1Q96GA3 475 aaPredicted RBP8.56□□□□□ -1.04
SOX6-201ENST00000316399 DENND4BO75064 1496 aaPredicted RBP8.56□□□□□ -1.04
SOX6-201ENST00000316399 STK38Q15208 465 aa8.56□□□□□ -1.04
SOX6-201ENST00000316399 AMOTQ4VCS5 1084 aa8.56□□□□□ -1.04
SOX6-201ENST00000316399 RIC3Q7Z5B4 369 aa8.56□□□□□ -1.04
SOX6-201ENST00000316399 EIF2S2P20042 333 aaKnown RBP8.56□□□□□ -1.04
SOX6-201ENST00000316399 ANAPC15P60006 121 aa8.56□□□□□ -1.04
SOX6-201ENST00000316399 EIF3JO75822 258 aaKnown RBP8.56□□□□□ -1.04
SOX6-201ENST00000316399 GLRX3O76003 335 aaKnown RBP8.56□□□□□ -1.04
SOX6-201ENST00000316399 STIM1Q13586 685 aa8.56□□□□□ -1.04
SOX6-201ENST00000316399 SPG7Q9UQ90 795 aa8.56□□□□□ -1.04
SOX6-201ENST00000316399 SMTNL1A8MU46 457 aa8.56□□□□□ -1.04
SOX6-201ENST00000316399 TRHP20396 242 aaPredicted RBP8.56□□□□□ -1.04
SOX6-201ENST00000316399 CALRP27797 417 aaKnown RBP8.56□□□□□ -1.04
SOX6-201ENST00000316399 TMPOP42166 694 aaKnown RBP8.56□□□□□ -1.04
SOX6-201ENST00000316399 CCDC61Q9Y6R9 512 aa8.56□□□□□ -1.04
SOX6-201ENST00000316399 CDK19Q9BWU1 502 aa8.55□□□□□ -1.04
SOX6-201ENST00000316399 UVSSAQ2YD98 709 aa8.55□□□□□ -1.04
SOX6-201ENST00000316399 CCDC158Q5M9N0 1113 aa8.55□□□□□ -1.04
SOX6-201ENST00000316399 ABCC10Q5T3U5 1492 aa8.55□□□□□ -1.04
SOX6-201ENST00000316399 SLC4A2P04920 1241 aa8.55□□□□□ -1.04
SOX6-201ENST00000316399 C14orf93Q9H972 538 aaKnown RBP8.55□□□□□ -1.04
SOX6-201ENST00000316399 VPS37DQ86XT2 251 aa8.55□□□□□ -1.04
SOX6-201ENST00000316399 MCM3P25205 808 aa8.55□□□□□ -1.04
SOX6-201ENST00000316399 GBP3Q9H0R5 595 aa8.55□□□□□ -1.04
SOX6-201ENST00000316399 HMG20BQ9P0W2 317 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms