RNA–Protein interactions for RNA: ENST00000199448.8

EPDR1-201, Transcript of ependymin related 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene EPDR1, Length 2,599 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPDR1-201ENST00000199448 ARHGEF40Q8TER5 1519 aa25.69■■□□□ 1.7
EPDR1-201ENST00000199448 PNNQ9H307 717 aaKnown RBP25.68■■□□□ 1.7
EPDR1-201ENST00000199448 RRS1Q15050 365 aaKnown RBP25.68■■□□□ 1.7
EPDR1-201ENST00000199448 STAG3Q9UJ98 1225 aa25.67■■□□□ 1.7
EPDR1-201ENST00000199448 ARHGAP31Q2M1Z3 1444 aa25.66■■□□□ 1.7
EPDR1-201ENST00000199448 GRPEL1Q9HAV7 217 aa25.66■■□□□ 1.7
EPDR1-201ENST00000199448 DDX11L8A8MPP1 907 aa25.66■■□□□ 1.7
EPDR1-201ENST00000199448 TWISTNBQ3B726 338 aaPredicted RBP25.66■■□□□ 1.7
EPDR1-201ENST00000199448 C16orf71Q8IYS4 520 aaPredicted RBP25.66■■□□□ 1.7
EPDR1-201ENST00000199448 KRT24Q2M2I5 525 aa25.65■■□□□ 1.7
EPDR1-201ENST00000199448 TMEM131LA2VDJ0 1609 aa25.65■■□□□ 1.7
EPDR1-201ENST00000199448 HSP90AA1P07900 732 aaKnown RBP25.65■■□□□ 1.7
EPDR1-201ENST00000199448 GSPT1P15170 499 aaKnown RBP25.65■■□□□ 1.7
EPDR1-201ENST00000199448 IL13P35225 146 aa25.65■■□□□ 1.7
EPDR1-201ENST00000199448 BRPF1P55201 1214 aaPredicted RBP25.65■■□□□ 1.7
EPDR1-201ENST00000199448 GAS2L2Q8NHY3 880 aa25.65■■□□□ 1.7
EPDR1-201ENST00000199448 ANKRD26Q9UPS8 1709 aa25.64■■□□□ 1.7
EPDR1-201ENST00000199448 GCC1Q96CN9 775 aa25.64■■□□□ 1.7
EPDR1-201ENST00000199448 RAB3GAP1Q15042 981 aa25.63■■□□□ 1.69
EPDR1-201ENST00000199448 ZNF853P0CG23 659 aa25.63■■□□□ 1.69
EPDR1-201ENST00000199448 MRE11P49959 708 aa25.63■■□□□ 1.69
EPDR1-201ENST00000199448 ABCC4O15439 1325 aa25.62■■□□□ 1.69
EPDR1-201ENST00000199448 SSFA2P28290 1259 aa25.62■■□□□ 1.69
EPDR1-201ENST00000199448 ALKQ9UM73 1620 aa25.62■■□□□ 1.69
EPDR1-201ENST00000199448 CFAP74Q9C0B2 1584 aa25.62■■□□□ 1.69
EPDR1-201ENST00000199448 OTUD7AQ8TE49 926 aaPredicted RBP25.62■■□□□ 1.69
EPDR1-201ENST00000199448 GNAI1P63096 354 aa25.61■■□□□ 1.69
EPDR1-201ENST00000199448 IFT57Q9NWB7 429 aa25.61■■□□□ 1.69
EPDR1-201ENST00000199448 PTCH1Q13635 1447 aa25.61■■□□□ 1.69
EPDR1-201ENST00000199448 ERBB4Q15303 1308 aa25.61■■□□□ 1.69
EPDR1-201ENST00000199448 PIK3R4Q99570 1358 aa25.6■■□□□ 1.69
EPDR1-201ENST00000199448 K7ELQ4 463 aaPredicted RBP25.59■■□□□ 1.69
EPDR1-201ENST00000199448 APBB1O00213 710 aa25.59■■□□□ 1.69
EPDR1-201ENST00000199448 ARHGAP45Q92619 1136 aa25.59■■□□□ 1.69
EPDR1-201ENST00000199448 CLTCQ00610 1675 aaKnown RBP25.58■■□□□ 1.69
EPDR1-201ENST00000199448 PLEKHM2Q8IWE5 1019 aa25.57■■□□□ 1.68
EPDR1-201ENST00000199448 ZNF428Q96B54 188 aa25.57■■□□□ 1.68
EPDR1-201ENST00000199448 AEBP1Q8IUX7 1158 aa25.57■■□□□ 1.68
EPDR1-201ENST00000199448 CDC42BPGQ6DT37 1551 aa25.57■■□□□ 1.68
EPDR1-201ENST00000199448 PREX1Q8TCU6 1659 aa25.56■■□□□ 1.68
EPDR1-201ENST00000199448 KIF20BQ96Q89 1820 aa25.56■■□□□ 1.68
EPDR1-201ENST00000199448 CFAP44Q96MT7 982 aa25.56■■□□□ 1.68
EPDR1-201ENST00000199448 MAP2P11137 1827 aaKnown RBP25.56■■□□□ 1.68
EPDR1-201ENST00000199448 OSCARQ8IYS5 282 aa25.55■■□□□ 1.68
EPDR1-201ENST00000199448 SMARCA5O60264 1052 aaPredicted RBP25.54■■□□□ 1.68
EPDR1-201ENST00000199448 GBP4Q96PP9 640 aa25.54■■□□□ 1.68
EPDR1-201ENST00000199448 NEO1Q92859 1461 aa25.54■■□□□ 1.68
EPDR1-201ENST00000199448 TXNDC2Q86VQ3 553 aa25.54■■□□□ 1.68
EPDR1-201ENST00000199448 NAP1L5Q96NT1 182 aaPredicted RBP25.54■■□□□ 1.68
EPDR1-201ENST00000199448 CIZ1Q9ULV3 898 aaPredicted RBP25.54■■□□□ 1.68
EPDR1-201ENST00000199448 CDC45O75419 566 aa25.53■■□□□ 1.68
EPDR1-201ENST00000199448 CLCN1P35523 988 aa25.53■■□□□ 1.68
EPDR1-201ENST00000199448 PKP1Q13835 747 aa25.51■■□□□ 1.68
EPDR1-201ENST00000199448 CALD1Q05682 793 aaKnown RBP25.51■■□□□ 1.67
EPDR1-201ENST00000199448 KNDC1Q76NI1 1749 aa25.51■■□□□ 1.67
EPDR1-201ENST00000199448 RIMS2Q9UQ26 1411 aa25.5■■□□□ 1.67
EPDR1-201ENST00000199448 MLECQ14165 292 aa25.5■■□□□ 1.67
EPDR1-201ENST00000199448 MCM10Q7L590 875 aa25.5■■□□□ 1.67
EPDR1-201ENST00000199448 DCTPP1Q9H773 170 aa25.5■■□□□ 1.67
EPDR1-201ENST00000199448 WASLO00401 505 aaPredicted RBP25.49■■□□□ 1.67
EPDR1-201ENST00000199448 API5Q9BZZ5 524 aaKnown RBP25.49■■□□□ 1.67
EPDR1-201ENST00000199448 CHAMP1Q96JM3 812 aa25.48■■□□□ 1.67
EPDR1-201ENST00000199448 CPS1P31327 1500 aa25.48■■□□□ 1.67
EPDR1-201ENST00000199448 RICTORQ6R327 1708 aa25.48■■□□□ 1.67
EPDR1-201ENST00000199448 TTC22Q5TAA0 569 aa25.48■■□□□ 1.67
EPDR1-201ENST00000199448 NUDT16Q96DE0 195 aaKnown RBP25.47■■□□□ 1.67
EPDR1-201ENST00000199448 COG3Q96JB2 828 aa25.47■■□□□ 1.67
EPDR1-201ENST00000199448 AK9Q5TCS8 1911 aa25.47■■□□□ 1.67
EPDR1-201ENST00000199448 ESPNB1AK53 854 aa25.47■■□□□ 1.67
EPDR1-201ENST00000199448 CHMP4BQ9H444 224 aaKnown RBP25.47■■□□□ 1.67
EPDR1-201ENST00000199448 MIS18AQ9NYP9 233 aa25.47■■□□□ 1.67
EPDR1-201ENST00000199448 ATP7BP35670 1465 aa25.46■■□□□ 1.67
EPDR1-201ENST00000199448 CPSF1Q10570 1443 aaKnown RBP25.46■■□□□ 1.67
EPDR1-201ENST00000199448 BAG4O95429 457 aaKnown RBP25.46■■□□□ 1.67
EPDR1-201ENST00000199448 SULT6B1Q6IMI4 303 aa25.46■■□□□ 1.67
EPDR1-201ENST00000199448 NUTM2FA1L443 756 aa25.45■■□□□ 1.66
EPDR1-201ENST00000199448 MEIS3Q99687 375 aa25.45■■□□□ 1.66
EPDR1-201ENST00000199448 USP26Q9BXU7 913 aa25.45■■□□□ 1.66
EPDR1-201ENST00000199448 METP08581 1390 aa25.45■■□□□ 1.66
EPDR1-201ENST00000199448 SOX12O15370 315 aa25.45■■□□□ 1.66
EPDR1-201ENST00000199448 SDSP20132 328 aa25.44■■□□□ 1.66
EPDR1-201ENST00000199448 EDC4Q6P2E9 1401 aaKnown RBP25.43■■□□□ 1.66
EPDR1-201ENST00000199448 DDX49Q9Y6V7 483 aaKnown RBP25.43■■□□□ 1.66
EPDR1-201ENST00000199448 DLG5Q8TDM6 1919 aa25.43■■□□□ 1.66
EPDR1-201ENST00000199448 CEP85Q6P2H3 762 aa25.43■■□□□ 1.66
EPDR1-201ENST00000199448 ATP10DQ9P241 1426 aa25.43■■□□□ 1.66
EPDR1-201ENST00000199448 MCTP1Q6DN14 999 aa25.42■■□□□ 1.66
EPDR1-201ENST00000199448 ZGPATQ8N5A5 531 aaKnown RBP25.42■■□□□ 1.66
EPDR1-201ENST00000199448 CDK12Q9NYV4 1490 aaPredicted RBP25.42■■□□□ 1.66
EPDR1-201ENST00000199448 RGS12O14924 1447 aa25.42■■□□□ 1.66
EPDR1-201ENST00000199448 INTS3Q68E01 1043 aaKnown RBP25.42■■□□□ 1.66
EPDR1-201ENST00000199448 ANKRD44Q8N8A2 993 aa25.42■■□□□ 1.66
EPDR1-201ENST00000199448 EIF4A2Q14240 407 aaKnown RBP25.41■■□□□ 1.66
EPDR1-201ENST00000199448 MSH6P52701 1360 aa25.41■■□□□ 1.66
EPDR1-201ENST00000199448 SKOR2Q2VWA4 1001 aaPredicted RBP25.41■■□□□ 1.66
EPDR1-201ENST00000199448 A2ML1A8K2U0 1454 aa25.4■■□□□ 1.66
EPDR1-201ENST00000199448 LMOD3Q0VAK6 560 aa25.4■■□□□ 1.66
EPDR1-201ENST00000199448 TSHZ3Q63HK5 1081 aa25.39■■□□□ 1.66
EPDR1-201ENST00000199448 NCLP19338 710 aaKnown RBP25.39■■□□□ 1.65
EPDR1-201ENST00000199448 TRIM44Q96DX7 344 aaPredicted RBP25.39■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms