RNA–Protein interactions for RNA: ENSMUST00000218879.1

Srp54b-202, Transcript of Signal recognition particle 54 kDa protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Srp54b, Length 3,642 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54b-202ENSMUST00000218879 Mdc1Q5PSV9 1707 aa13.39□□□□□ -0.27
Srp54b-202ENSMUST00000218879 1700122O11RikJ3QPW6 241 aa13.39□□□□□ -0.27
Srp54b-202ENSMUST00000218879 Ylpm1Q9R0I7 1386 aaKnown RBP13.39□□□□□ -0.27
Srp54b-202ENSMUST00000218879 EcsitQ9QZH6 435 aa13.39□□□□□ -0.27
Srp54b-202ENSMUST00000218879 Abca9Q8K449 1623 aa13.38□□□□□ -0.27
Srp54b-202ENSMUST00000218879 Irx1P81068 480 aa13.38□□□□□ -0.27
Srp54b-202ENSMUST00000218879 Fam71bQ5STT6 665 aa13.38□□□□□ -0.27
Srp54b-202ENSMUST00000218879 Stk26Q99JT2 416 aa13.38□□□□□ -0.27
Srp54b-202ENSMUST00000218879 Rbm25B2RY56 838 aaKnown RBP13.38□□□□□ -0.27
Srp54b-202ENSMUST00000218879 Myo1cQ9WTI7 1063 aa13.38□□□□□ -0.27
Srp54b-202ENSMUST00000218879 3425401B19RikD3Z1D3 1412 aa13.38□□□□□ -0.27
Srp54b-202ENSMUST00000218879 Ankrd26Q811D2 1581 aa13.38□□□□□ -0.27
Srp54b-202ENSMUST00000218879 Taf3Q5HZG4 932 aa13.38□□□□□ -0.27
Srp54b-202ENSMUST00000218879 Wdr60Q8C761 999 aa13.38□□□□□ -0.27
Srp54b-202ENSMUST00000218879 Otud6bQ8K2H2 294 aa13.38□□□□□ -0.27
Srp54b-202ENSMUST00000218879 Naip6Q9JIB6 1403 aa13.37□□□□□ -0.27
Srp54b-202ENSMUST00000218879 Depdc5P61460 1591 aa13.37□□□□□ -0.27
Srp54b-202ENSMUST00000218879 Nucb2P81117 420 aa13.37□□□□□ -0.27
Srp54b-202ENSMUST00000218879 Nxf2Q4ZGD8 691 aa13.37□□□□□ -0.27
Srp54b-202ENSMUST00000218879 Rnaseh1O70338 285 aa13.37□□□□□ -0.27
Srp54b-202ENSMUST00000218879 Bag4Q8CI61 457 aa13.37□□□□□ -0.27
Srp54b-202ENSMUST00000218879 Q9D1Z2 194 aa13.37□□□□□ -0.27
Srp54b-202ENSMUST00000218879 EzrP26040 586 aaKnown RBP13.36□□□□□ -0.27
Srp54b-202ENSMUST00000218879 Paxbp1P58501 919 aa13.36□□□□□ -0.27
Srp54b-202ENSMUST00000218879 Fbxw10Q5SUS0 1030 aa13.36□□□□□ -0.27
Srp54b-202ENSMUST00000218879 Gm10093D3YYI8 482 aa13.36□□□□□ -0.27
Srp54b-202ENSMUST00000218879 Hdac1O09106 482 aaKnown RBP13.36□□□□□ -0.27
Srp54b-202ENSMUST00000218879 Fam163bQ8BUM6 167 aa13.36□□□□□ -0.27
Srp54b-202ENSMUST00000218879 Cdc42bpaQ3UU96 1719 aa13.36□□□□□ -0.27
Srp54b-202ENSMUST00000218879 Phlpp2Q8BXA7 1320 aa13.36□□□□□ -0.27
Srp54b-202ENSMUST00000218879 Rfc1P35601 1131 aa13.36□□□□□ -0.27
Srp54b-202ENSMUST00000218879 Plcb3P51432 1234 aaKnown RBP13.35□□□□□ -0.27
Srp54b-202ENSMUST00000218879 Kiaa0754Q69ZZ9 979 aa13.35□□□□□ -0.27
Srp54b-202ENSMUST00000218879 E4f1Q8CCE9 783 aa13.35□□□□□ -0.27
Srp54b-202ENSMUST00000218879 MecomP14404 1042 aa13.35□□□□□ -0.27
Srp54b-202ENSMUST00000218879 Zscan21Q07231 555 aa13.35□□□□□ -0.27
Srp54b-202ENSMUST00000218879 Sugt1Q9CX34 336 aa13.35□□□□□ -0.27
Srp54b-202ENSMUST00000218879 Rprd2Q6NXI6 1469 aaKnown RBP13.35□□□□□ -0.27
Srp54b-202ENSMUST00000218879 AppP12023 770 aa13.34□□□□□ -0.27
Srp54b-202ENSMUST00000218879 Trim30aP15533 496 aa13.34□□□□□ -0.27
Srp54b-202ENSMUST00000218879 Tpm3P21107 285 aaKnown RBP13.34□□□□□ -0.27
Srp54b-202ENSMUST00000218879 CenpqQ9CPQ5 267 aa13.34□□□□□ -0.27
Srp54b-202ENSMUST00000218879 Ipo7Q9EPL8 1038 aaKnown RBP13.34□□□□□ -0.27
Srp54b-202ENSMUST00000218879 Ccdc141E9Q8Q6 1531 aa13.34□□□□□ -0.27
Srp54b-202ENSMUST00000218879 Gucy2cQ3UWA6 1072 aa13.33□□□□□ -0.27
Srp54b-202ENSMUST00000218879 Cep131Q62036 1060 aa13.33□□□□□ -0.27
Srp54b-202ENSMUST00000218879 Impdh2P24547 514 aa13.33□□□□□ -0.28
Srp54b-202ENSMUST00000218879 Nectin2P32507 530 aa13.33□□□□□ -0.28
Srp54b-202ENSMUST00000218879 Atp6v1aP50516 617 aaKnown RBP13.33□□□□□ -0.28
Srp54b-202ENSMUST00000218879 Kmt5bQ3U8K7 883 aa13.33□□□□□ -0.28
Srp54b-202ENSMUST00000218879 Smc4Q8CG47 1286 aa13.33□□□□□ -0.28
Srp54b-202ENSMUST00000218879 Med4Q9CQA5 270 aa13.33□□□□□ -0.28
Srp54b-202ENSMUST00000218879 Dip2aQ8BWT5 1523 aa13.33□□□□□ -0.28
Srp54b-202ENSMUST00000218879 Slc7a3P70423 618 aa13.33□□□□□ -0.28
Srp54b-202ENSMUST00000218879 GclcP97494 637 aa13.32□□□□□ -0.28
Srp54b-202ENSMUST00000218879 Trim58Q5NCC9 485 aa13.32□□□□□ -0.28
Srp54b-202ENSMUST00000218879 SrrtQ99MR6 875 aaKnown RBP13.32□□□□□ -0.28
Srp54b-202ENSMUST00000218879 Hmgb1P63158 215 aaKnown RBP13.32□□□□□ -0.28
Srp54b-202ENSMUST00000218879 Zfp397Q7TNK4 527 aa13.32□□□□□ -0.28
Srp54b-202ENSMUST00000218879 Syt10Q9R0N4 523 aa13.32□□□□□ -0.28
Srp54b-202ENSMUST00000218879 Rsph10bE9PYQ0 876 aa13.32□□□□□ -0.28
Srp54b-202ENSMUST00000218879 Atp11aP98197 1187 aa13.32□□□□□ -0.28
Srp54b-202ENSMUST00000218879 Zcwpw1Q6IR42 630 aa13.32□□□□□ -0.28
Srp54b-202ENSMUST00000218879 SarnpQ9D1J3 210 aaKnown RBP13.32□□□□□ -0.28
Srp54b-202ENSMUST00000218879 Sema3fO88632 785 aa13.31□□□□□ -0.28
Srp54b-202ENSMUST00000218879 CrebrfQ8CDG5 640 aaKnown RBP13.31□□□□□ -0.28
Srp54b-202ENSMUST00000218879 Ccdc73Q8CDM4 1066 aa13.31□□□□□ -0.28
Srp54b-202ENSMUST00000218879 PdiltQ9DAN1 588 aa13.31□□□□□ -0.28
Srp54b-202ENSMUST00000218879 Cwc15Q9JHS9 229 aaKnown RBP13.31□□□□□ -0.28
Srp54b-202ENSMUST00000218879 Znf608Q56A10 1511 aa13.31□□□□□ -0.28
Srp54b-202ENSMUST00000218879 Kiaa1551Q5DTW7 1521 aa13.31□□□□□ -0.28
Srp54b-202ENSMUST00000218879 Klhl34A2AI76 644 aa13.31□□□□□ -0.28
Srp54b-202ENSMUST00000218879 Nsfl1cQ9CZ44 370 aaKnown RBP13.31□□□□□ -0.28
Srp54b-202ENSMUST00000218879 Slc5a4aQ9ET37 656 aa13.31□□□□□ -0.28
Srp54b-202ENSMUST00000218879 Fancd2Q80V62 1450 aa13.31□□□□□ -0.28
Srp54b-202ENSMUST00000218879 Cnga1P29974 684 aa13.31□□□□□ -0.28
Srp54b-202ENSMUST00000218879 Jph4Q80WT0 628 aa13.31□□□□□ -0.28
Srp54b-202ENSMUST00000218879 Fam184aE9PW83 1143 aa13.3□□□□□ -0.28
Srp54b-202ENSMUST00000218879 Sh3gl3Q62421 347 aa13.3□□□□□ -0.28
Srp54b-202ENSMUST00000218879 Kdm6bQ5NCY0 1641 aa13.3□□□□□ -0.28
Srp54b-202ENSMUST00000218879 Brsk2Q69Z98 735 aa13.3□□□□□ -0.28
Srp54b-202ENSMUST00000218879 Kdm5cP41230 1554 aa13.3□□□□□ -0.28
Srp54b-202ENSMUST00000218879 Serpinb6bO08804 377 aa13.3□□□□□ -0.28
Srp54b-202ENSMUST00000218879 Ankrd49Q8VE42 238 aa13.3□□□□□ -0.28
Srp54b-202ENSMUST00000218879 Atl3Q91YH5 541 aa13.3□□□□□ -0.28
Srp54b-202ENSMUST00000218879 Setd1aE9PYH6 1716 aa13.29□□□□□ -0.28
Srp54b-202ENSMUST00000218879 Lcmt1A0A0U1RNF2 332 aa13.29□□□□□ -0.28
Srp54b-202ENSMUST00000218879 Paf1Q8K2T8 535 aa13.29□□□□□ -0.28
Srp54b-202ENSMUST00000218879 Mx2Q9WVP9 655 aa13.29□□□□□ -0.28
Srp54b-202ENSMUST00000218879 Plch2A2AP18 1501 aa13.28□□□□□ -0.28
Srp54b-202ENSMUST00000218879 Cspp1B2RX88 1205 aa13.28□□□□□ -0.28
Srp54b-202ENSMUST00000218879 Acbd5Q5XG73 508 aa13.28□□□□□ -0.28
Srp54b-202ENSMUST00000218879 Gm9992B2RWK3 458 aa13.28□□□□□ -0.28
Srp54b-202ENSMUST00000218879 Unc93aQ710D3 458 aa13.28□□□□□ -0.28
Srp54b-202ENSMUST00000218879 Usp35M0QWN7 1009 aa13.27□□□□□ -0.28
Srp54b-202ENSMUST00000218879 Mrpl12Q9DB15 201 aaKnown RBP13.27□□□□□ -0.28
Srp54b-202ENSMUST00000218879 Mcm6P97311 821 aa13.27□□□□□ -0.29
Srp54b-202ENSMUST00000218879 Zrsr2Q62377 462 aaKnown RBP13.27□□□□□ -0.29
Srp54b-202ENSMUST00000218879 Tex14Q7M6U3 1450 aa13.27□□□□□ -0.29
Srp54b-202ENSMUST00000218879 Prdm10Q3UTQ7 1184 aa13.27□□□□□ -0.29
Retrieved 100 of 22,080 RNA–protein pairs in 32.3 ms