RNA–Protein interactions for RNA: ENST00000198939.6

CHERP-201, Transcript of calcium homeostasis endoplasmic reticulum protein, humanhuman

TSL 5 BASIC

Gene CHERP, Length 4,084 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHERP-201ENST00000198939 FSD2A1L4K1 749 aa12.92□□□□□ -0.34
CHERP-201ENST00000198939 NCLP19338 710 aaKnown RBP12.92□□□□□ -0.34
CHERP-201ENST00000198939 NALCNQ8IZF0 1738 aa12.91□□□□□ -0.34
CHERP-201ENST00000198939 NPHP3Q7Z494 1330 aa12.91□□□□□ -0.34
CHERP-201ENST00000198939 FMN2Q9NZ56 1722 aa12.91□□□□□ -0.34
CHERP-201ENST00000198939 ATP7BP35670 1465 aa12.91□□□□□ -0.34
CHERP-201ENST00000198939 MST1RQ04912 1400 aa12.91□□□□□ -0.34
CHERP-201ENST00000198939 ANKRD36BQ8N2N9 1353 aa12.91□□□□□ -0.34
CHERP-201ENST00000198939 SLC12A5Q9H2X9 1139 aa12.91□□□□□ -0.34
CHERP-201ENST00000198939 DDX11L8A8MPP1 907 aa12.9□□□□□ -0.34
CHERP-201ENST00000198939 IGHDP01880 384 aa12.9□□□□□ -0.34
CHERP-201ENST00000198939 MSNP26038 577 aaKnown RBP12.9□□□□□ -0.34
CHERP-201ENST00000198939 USP19O94966 1318 aa12.9□□□□□ -0.34
CHERP-201ENST00000198939 PRR36Q9H6K5 1346 aa12.9□□□□□ -0.35
CHERP-201ENST00000198939 ITSN1Q15811 1721 aa12.89□□□□□ -0.35
CHERP-201ENST00000198939 ACEP12821 1306 aa12.89□□□□□ -0.35
CHERP-201ENST00000198939 ANTXR1Q9H6X2 564 aa12.89□□□□□ -0.35
CHERP-201ENST00000198939 CGNL1Q0VF96 1302 aa12.89□□□□□ -0.35
CHERP-201ENST00000198939 BCAR3O75815 825 aa12.89□□□□□ -0.35
CHERP-201ENST00000198939 KIAA1211Q6ZU35 1233 aa12.89□□□□□ -0.35
CHERP-201ENST00000198939 PMFBP1Q8TBY8 1022 aa12.89□□□□□ -0.35
CHERP-201ENST00000198939 COG6Q9Y2V7 657 aa12.88□□□□□ -0.35
CHERP-201ENST00000198939 POLR3AO14802 1390 aaPredicted RBP12.88□□□□□ -0.35
CHERP-201ENST00000198939 HSCBQ8IWL3 235 aa12.88□□□□□ -0.35
CHERP-201ENST00000198939 FAM13BQ9NYF5 915 aa12.88□□□□□ -0.35
CHERP-201ENST00000198939 TTC21AQ8NDW8 1320 aa12.88□□□□□ -0.35
CHERP-201ENST00000198939 CLUAP1Q96AJ1 413 aa12.88□□□□□ -0.35
CHERP-201ENST00000198939 ORAI2Q96SN7 254 aa12.87□□□□□ -0.35
CHERP-201ENST00000198939 ISY1Q9ULR0 285 aaKnown RBP12.87□□□□□ -0.35
CHERP-201ENST00000198939 KIF1AQ12756 1690 aa12.87□□□□□ -0.35
CHERP-201ENST00000198939 CCDC146Q8IYE0 955 aa12.87□□□□□ -0.35
CHERP-201ENST00000198939 BRINP3Q76B58 766 aa12.87□□□□□ -0.35
CHERP-201ENST00000198939 PER1O15534 1290 aaPredicted RBP12.86□□□□□ -0.35
CHERP-201ENST00000198939 KRT28Q7Z3Y7 464 aa12.86□□□□□ -0.35
CHERP-201ENST00000198939 RBM10P98175 930 aaKnown RBP12.86□□□□□ -0.35
CHERP-201ENST00000198939 TBC1D32Q96NH3 1257 aa12.86□□□□□ -0.35
CHERP-201ENST00000198939 BLMP54132 1417 aaPredicted RBP12.86□□□□□ -0.35
CHERP-201ENST00000198939 FOXO3O43524 673 aa12.85□□□□□ -0.35
CHERP-201ENST00000198939 MFAP1P55081 439 aaKnown RBP12.85□□□□□ -0.35
CHERP-201ENST00000198939 PIP4K2BP78356 416 aa12.85□□□□□ -0.35
CHERP-201ENST00000198939 SLFN5Q08AF3 891 aa12.85□□□□□ -0.35
CHERP-201ENST00000198939 EDC4Q6P2E9 1401 aaKnown RBP12.85□□□□□ -0.35
CHERP-201ENST00000198939 XIRP1Q702N8 1843 aaKnown RBP12.85□□□□□ -0.35
CHERP-201ENST00000198939 PTMAP06454 111 aaKnown RBP12.85□□□□□ -0.35
CHERP-201ENST00000198939 CPSF1Q10570 1443 aaKnown RBP12.84□□□□□ -0.35
CHERP-201ENST00000198939 NSD2O96028 1365 aa12.84□□□□□ -0.35
CHERP-201ENST00000198939 PANK1Q8TE04 598 aa12.84□□□□□ -0.35
CHERP-201ENST00000198939 A0A1W2PP64 1363 aa12.84□□□□□ -0.35
CHERP-201ENST00000198939 LRRC59Q96AG4 307 aaKnown RBP12.83□□□□□ -0.35
CHERP-201ENST00000198939 GBP4Q96PP9 640 aa12.83□□□□□ -0.35
CHERP-201ENST00000198939 SBNO1A3KN83 1393 aa12.83□□□□□ -0.36
CHERP-201ENST00000198939 APAF1O14727 1248 aa12.83□□□□□ -0.36
CHERP-201ENST00000198939 CALD1Q05682 793 aaKnown RBP12.83□□□□□ -0.36
CHERP-201ENST00000198939 C22orf23Q9BZE7 217 aa12.83□□□□□ -0.36
CHERP-201ENST00000198939 USP6P35125 1406 aa12.82□□□□□ -0.36
CHERP-201ENST00000198939 INSRP06213 1382 aa12.82□□□□□ -0.36
CHERP-201ENST00000198939 ERBB4Q15303 1308 aa12.82□□□□□ -0.36
CHERP-201ENST00000198939 TTC21BQ7Z4L5 1316 aa12.82□□□□□ -0.36
CHERP-201ENST00000198939 E9PSI1 815 aa12.82□□□□□ -0.36
CHERP-201ENST00000198939 PDE3AQ14432 1141 aa12.82□□□□□ -0.36
CHERP-201ENST00000198939 TOPAZ1Q8N9V7 1692 aa12.82□□□□□ -0.36
CHERP-201ENST00000198939 NPC1L1Q9UHC9 1359 aa12.82□□□□□ -0.36
CHERP-201ENST00000198939 NSD3Q9BZ95 1437 aa12.82□□□□□ -0.36
CHERP-201ENST00000198939 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.82□□□□□ -0.36
CHERP-201ENST00000198939 COG3Q96JB2 828 aa12.82□□□□□ -0.36
CHERP-201ENST00000198939 ARHGEF10O15013 1369 aa12.82□□□□□ -0.36
CHERP-201ENST00000198939 USP32Q8NFA0 1604 aa12.81□□□□□ -0.36
CHERP-201ENST00000198939 GOLGA6L22H0YM25 854 aa12.81□□□□□ -0.36
CHERP-201ENST00000198939 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.81□□□□□ -0.36
CHERP-201ENST00000198939 ABTB2Q8N961 1025 aa12.81□□□□□ -0.36
CHERP-201ENST00000198939 RWDD1Q9H446 243 aaPredicted RBP12.81□□□□□ -0.36
CHERP-201ENST00000198939 HSP90AB1P08238 724 aaKnown RBP12.8□□□□□ -0.36
CHERP-201ENST00000198939 LMOD2Q6P5Q4 547 aa12.8□□□□□ -0.36
CHERP-201ENST00000198939 MAP7D2Q96T17 732 aa12.8□□□□□ -0.36
CHERP-201ENST00000198939 PDZRN3Q9UPQ7 1066 aa12.8□□□□□ -0.36
CHERP-201ENST00000198939 PPP2R1AP30153 589 aa12.8□□□□□ -0.36
CHERP-201ENST00000198939 SKOR2Q2VWA4 1001 aaPredicted RBP12.8□□□□□ -0.36
CHERP-201ENST00000198939 SOS2Q07890 1332 aaPredicted RBP12.8□□□□□ -0.36
CHERP-201ENST00000198939 MORC1Q86VD1 984 aa12.79□□□□□ -0.36
CHERP-201ENST00000198939 R3HCC1Q9Y3T6 440 aaKnown RBP12.79□□□□□ -0.36
CHERP-201ENST00000198939 CCDC173Q0VFZ6 552 aa12.79□□□□□ -0.36
CHERP-201ENST00000198939 CARD14Q9BXL6 1004 aa12.79□□□□□ -0.36
CHERP-201ENST00000198939 NLRP6P59044 892 aa12.78□□□□□ -0.36
CHERP-201ENST00000198939 ZSCAN30Q86W11 494 aa12.78□□□□□ -0.36
CHERP-201ENST00000198939 KCNH5Q8NCM2 988 aa12.78□□□□□ -0.36
CHERP-201ENST00000198939 NASPP49321 788 aaPredicted RBP12.78□□□□□ -0.36
CHERP-201ENST00000198939 PTMSP20962 102 aa12.78□□□□□ -0.36
CHERP-201ENST00000198939 HAP1P54257 671 aaPredicted RBP12.78□□□□□ -0.36
CHERP-201ENST00000198939 CD163L1Q9NR16 1453 aa12.77□□□□□ -0.36
CHERP-201ENST00000198939 NEUROD2Q15784 382 aa12.77□□□□□ -0.36
CHERP-201ENST00000198939 SPATA31A3Q5VYP0 1347 aa12.77□□□□□ -0.37
CHERP-201ENST00000198939 MYOM1P52179 1685 aa12.77□□□□□ -0.37
CHERP-201ENST00000198939 FYB1O15117 783 aa12.76□□□□□ -0.37
CHERP-201ENST00000198939 TNS3Q68CZ2 1445 aa12.76□□□□□ -0.37
CHERP-201ENST00000198939 USP31Q70CQ4 1352 aa12.76□□□□□ -0.37
CHERP-201ENST00000198939 TPRNQ4KMQ1 711 aa12.76□□□□□ -0.37
CHERP-201ENST00000198939 FBXO41Q8TF61 875 aa12.76□□□□□ -0.37
CHERP-201ENST00000198939 XPCQ01831 940 aaPredicted RBP12.76□□□□□ -0.37
CHERP-201ENST00000198939 SPINK5Q9NQ38 1064 aaPredicted RBP12.76□□□□□ -0.37
CHERP-201ENST00000198939 AHDC1Q5TGY3 1603 aaPredicted RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms