RNA–Protein interactions for RNA: ENST00000289495.7

PPP1R9A-201, Transcript of protein phosphatase 1 regulatory subunit 9A, humanhuman

TSL 1 (best) BASIC

Gene PPP1R9A, Length 3,983 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R9A-201ENST00000289495 BECN1Q14457 450 aa6.16□□□□□ -1.42
PPP1R9A-201ENST00000289495 EDC4Q6P2E9 1401 aaKnown RBP6.16□□□□□ -1.42
PPP1R9A-201ENST00000289495 LMOD3Q0VAK6 560 aa6.16□□□□□ -1.42
PPP1R9A-201ENST00000289495 TXNDC2Q86VQ3 553 aa6.16□□□□□ -1.42
PPP1R9A-201ENST00000289495 USP35Q9P2H5 1018 aa6.16□□□□□ -1.42
PPP1R9A-201ENST00000289495 CD163L1Q9NR16 1453 aa6.16□□□□□ -1.42
PPP1R9A-201ENST00000289495 RLBP1P12271 317 aa6.15□□□□□ -1.42
PPP1R9A-201ENST00000289495 ZMYM3Q14202 1370 aa6.15□□□□□ -1.42
PPP1R9A-201ENST00000289495 NLRP1Q9C000 1473 aa6.15□□□□□ -1.42
PPP1R9A-201ENST00000289495 HAX1O00165 279 aa6.15□□□□□ -1.43
PPP1R9A-201ENST00000289495 PLEKHF1Q96S99 279 aa6.15□□□□□ -1.43
PPP1R9A-201ENST00000289495 CHMP4BQ9H444 224 aaKnown RBP6.15□□□□□ -1.43
PPP1R9A-201ENST00000289495 TNNQ9UQP3 1299 aa6.15□□□□□ -1.43
PPP1R9A-201ENST00000289495 LRRC7Q96NW7 1537 aa6.15□□□□□ -1.43
PPP1R9A-201ENST00000289495 HMOX1P09601 288 aa6.15□□□□□ -1.43
PPP1R9A-201ENST00000289495 ATF7IPQ6VMQ6 1270 aa6.15□□□□□ -1.43
PPP1R9A-201ENST00000289495 RASEFQ8IZ41 740 aa6.15□□□□□ -1.43
PPP1R9A-201ENST00000289495 NUDT16Q96DE0 195 aaKnown RBP6.15□□□□□ -1.43
PPP1R9A-201ENST00000289495 PDZRN3Q9UPQ7 1066 aa6.15□□□□□ -1.43
PPP1R9A-201ENST00000289495 SSH1Q8WYL5 1049 aa6.14□□□□□ -1.43
PPP1R9A-201ENST00000289495 TRIM35Q9UPQ4 493 aa6.14□□□□□ -1.43
PPP1R9A-201ENST00000289495 CCDC61Q9Y6R9 512 aa6.14□□□□□ -1.43
PPP1R9A-201ENST00000289495 NFE2L2Q16236 605 aa6.14□□□□□ -1.43
PPP1R9A-201ENST00000289495 NME9Q86XW9 330 aa6.14□□□□□ -1.43
PPP1R9A-201ENST00000289495 POLKQ9UBT6 870 aa6.14□□□□□ -1.43
PPP1R9A-201ENST00000289495 TRIM27P14373 513 aa6.14□□□□□ -1.43
PPP1R9A-201ENST00000289495 SLC4A3P48751 1232 aa6.14□□□□□ -1.43
PPP1R9A-201ENST00000289495 GNAI1P63096 354 aa6.14□□□□□ -1.43
PPP1R9A-201ENST00000289495 PCDHB15Q9Y5E8 787 aa6.14□□□□□ -1.43
PPP1R9A-201ENST00000289495 EMILIN1Q9Y6C2 1016 aa6.14□□□□□ -1.43
PPP1R9A-201ENST00000289495 PNPLA6Q8IY17 1366 aa6.14□□□□□ -1.43
PPP1R9A-201ENST00000289495 CDK12Q9NYV4 1490 aaPredicted RBP6.13□□□□□ -1.43
PPP1R9A-201ENST00000289495 FAM135BQ49AJ0 1406 aa6.13□□□□□ -1.43
PPP1R9A-201ENST00000289495 METP08581 1390 aa6.13□□□□□ -1.43
PPP1R9A-201ENST00000289495 ZNF428Q96B54 188 aa6.13□□□□□ -1.43
PPP1R9A-201ENST00000289495 ALDH1L2Q3SY69 923 aa6.13□□□□□ -1.43
PPP1R9A-201ENST00000289495 RSPH6AQ9H0K4 717 aa6.13□□□□□ -1.43
PPP1R9A-201ENST00000289495 NOB1Q9ULX3 412 aaKnown RBP6.13□□□□□ -1.43
PPP1R9A-201ENST00000289495 EID1Q9Y6B2 187 aa6.13□□□□□ -1.43
PPP1R9A-201ENST00000289495 CDC42BPGQ6DT37 1551 aa6.13□□□□□ -1.43
PPP1R9A-201ENST00000289495 FARP1Q9Y4F1 1045 aaPredicted RBP6.13□□□□□ -1.43
PPP1R9A-201ENST00000289495 VIRMAQ69YN4 1812 aaKnown RBP6.12□□□□□ -1.43
PPP1R9A-201ENST00000289495 ITSN1Q15811 1721 aa6.12□□□□□ -1.43
PPP1R9A-201ENST00000289495 TMEM2Q9UHN6 1383 aa6.12□□□□□ -1.43
PPP1R9A-201ENST00000289495 MNX1P50219 401 aaPredicted RBP6.12□□□□□ -1.43
PPP1R9A-201ENST00000289495 HAP1P54257 671 aaPredicted RBP6.12□□□□□ -1.43
PPP1R9A-201ENST00000289495 POTEHQ6S545 545 aa6.12□□□□□ -1.43
PPP1R9A-201ENST00000289495 BCL11AQ9H165 835 aa6.12□□□□□ -1.43
PPP1R9A-201ENST00000289495 SETD1AO15047 1707 aaKnown RBP6.12□□□□□ -1.43
PPP1R9A-201ENST00000289495 KNDC1Q76NI1 1749 aa6.12□□□□□ -1.43
PPP1R9A-201ENST00000289495 PYGBP11216 843 aa6.12□□□□□ -1.43
PPP1R9A-201ENST00000289495 TMEM57Q8N5G2 664 aa6.12□□□□□ -1.43
PPP1R9A-201ENST00000289495 SIRT1Q96EB6 747 aa6.12□□□□□ -1.43
PPP1R9A-201ENST00000289495 AATKQ6ZMQ8 1374 aa6.12□□□□□ -1.43
PPP1R9A-201ENST00000289495 CPS1P31327 1500 aa6.11□□□□□ -1.43
PPP1R9A-201ENST00000289495 FBLN1P23142 703 aa6.11□□□□□ -1.43
PPP1R9A-201ENST00000289495 RRS1Q15050 365 aaKnown RBP6.11□□□□□ -1.43
PPP1R9A-201ENST00000289495 IFT57Q9NWB7 429 aa6.11□□□□□ -1.43
PPP1R9A-201ENST00000289495 CPSF1Q10570 1443 aaKnown RBP6.11□□□□□ -1.43
PPP1R9A-201ENST00000289495 NUTM2FA1L443 756 aa6.11□□□□□ -1.43
PPP1R9A-201ENST00000289495 TECPR2O15040 1411 aa6.11□□□□□ -1.43
PPP1R9A-201ENST00000289495 NRXN3Q9Y4C0 1643 aa6.11□□□□□ -1.43
PPP1R9A-201ENST00000289495 FXR2P51116 673 aaKnown RBP eCLIP6.11□□□□□ -1.435e-7■■■□□ 15.8
PPP1R9A-201ENST00000289495 MAP2P11137 1827 aaKnown RBP6.11□□□□□ -1.43
PPP1R9A-201ENST00000289495 HDAC1Q13547 482 aaPredicted RBP6.1□□□□□ -1.43
PPP1R9A-201ENST00000289495 THUMPD2Q9BTF0 503 aaKnown RBP6.1□□□□□ -1.43
PPP1R9A-201ENST00000289495 SOX12O15370 315 aa6.1□□□□□ -1.43
PPP1R9A-201ENST00000289495 IL13P35225 146 aa6.1□□□□□ -1.43
PPP1R9A-201ENST00000289495 API5Q9BZZ5 524 aaKnown RBP6.1□□□□□ -1.43
PPP1R9A-201ENST00000289495 ZRANB1Q9UGI0 708 aa6.1□□□□□ -1.43
PPP1R9A-201ENST00000289495 MON2Q7Z3U7 1717 aa6.1□□□□□ -1.43
PPP1R9A-201ENST00000289495 ELL2O00472 640 aaPredicted RBP6.1□□□□□ -1.43
PPP1R9A-201ENST00000289495 NFKBIBQ15653 356 aa6.1□□□□□ -1.43
PPP1R9A-201ENST00000289495 TWISTNBQ3B726 338 aaPredicted RBP6.1□□□□□ -1.43
PPP1R9A-201ENST00000289495 KIF13AQ9H1H9 1805 aa6.1□□□□□ -1.43
PPP1R9A-201ENST00000289495 MFAP1P55081 439 aaKnown RBP6.09□□□□□ -1.43
PPP1R9A-201ENST00000289495 PLEKHG1Q9ULL1 1385 aa6.09□□□□□ -1.43
PPP1R9A-201ENST00000289495 NCKAP5LQ9HCH0 1330 aa6.09□□□□□ -1.43
PPP1R9A-201ENST00000289495 PHACTR3Q96KR7 559 aa6.09□□□□□ -1.43
PPP1R9A-201ENST00000289495 TTC21BQ7Z4L5 1316 aa6.09□□□□□ -1.43
PPP1R9A-201ENST00000289495 ROBO2Q9HCK4 1378 aa6.09□□□□□ -1.43
PPP1R9A-201ENST00000289495 NGDNQ8NEJ9 315 aaKnown RBP6.09□□□□□ -1.43
PPP1R9A-201ENST00000289495 ACEP12821 1306 aa6.09□□□□□ -1.44
PPP1R9A-201ENST00000289495 UBR1Q8IWV7 1749 aa6.09□□□□□ -1.44
PPP1R9A-201ENST00000289495 PLEKHG5O94827 1062 aa6.08□□□□□ -1.44
PPP1R9A-201ENST00000289495 DCAF8Q5TAQ9 597 aa6.08□□□□□ -1.44
PPP1R9A-201ENST00000289495 SULT6B1Q6IMI4 303 aa6.08□□□□□ -1.44
PPP1R9A-201ENST00000289495 SLC26A8Q96RN1 970 aa6.08□□□□□ -1.44
PPP1R9A-201ENST00000289495 MBIPQ9NS73 344 aa6.08□□□□□ -1.44
PPP1R9A-201ENST00000289495 PRR36Q9H6K5 1346 aa6.08□□□□□ -1.44
PPP1R9A-201ENST00000289495 CFAP44Q96MT7 982 aa6.08□□□□□ -1.44
PPP1R9A-201ENST00000289495 SLKQ9H2G2 1235 aaPredicted RBP6.08□□□□□ -1.44
PPP1R9A-201ENST00000289495 ZBTB40Q9NUA8 1239 aa6.08□□□□□ -1.44
PPP1R9A-201ENST00000289495 SMC5Q8IY18 1101 aa6.08□□□□□ -1.44
PPP1R9A-201ENST00000289495 RTF1Q92541 710 aaKnown RBP6.08□□□□□ -1.44
PPP1R9A-201ENST00000289495 ARHGAP45Q92619 1136 aa6.08□□□□□ -1.44
PPP1R9A-201ENST00000289495 TBC1D32Q96NH3 1257 aa6.08□□□□□ -1.44
PPP1R9A-201ENST00000289495 LNPKQ9C0E8 428 aa6.08□□□□□ -1.44
PPP1R9A-201ENST00000289495 AKAP12Q02952 1782 aa6.08□□□□□ -1.44
PPP1R9A-201ENST00000289495 MRPL50Q8N5N7 158 aaKnown RBP6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms