RNA–Protein interactions for RNA: ENST00000286749.3

SLC28A1-201, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,636 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-201ENST00000286749 VAMP4O75379 141 aa16.57■□□□□ 0.24
SLC28A1-201ENST00000286749 NFE2L2Q16236 605 aa16.57■□□□□ 0.24
SLC28A1-201ENST00000286749 TSPYL6Q8N831 410 aa16.57■□□□□ 0.24
SLC28A1-201ENST00000286749 HSP90AB1P08238 724 aaKnown RBP16.57■□□□□ 0.24
SLC28A1-201ENST00000286749 PTCH1Q13635 1447 aa16.57■□□□□ 0.24
SLC28A1-201ENST00000286749 DLG5Q8TDM6 1919 aa16.56■□□□□ 0.24
SLC28A1-201ENST00000286749 ELL2O00472 640 aaPredicted RBP16.56■□□□□ 0.24
SLC28A1-201ENST00000286749 FBXO31Q5XUX0 539 aaPredicted RBP16.56■□□□□ 0.24
SLC28A1-201ENST00000286749 GCC1Q96CN9 775 aa16.56■□□□□ 0.24
SLC28A1-201ENST00000286749 PIK3R4Q99570 1358 aa16.55■□□□□ 0.24
SLC28A1-201ENST00000286749 KIF2CQ99661 725 aa16.55■□□□□ 0.24
SLC28A1-201ENST00000286749 ARHGAP45Q92619 1136 aa16.54■□□□□ 0.24
SLC28A1-201ENST00000286749 TNPO1Q92973 898 aaKnown RBP16.54■□□□□ 0.24
SLC28A1-201ENST00000286749 SIRT2Q8IXJ6 389 aa16.54■□□□□ 0.24
SLC28A1-201ENST00000286749 CHMP4BQ9H444 224 aaKnown RBP16.54■□□□□ 0.24
SLC28A1-201ENST00000286749 EMILIN1Q9Y6C2 1016 aa16.54■□□□□ 0.24
SLC28A1-201ENST00000286749 ATP7BP35670 1465 aa16.53■□□□□ 0.24
SLC28A1-201ENST00000286749 GNAI1P63096 354 aa16.53■□□□□ 0.24
SLC28A1-201ENST00000286749 CALD1Q05682 793 aaKnown RBP16.53■□□□□ 0.24
SLC28A1-201ENST00000286749 TBC1D9Q6ZT07 1266 aa16.53■□□□□ 0.24
SLC28A1-201ENST00000286749 WAPLQ7Z5K2 1190 aa16.53■□□□□ 0.24
SLC28A1-201ENST00000286749 MBIPQ9NS73 344 aa16.53■□□□□ 0.24
SLC28A1-201ENST00000286749 MRE11P49959 708 aa16.53■□□□□ 0.24
SLC28A1-201ENST00000286749 IFT57Q9NWB7 429 aa16.53■□□□□ 0.24
SLC28A1-201ENST00000286749 CD2BP2O95400 341 aaKnown RBP16.52■□□□□ 0.24
SLC28A1-201ENST00000286749 STAG3Q9UJ98 1225 aa16.52■□□□□ 0.24
SLC28A1-201ENST00000286749 ABCC4O15439 1325 aa16.52■□□□□ 0.24
SLC28A1-201ENST00000286749 FOXD4L1Q9NU39 408 aa16.52■□□□□ 0.23
SLC28A1-201ENST00000286749 CIZ1Q9ULV3 898 aaPredicted RBP16.52■□□□□ 0.23
SLC28A1-201ENST00000286749 HSP90AA1P07900 732 aaKnown RBP16.51■□□□□ 0.23
SLC28A1-201ENST00000286749 ZNF853P0CG23 659 aa16.5■□□□□ 0.23
SLC28A1-201ENST00000286749 IL13P35225 146 aa16.5■□□□□ 0.23
SLC28A1-201ENST00000286749 RAB3GAP1Q15042 981 aa16.5■□□□□ 0.23
SLC28A1-201ENST00000286749 TWISTNBQ3B726 338 aaPredicted RBP16.5■□□□□ 0.23
SLC28A1-201ENST00000286749 RBM42Q9BTD8 480 aaKnown RBP16.5■□□□□ 0.23
SLC28A1-201ENST00000286749 GRPEL1Q9HAV7 217 aa16.5■□□□□ 0.23
SLC28A1-201ENST00000286749 KNDC1Q76NI1 1749 aa16.5■□□□□ 0.23
SLC28A1-201ENST00000286749 C8orf58Q8NAV2 365 aa16.49■□□□□ 0.23
SLC28A1-201ENST00000286749 GBP4Q96PP9 640 aa16.49■□□□□ 0.23
SLC28A1-201ENST00000286749 NME9Q86XW9 330 aa16.49■□□□□ 0.23
SLC28A1-201ENST00000286749 ZRANB1Q9UGI0 708 aa16.49■□□□□ 0.23
SLC28A1-201ENST00000286749 DLC1Q96QB1 1528 aa16.49■□□□□ 0.23
SLC28A1-201ENST00000286749 CDK12Q9NYV4 1490 aaPredicted RBP16.48■□□□□ 0.23
SLC28A1-201ENST00000286749 K7ELQ4 463 aaPredicted RBP16.48■□□□□ 0.23
SLC28A1-201ENST00000286749 SETD1AO15047 1707 aaKnown RBP16.48■□□□□ 0.23
SLC28A1-201ENST00000286749 REREQ9P2R6 1566 aa16.48■□□□□ 0.23
SLC28A1-201ENST00000286749 AK9Q5TCS8 1911 aa16.47■□□□□ 0.23
SLC28A1-201ENST00000286749 FAM83GA6ND36 823 aa16.47■□□□□ 0.23
SLC28A1-201ENST00000286749 CFAP44Q96MT7 982 aa16.47■□□□□ 0.23
SLC28A1-201ENST00000286749 EDC4Q6P2E9 1401 aaKnown RBP16.47■□□□□ 0.23
SLC28A1-201ENST00000286749 CDC45O75419 566 aa16.47■□□□□ 0.23
SLC28A1-201ENST00000286749 FAM69CQ0P6D2 419 aa16.47■□□□□ 0.23
SLC28A1-201ENST00000286749 API5Q9BZZ5 524 aaKnown RBP16.47■□□□□ 0.23
SLC28A1-201ENST00000286749 RIMS2Q9UQ26 1411 aa16.46■□□□□ 0.23
SLC28A1-201ENST00000286749 GSPT1P15170 499 aaKnown RBP16.46■□□□□ 0.22
SLC28A1-201ENST00000286749 GAS2L2Q8NHY3 880 aa16.46■□□□□ 0.22
SLC28A1-201ENST00000286749 ISY1Q9ULR0 285 aaKnown RBP16.46■□□□□ 0.22
SLC28A1-201ENST00000286749 CPSF1Q10570 1443 aaKnown RBP16.45■□□□□ 0.22
SLC28A1-201ENST00000286749 LMOD3Q0VAK6 560 aa16.45■□□□□ 0.22
SLC28A1-201ENST00000286749 DCTN1Q14203 1278 aa16.45■□□□□ 0.22
SLC28A1-201ENST00000286749 DIP2BQ9P265 1576 aa16.45■□□□□ 0.22
SLC28A1-201ENST00000286749 RRS1Q15050 365 aaKnown RBP16.45■□□□□ 0.22
SLC28A1-201ENST00000286749 GAS2L3Q86XJ1 694 aa16.45■□□□□ 0.22
SLC28A1-201ENST00000286749 CLCN1P35523 988 aa16.44■□□□□ 0.22
SLC28A1-201ENST00000286749 SSFA2P28290 1259 aa16.44■□□□□ 0.22
SLC28A1-201ENST00000286749 PLEKHM2Q8IWE5 1019 aa16.44■□□□□ 0.22
SLC28A1-201ENST00000286749 SKOR2Q2VWA4 1001 aaPredicted RBP16.43■□□□□ 0.22
SLC28A1-201ENST00000286749 A2ML1A8K2U0 1454 aa16.43■□□□□ 0.22
SLC28A1-201ENST00000286749 TRHP20396 242 aaPredicted RBP16.43■□□□□ 0.22
SLC28A1-201ENST00000286749 CPS1P31327 1500 aa16.43■□□□□ 0.22
SLC28A1-201ENST00000286749 AATKQ6ZMQ8 1374 aa16.43■□□□□ 0.22
SLC28A1-201ENST00000286749 MON2Q7Z3U7 1717 aa16.42■□□□□ 0.22
SLC28A1-201ENST00000286749 WASLO00401 505 aaPredicted RBP16.42■□□□□ 0.22
SLC28A1-201ENST00000286749 PTMSP20962 102 aa16.42■□□□□ 0.22
SLC28A1-201ENST00000286749 COG3Q96JB2 828 aa16.42■□□□□ 0.22
SLC28A1-201ENST00000286749 DCTPP1Q9H773 170 aa16.42■□□□□ 0.22
SLC28A1-201ENST00000286749 NCKAP5LQ9HCH0 1330 aa16.41■□□□□ 0.22
SLC28A1-201ENST00000286749 KIF13AQ9H1H9 1805 aa16.41■□□□□ 0.22
SLC28A1-201ENST00000286749 TTC22Q5TAA0 569 aa16.41■□□□□ 0.22
SLC28A1-201ENST00000286749 C16orf71Q8IYS4 520 aaPredicted RBP16.41■□□□□ 0.22
SLC28A1-201ENST00000286749 KIF24Q5T7B8 1368 aa16.4■□□□□ 0.22
SLC28A1-201ENST00000286749 NAP1L5Q96NT1 182 aaPredicted RBP16.4■□□□□ 0.22
SLC28A1-201ENST00000286749 ITSN1Q15811 1721 aa16.4■□□□□ 0.22
SLC28A1-201ENST00000286749 NUDT16Q96DE0 195 aaKnown RBP16.39■□□□□ 0.21
SLC28A1-201ENST00000286749 NRXN3Q9Y4C0 1643 aa16.39■□□□□ 0.21
SLC28A1-201ENST00000286749 ATP10DQ9P241 1426 aa16.39■□□□□ 0.21
SLC28A1-201ENST00000286749 KRT24Q2M2I5 525 aa16.39■□□□□ 0.21
SLC28A1-201ENST00000286749 INTS3Q68E01 1043 aaKnown RBP16.39■□□□□ 0.21
SLC28A1-201ENST00000286749 AKAP12Q02952 1782 aa16.39■□□□□ 0.21
SLC28A1-201ENST00000286749 ERBB4Q15303 1308 aa16.39■□□□□ 0.21
SLC28A1-201ENST00000286749 C3P01024 1663 aa16.39■□□□□ 0.21
SLC28A1-201ENST00000286749 OTUD7AQ8TE49 926 aaPredicted RBP16.38■□□□□ 0.21
SLC28A1-201ENST00000286749 ESPNB1AK53 854 aa16.38■□□□□ 0.21
SLC28A1-201ENST00000286749 RABEP1Q15276 862 aa16.38■□□□□ 0.21
SLC28A1-201ENST00000286749 TXNDC2Q86VQ3 553 aa16.38■□□□□ 0.21
SLC28A1-201ENST00000286749 AEBP1Q8IUX7 1158 aa16.38■□□□□ 0.21
SLC28A1-201ENST00000286749 ANKRD44Q8N8A2 993 aa16.38■□□□□ 0.21
SLC28A1-201ENST00000286749 RGS12O14924 1447 aa16.38■□□□□ 0.21
SLC28A1-201ENST00000286749 GOLGA6L22H0YM25 854 aa16.37■□□□□ 0.21
SLC28A1-201ENST00000286749 BAG4O95429 457 aaKnown RBP16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms