RNA–Protein interactions for RNA: ENST00000215917.11

SRRD-201, Transcript of SRR1 domain containing, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRRD, Length 4,020 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRD-201ENST00000215917 BCL11BQ9C0K0 894 aaPredicted RBP18.76■□□□□ 0.59
SRRD-201ENST00000215917 DZIP1LQ8IYY4 767 aaKnown RBP18.76■□□□□ 0.59
SRRD-201ENST00000215917 SHPRHQ149N8 1683 aa18.75■□□□□ 0.59
SRRD-201ENST00000215917 RBM10P98175 930 aaKnown RBP18.75■□□□□ 0.59
SRRD-201ENST00000215917 SSH1Q8WYL5 1049 aa18.75■□□□□ 0.59
SRRD-201ENST00000215917 PDZRN3Q9UPQ7 1066 aa18.74■□□□□ 0.59
SRRD-201ENST00000215917 MPNDQ8N594 471 aa18.74■□□□□ 0.59
SRRD-201ENST00000215917 PLEKHF1Q96S99 279 aa18.74■□□□□ 0.59
SRRD-201ENST00000215917 SEC24BO95487 1268 aa18.73■□□□□ 0.59
SRRD-201ENST00000215917 NOB1Q9ULX3 412 aaKnown RBP18.72■□□□□ 0.59
SRRD-201ENST00000215917 NLRP1Q9C000 1473 aa18.72■□□□□ 0.59
SRRD-201ENST00000215917 PHACTR3Q96KR7 559 aa18.72■□□□□ 0.59
SRRD-201ENST00000215917 RWDD1Q9H446 243 aaPredicted RBP18.72■□□□□ 0.59
SRRD-201ENST00000215917 TRIM35Q9UPQ4 493 aa18.72■□□□□ 0.59
SRRD-201ENST00000215917 ACEP12821 1306 aa18.72■□□□□ 0.59
SRRD-201ENST00000215917 NRXN3Q9Y4C0 1643 aa18.72■□□□□ 0.59
SRRD-201ENST00000215917 ADAMTS13Q76LX8 1427 aa18.71■□□□□ 0.59
SRRD-201ENST00000215917 THEMISQ8N1K5 641 aaPredicted RBP18.71■□□□□ 0.59
SRRD-201ENST00000215917 NUTM2GQ5VZR2 741 aa18.71■□□□□ 0.58
SRRD-201ENST00000215917 USP32Q8NFA0 1604 aa18.7■□□□□ 0.58
SRRD-201ENST00000215917 PHF23Q9BUL5 403 aaPredicted RBP18.69■□□□□ 0.58
SRRD-201ENST00000215917 TRIM27P14373 513 aa18.69■□□□□ 0.58
SRRD-201ENST00000215917 NGDNQ8NEJ9 315 aaKnown RBP18.69■□□□□ 0.58
SRRD-201ENST00000215917 MVPQ14764 893 aaKnown RBP18.69■□□□□ 0.58
SRRD-201ENST00000215917 DLC1Q96QB1 1528 aa18.68■□□□□ 0.58
SRRD-201ENST00000215917 IQSEC2Q5JU85 1478 aa18.68■□□□□ 0.58
SRRD-201ENST00000215917 DCTN1Q14203 1278 aa18.68■□□□□ 0.58
SRRD-201ENST00000215917 C14orf37Q86TY3 774 aa18.67■□□□□ 0.58
SRRD-201ENST00000215917 CCDC27Q2M243 656 aa18.67■□□□□ 0.58
SRRD-201ENST00000215917 C1orf115Q9H7X2 142 aa18.67■□□□□ 0.58
SRRD-201ENST00000215917 TMEM57Q8N5G2 664 aa18.66■□□□□ 0.58
SRRD-201ENST00000215917 PLEKHG1Q9ULL1 1385 aa18.66■□□□□ 0.58
SRRD-201ENST00000215917 PTPRUQ92729 1446 aa18.66■□□□□ 0.58
SRRD-201ENST00000215917 EDC4Q6P2E9 1401 aaKnown RBP18.66■□□□□ 0.58
SRRD-201ENST00000215917 KCNA6P17658 529 aa18.66■□□□□ 0.58
SRRD-201ENST00000215917 CPS1P31327 1500 aa18.66■□□□□ 0.58
SRRD-201ENST00000215917 ATP7BP35670 1465 aa18.66■□□□□ 0.58
SRRD-201ENST00000215917 FCHSD2O94868 740 aa18.65■□□□□ 0.58
SRRD-201ENST00000215917 SETD1AO15047 1707 aaKnown RBP18.65■□□□□ 0.58
SRRD-201ENST00000215917 UBR1Q8IWV7 1749 aa18.65■□□□□ 0.58
SRRD-201ENST00000215917 ZNF692Q9BU19 519 aaPredicted RBP18.65■□□□□ 0.58
SRRD-201ENST00000215917 CPSF1Q10570 1443 aaKnown RBP18.65■□□□□ 0.58
SRRD-201ENST00000215917 TTC21BQ7Z4L5 1316 aa18.65■□□□□ 0.58
SRRD-201ENST00000215917 FAM83GA6ND36 823 aa18.65■□□□□ 0.58
SRRD-201ENST00000215917 ATF7IPQ6VMQ6 1270 aa18.64■□□□□ 0.57
SRRD-201ENST00000215917 AEBP1Q8IUX7 1158 aa18.64■□□□□ 0.57
SRRD-201ENST00000215917 DDX49Q9Y6V7 483 aaKnown RBP18.64■□□□□ 0.57
SRRD-201ENST00000215917 FAM135BQ49AJ0 1406 aa18.64■□□□□ 0.57
SRRD-201ENST00000215917 COL3A1P02461 1466 aaPredicted RBP18.64■□□□□ 0.57
SRRD-201ENST00000215917 IL13P35225 146 aa18.63■□□□□ 0.57
SRRD-201ENST00000215917 HSP90AB2PQ58FF8 381 aa18.62■□□□□ 0.57
SRRD-201ENST00000215917 GBP4Q96PP9 640 aa18.62■□□□□ 0.57
SRRD-201ENST00000215917 LNPKQ9C0E8 428 aa18.62■□□□□ 0.57
SRRD-201ENST00000215917 SIRT1Q96EB6 747 aa18.62■□□□□ 0.57
SRRD-201ENST00000215917 PNPLA6Q8IY17 1366 aa18.61■□□□□ 0.57
SRRD-201ENST00000215917 SULT6B1Q6IMI4 303 aa18.61■□□□□ 0.57
SRRD-201ENST00000215917 IPO8O15397 1037 aaKnown RBP18.61■□□□□ 0.57
SRRD-201ENST00000215917 TSPYL6Q8N831 410 aa18.61■□□□□ 0.57
SRRD-201ENST00000215917 TBX22Q9Y458 520 aa18.61■□□□□ 0.57
SRRD-201ENST00000215917 DDX19BQ9UMR2 479 aa18.6■□□□□ 0.57
SRRD-201ENST00000215917 MED14O60244 1454 aa18.6■□□□□ 0.57
SRRD-201ENST00000215917 TECPR2O15040 1411 aa18.6■□□□□ 0.57
SRRD-201ENST00000215917 NFE2L2Q16236 605 aa18.59■□□□□ 0.57
SRRD-201ENST00000215917 TRAK2O60296 914 aa18.58■□□□□ 0.57
SRRD-201ENST00000215917 FAM43AQ8N2R8 423 aa18.58■□□□□ 0.57
SRRD-201ENST00000215917 R3HCC1Q9Y3T6 440 aaKnown RBP18.58■□□□□ 0.57
SRRD-201ENST00000215917 EIF4A2Q14240 407 aaKnown RBP18.58■□□□□ 0.56
SRRD-201ENST00000215917 LTV1Q96GA3 475 aaPredicted RBP18.57■□□□□ 0.56
SRRD-201ENST00000215917 PANK2Q9BZ23 570 aa18.57■□□□□ 0.56
SRRD-201ENST00000215917 CALD1Q05682 793 aaKnown RBP18.57■□□□□ 0.56
SRRD-201ENST00000215917 RNF214Q8ND24 703 aa18.57■□□□□ 0.56
SRRD-201ENST00000215917 C3P01024 1663 aa18.56■□□□□ 0.56
SRRD-201ENST00000215917 NLRP6P59044 892 aa18.56■□□□□ 0.56
SRRD-201ENST00000215917 UBE2Q2Q8WVN8 375 aa18.56■□□□□ 0.56
SRRD-201ENST00000215917 ZMYND15Q9H091 742 aa18.56■□□□□ 0.56
SRRD-201ENST00000215917 MAP2P11137 1827 aaKnown RBP18.56■□□□□ 0.56
SRRD-201ENST00000215917 KIF20BQ96Q89 1820 aa18.56■□□□□ 0.56
SRRD-201ENST00000215917 PLEKHG3A1L390 1219 aa18.55■□□□□ 0.56
SRRD-201ENST00000215917 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.55■□□□□ 0.56
SRRD-201ENST00000215917 LRRC7Q96NW7 1537 aa18.55■□□□□ 0.56
SRRD-201ENST00000215917 ANKRD45Q5TZF3 282 aa18.55■□□□□ 0.56
SRRD-201ENST00000215917 AMPHP49418 695 aa18.54■□□□□ 0.56
SRRD-201ENST00000215917 KRT24Q2M2I5 525 aa18.54■□□□□ 0.56
SRRD-201ENST00000215917 CDC42BPGQ6DT37 1551 aa18.54■□□□□ 0.56
SRRD-201ENST00000215917 KIF16BQ96L93 1317 aa18.54■□□□□ 0.56
SRRD-201ENST00000215917 ANKLE2Q86XL3 938 aa18.54■□□□□ 0.56
SRRD-201ENST00000215917 MCM10Q7L590 875 aa18.53■□□□□ 0.56
SRRD-201ENST00000215917 MIS18AQ9NYP9 233 aa18.53■□□□□ 0.56
SRRD-201ENST00000215917 FER1L4A9Z1Z3 1794 aa18.53■□□□□ 0.56
SRRD-201ENST00000215917 TWISTNBQ3B726 338 aaPredicted RBP18.53■□□□□ 0.56
SRRD-201ENST00000215917 MBIPQ9NS73 344 aa18.52■□□□□ 0.56
SRRD-201ENST00000215917 CDK11BP21127 795 aaKnown RBP18.52■□□□□ 0.56
SRRD-201ENST00000215917 XPCQ01831 940 aaPredicted RBP18.52■□□□□ 0.55
SRRD-201ENST00000215917 USP6P35125 1406 aa18.51■□□□□ 0.55
SRRD-201ENST00000215917 ABTB2Q8N961 1025 aa18.51■□□□□ 0.55
SRRD-201ENST00000215917 LMOD2Q6P5Q4 547 aa18.51■□□□□ 0.55
SRRD-201ENST00000215917 C8orf58Q8NAV2 365 aa18.51■□□□□ 0.55
SRRD-201ENST00000215917 C22orf23Q9BZE7 217 aa18.51■□□□□ 0.55
SRRD-201ENST00000215917 MAP3K19Q56UN5 1328 aa18.51■□□□□ 0.55
SRRD-201ENST00000215917 ANKRD26Q9UPS8 1709 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms