RNA–Protein interactions for RNA: ENST00000289495.7

PPP1R9A-201, Transcript of protein phosphatase 1 regulatory subunit 9A, humanhuman

TSL 1 (best) BASIC

Gene PPP1R9A, Length 3,983 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R9A-201ENST00000289495 AEBP2Q6ZN18 517 aaPredicted RBP11.74□□□□□ -0.53
PPP1R9A-201ENST00000289495 CHIC1Q5VXU3 224 aa11.23□□□□□ -0.61
PPP1R9A-201ENST00000289495 NISCHQ9Y2I1 1504 aa10.1□□□□□ -0.79
PPP1R9A-201ENST00000289495 PHF23Q9BUL5 403 aaPredicted RBP10.06□□□□□ -0.8
PPP1R9A-201ENST00000289495 SENP3Q9H4L4 574 aaPredicted RBP9.7□□□□□ -0.86
PPP1R9A-201ENST00000289495 FOXD1Q16676 465 aa9.2□□□□□ -0.94
PPP1R9A-201ENST00000289495 PLPPR3Q6T4P5 718 aa9.1□□□□□ -0.95
PPP1R9A-201ENST00000289495 PPP6R1Q9UPN7 881 aa9□□□□□ -0.97
PPP1R9A-201ENST00000289495 ADRA2BP18089 450 aa8.99□□□□□ -0.97
PPP1R9A-201ENST00000289495 PIAS4Q8N2W9 510 aaPredicted RBP8.72□□□□□ -1.01
PPP1R9A-201ENST00000289495 CCDC180Q9P1Z9 1646 aa8.66□□□□□ -1.02
PPP1R9A-201ENST00000289495 SHROOM4Q9ULL8 1493 aa8.57□□□□□ -1.04
PPP1R9A-201ENST00000289495 ZCCHC6Q5VYS8 1495 aaKnown RBP8.53□□□□□ -1.04
PPP1R9A-201ENST00000289495 DCAF8L2P0C7V8 631 aa8.45□□□□□ -1.06
PPP1R9A-201ENST00000289495 SUPT5HO00267 1087 aaKnown RBP8.39□□□□□ -1.07
PPP1R9A-201ENST00000289495 DCAF1Q9Y4B6 1507 aa8.3□□□□□ -1.08
PPP1R9A-201ENST00000289495 MSH5O43196 834 aa8.22□□□□□ -1.09
PPP1R9A-201ENST00000289495 MAPK8IP2Q13387 824 aaPredicted RBP8.21□□□□□ -1.09
PPP1R9A-201ENST00000289495 PPP4R3CPQ6ZMV5 832 aa8.12□□□□□ -1.11
PPP1R9A-201ENST00000289495 KCNA4P22459 653 aa8.11□□□□□ -1.11
PPP1R9A-201ENST00000289495 SCRIBQ14160 1630 aa8.09□□□□□ -1.11
PPP1R9A-201ENST00000289495 MYO15BQ96JP2 1530 aa8.09□□□□□ -1.11
PPP1R9A-201ENST00000289495 ABCC9O60706 1549 aa8.06□□□□□ -1.12
PPP1R9A-201ENST00000289495 NACADO15069 1562 aa8.02□□□□□ -1.13
PPP1R9A-201ENST00000289495 RSF1Q96T23 1441 aaPredicted RBP7.95□□□□□ -1.14
PPP1R9A-201ENST00000289495 RB1CC1Q8TDY2 1594 aa7.92□□□□□ -1.14
PPP1R9A-201ENST00000289495 TRIM41Q8WV44 630 aa7.85□□□□□ -1.15
PPP1R9A-201ENST00000289495 CECR2Q9BXF3 1484 aa7.84□□□□□ -1.15
PPP1R9A-201ENST00000289495 SCAF1Q9H7N4 1312 aaKnown RBP7.84□□□□□ -1.15
PPP1R9A-201ENST00000289495 NPM3O75607 178 aaKnown RBP7.84□□□□□ -1.16
PPP1R9A-201ENST00000289495 MROH2BQ7Z745 1585 aa7.82□□□□□ -1.16
PPP1R9A-201ENST00000289495 DCAF8L1A6NGE4 600 aa7.82□□□□□ -1.16
PPP1R9A-201ENST00000289495 LOC105371045A0A1W2PR82 267 aa7.81□□□□□ -1.16
PPP1R9A-201ENST00000289495 BAZ1AQ9NRL2 1556 aaPredicted RBP7.8□□□□□ -1.16
PPP1R9A-201ENST00000289495 PCGF6Q9BYE7 350 aa7.8□□□□□ -1.16
PPP1R9A-201ENST00000289495 WIZO95785 1651 aa7.78□□□□□ -1.16
PPP1R9A-201ENST00000289495 FAM9AQ8IZU1 332 aaPredicted RBP7.76□□□□□ -1.17
PPP1R9A-201ENST00000289495 HRCP23327 699 aa7.75□□□□□ -1.17
PPP1R9A-201ENST00000289495 CNKSR2Q8WXI2 1034 aa7.75□□□□□ -1.17
PPP1R9A-201ENST00000289495 DMRT2Q9Y5R5 561 aa7.73□□□□□ -1.17
PPP1R9A-201ENST00000289495 POTEDQ86YR6 584 aa7.72□□□□□ -1.17
PPP1R9A-201ENST00000289495 EHMT2Q96KQ7 1210 aa7.72□□□□□ -1.17
PPP1R9A-201ENST00000289495 SMARCA4P51532 1647 aa7.72□□□□□ -1.17
PPP1R9A-201ENST00000289495 NCBP3Q53F19 620 aaKnown RBP7.71□□□□□ -1.17
PPP1R9A-201ENST00000289495 UNC13AQ9UPW8 1703 aa7.71□□□□□ -1.18
PPP1R9A-201ENST00000289495 TOP2AP11388 1531 aaKnown RBP7.71□□□□□ -1.18
PPP1R9A-201ENST00000289495 TRIM26Q12899 539 aaPredicted RBP7.69□□□□□ -1.18
PPP1R9A-201ENST00000289495 PABPN1Q86U42 306 aaKnown RBP eCLIP7.67□□□□□ -1.18
PPP1R9A-201ENST00000289495 SMARCA2P51531 1590 aa7.63□□□□□ -1.19
PPP1R9A-201ENST00000289495 EIF4G1Q04637 1599 aaKnown RBP7.63□□□□□ -1.19
PPP1R9A-201ENST00000289495 CCDC88BA6NC98 1476 aa7.63□□□□□ -1.19
PPP1R9A-201ENST00000289495 BICRAQ9NZM4 1560 aa7.61□□□□□ -1.19
PPP1R9A-201ENST00000289495 SLC4A1APQ9BWU0 796 aaKnown RBP7.61□□□□□ -1.19
PPP1R9A-201ENST00000289495 ABCC8Q09428 1581 aa7.6□□□□□ -1.19
PPP1R9A-201ENST00000289495 RNF216Q9NWF9 866 aaPredicted RBP7.57□□□□□ -1.2
PPP1R9A-201ENST00000289495 ZEB1P37275 1124 aaPredicted RBP7.56□□□□□ -1.2
PPP1R9A-201ENST00000289495 PEG3Q9GZU2 1588 aa7.55□□□□□ -1.2
PPP1R9A-201ENST00000289495 BAZ1BQ9UIG0 1483 aaKnown RBP7.55□□□□□ -1.2
PPP1R9A-201ENST00000289495 EEA1Q15075 1411 aa7.55□□□□□ -1.2
PPP1R9A-201ENST00000289495 PPARGC1BQ86YN6 1023 aaKnown RBP7.54□□□□□ -1.2
PPP1R9A-201ENST00000289495 HOXD11P31277 338 aaPredicted RBP7.52□□□□□ -1.2
PPP1R9A-201ENST00000289495 ATAD2BQ9ULI0 1458 aa7.52□□□□□ -1.2
PPP1R9A-201ENST00000289495 WRNQ14191 1432 aaPredicted RBP eCLIP7.52□□□□□ -1.21
PPP1R9A-201ENST00000289495 UBTFP17480 764 aaKnown RBP7.51□□□□□ -1.21
PPP1R9A-201ENST00000289495 SOGA1O94964 1423 aa7.5□□□□□ -1.21
PPP1R9A-201ENST00000289495 CSRNP3Q8WYN3 585 aa7.5□□□□□ -1.21
PPP1R9A-201ENST00000289495 ZBTB22O15209 634 aa7.49□□□□□ -1.21
PPP1R9A-201ENST00000289495 CEP162Q5TB80 1403 aa7.48□□□□□ -1.21
PPP1R9A-201ENST00000289495 GOLGA3Q08378 1498 aa7.48□□□□□ -1.21
PPP1R9A-201ENST00000289495 TNIKQ9UKE5 1360 aa7.47□□□□□ -1.21
PPP1R9A-201ENST00000289495 TTBK1Q5TCY1 1321 aaPredicted RBP7.44□□□□□ -1.22
PPP1R9A-201ENST00000289495 CEP164Q9UPV0 1460 aa7.44□□□□□ -1.22
PPP1R9A-201ENST00000289495 SYNJ1O43426 1573 aa7.44□□□□□ -1.22
PPP1R9A-201ENST00000289495 RUSC2Q8N2Y8 1516 aa7.43□□□□□ -1.22
PPP1R9A-201ENST00000289495 SLC4A2P04920 1241 aa7.42□□□□□ -1.22
PPP1R9A-201ENST00000289495 HMGXB3Q12766 1538 aa7.41□□□□□ -1.22
PPP1R9A-201ENST00000289495 CCER1Q8TC90 406 aaPredicted RBP7.41□□□□□ -1.22
PPP1R9A-201ENST00000289495 KIF21BO75037 1637 aa7.4□□□□□ -1.22
PPP1R9A-201ENST00000289495 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.4□□□□□ -1.224e-7■■■□□ 15.3
PPP1R9A-201ENST00000289495 APLP2Q06481 763 aa7.39□□□□□ -1.23
PPP1R9A-201ENST00000289495 NCAPD3P42695 1498 aa7.39□□□□□ -1.23
PPP1R9A-201ENST00000289495 CLIP1P30622 1438 aa7.38□□□□□ -1.23
PPP1R9A-201ENST00000289495 TOP2BQ02880 1626 aa7.38□□□□□ -1.23
PPP1R9A-201ENST00000289495 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.37□□□□□ -1.23
PPP1R9A-201ENST00000289495 BIVM-ERCC5R4GMW8 1640 aa7.35□□□□□ -1.23
PPP1R9A-201ENST00000289495 RANGAP1P46060 587 aaPredicted RBP7.35□□□□□ -1.23
PPP1R9A-201ENST00000289495 RAPGEF2Q9Y4G8 1499 aa7.34□□□□□ -1.24
PPP1R9A-201ENST00000289495 VPS8Q8N3P4 1428 aa7.33□□□□□ -1.24
PPP1R9A-201ENST00000289495 KIF27Q86VH2 1401 aa7.32□□□□□ -1.24
PPP1R9A-201ENST00000289495 CFTRP13569 1480 aa7.31□□□□□ -1.24
PPP1R9A-201ENST00000289495 ERICH3Q5RHP9 1530 aa7.31□□□□□ -1.24
PPP1R9A-201ENST00000289495 CUX1P39880 1505 aa7.3□□□□□ -1.24
PPP1R9A-201ENST00000289495 PRDM2Q13029 1718 aa7.28□□□□□ -1.24
PPP1R9A-201ENST00000289495 HNRNPUL2Q1KMD3 747 aaKnown RBP7.27□□□□□ -1.24
PPP1R9A-201ENST00000289495 PRXQ9BXM0 1461 aa7.27□□□□□ -1.25
PPP1R9A-201ENST00000289495 U3KPZ7 1027 aaPredicted RBP7.26□□□□□ -1.25
PPP1R9A-201ENST00000289495 CADPSQ9ULU8 1353 aa7.26□□□□□ -1.25
PPP1R9A-201ENST00000289495 CUX2O14529 1486 aa7.25□□□□□ -1.25
PPP1R9A-201ENST00000289495 FOXD4L1Q9NU39 408 aa7.25□□□□□ -1.25
PPP1R9A-201ENST00000289495 CC2D2AQ9P2K1 1620 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms