RNA–Protein interactions for RNA: ENSMUST00000109578.7

Vps54-202, Transcript of Vacuolar protein sorting-associated protein 54, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Vps54, Length 4,273 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54-202ENSMUST00000109578 1700019A02RikA0A087WPV9 146 aa14.38□□□□□ -0.11
Vps54-202ENSMUST00000109578 Tbc1d9Q3UYK3 1264 aa14.38□□□□□ -0.11
Vps54-202ENSMUST00000109578 Abca14E9Q8F8 1683 aa14.38□□□□□ -0.11
Vps54-202ENSMUST00000109578 NktrP30415 1453 aa14.37□□□□□ -0.11
Vps54-202ENSMUST00000109578 Ccdc146E9Q9F7 977 aa14.37□□□□□ -0.11
Vps54-202ENSMUST00000109578 Ppp1r15aP17564 657 aa14.37□□□□□ -0.11
Vps54-202ENSMUST00000109578 Adamts7Q68SA9 1657 aa14.36□□□□□ -0.11
Vps54-202ENSMUST00000109578 Gnai1B2RSH2 354 aa14.36□□□□□ -0.11
Vps54-202ENSMUST00000109578 Ddit3P35639 168 aa14.36□□□□□ -0.11
Vps54-202ENSMUST00000109578 Gnai3Q9DC51 354 aa14.36□□□□□ -0.11
Vps54-202ENSMUST00000109578 CarsQ9ER72 831 aaKnown RBP14.36□□□□□ -0.11
Vps54-202ENSMUST00000109578 Arhgef28P97433 1693 aa14.36□□□□□ -0.11
Vps54-202ENSMUST00000109578 Il4rP16382 810 aa14.36□□□□□ -0.11
Vps54-202ENSMUST00000109578 Fgd1P52734 960 aa14.36□□□□□ -0.11
Vps54-202ENSMUST00000109578 Stk11ipQ3TAA7 1072 aa14.36□□□□□ -0.11
Vps54-202ENSMUST00000109578 Gm10093D3YYI8 482 aa14.35□□□□□ -0.11
Vps54-202ENSMUST00000109578 Hdac1O09106 482 aaKnown RBP14.35□□□□□ -0.11
Vps54-202ENSMUST00000109578 Cul9Q80TT8 1865 aa14.35□□□□□ -0.11
Vps54-202ENSMUST00000109578 Atp7bQ64446 1462 aa14.35□□□□□ -0.11
Vps54-202ENSMUST00000109578 Trim27Q62158 513 aa14.35□□□□□ -0.11
Vps54-202ENSMUST00000109578 Aifm3Q3TY86 605 aa14.35□□□□□ -0.11
Vps54-202ENSMUST00000109578 Pibf1E9Q6K3 756 aa14.34□□□□□ -0.11
Vps54-202ENSMUST00000109578 LifrP42703 1092 aa14.34□□□□□ -0.11
Vps54-202ENSMUST00000109578 Ric3Q8BPM6 367 aa14.34□□□□□ -0.11
Vps54-202ENSMUST00000109578 Rsph6aQ8CDR2 708 aa14.34□□□□□ -0.11
Vps54-202ENSMUST00000109578 Wwc1Q5SXA9 1104 aa14.33□□□□□ -0.11
Vps54-202ENSMUST00000109578 Kcnn1Q9EQR3 537 aa14.33□□□□□ -0.12
Vps54-202ENSMUST00000109578 Triml2E9PW10 424 aa14.33□□□□□ -0.12
Vps54-202ENSMUST00000109578 DekQ7TNV0 380 aaKnown RBP14.33□□□□□ -0.12
Vps54-202ENSMUST00000109578 Znf541Q0GGX2 1363 aa14.33□□□□□ -0.12
Vps54-202ENSMUST00000109578 AU015836B2RUM3 263 aa14.32□□□□□ -0.12
Vps54-202ENSMUST00000109578 MpripP97434 1024 aa14.32□□□□□ -0.12
Vps54-202ENSMUST00000109578 CltcQ68FD5 1675 aaKnown RBP14.32□□□□□ -0.12
Vps54-202ENSMUST00000109578 Cetn4Q8K4K1 168 aa14.32□□□□□ -0.12
Vps54-202ENSMUST00000109578 Vsig10D3YX43 558 aa14.32□□□□□ -0.12
Vps54-202ENSMUST00000109578 FanclQ9CR14 375 aa14.32□□□□□ -0.12
Vps54-202ENSMUST00000109578 Smarca5Q91ZW3 1051 aaKnown RBP14.3□□□□□ -0.12
Vps54-202ENSMUST00000109578 Kif13aQ9EQW7 1749 aa14.3□□□□□ -0.12
Vps54-202ENSMUST00000109578 Rsph3aQ3UFY4 516 aa14.3□□□□□ -0.12
Vps54-202ENSMUST00000109578 Ppp1r18Q8BQ30 594 aa14.3□□□□□ -0.12
Vps54-202ENSMUST00000109578 Psme1P97371 249 aa14.29□□□□□ -0.12
Vps54-202ENSMUST00000109578 Usp32F8VPZ3 1604 aa14.29□□□□□ -0.12
Vps54-202ENSMUST00000109578 Txndc2Q6P902 515 aa14.29□□□□□ -0.12
Vps54-202ENSMUST00000109578 MarsQ68FL6 902 aaKnown RBP14.28□□□□□ -0.12
Vps54-202ENSMUST00000109578 Idi2Q8BFZ6 227 aa14.28□□□□□ -0.12
Vps54-202ENSMUST00000109578 Eif4g2Q62448 906 aaKnown RBP14.28□□□□□ -0.12
Vps54-202ENSMUST00000109578 NgefQ8CHT1 710 aa14.28□□□□□ -0.12
Vps54-202ENSMUST00000109578 Plekhg1F6S200 1446 aa14.27□□□□□ -0.12
Vps54-202ENSMUST00000109578 Ercc6l2Q9JIM3 1537 aa14.27□□□□□ -0.12
Vps54-202ENSMUST00000109578 IghaA0A0A6YXW6 389 aa14.27□□□□□ -0.12
Vps54-202ENSMUST00000109578 Eif4a2P10630 407 aa14.27□□□□□ -0.12
Vps54-202ENSMUST00000109578 Chmp4bQ9D8B3 224 aaKnown RBP14.27□□□□□ -0.13
Vps54-202ENSMUST00000109578 Kif24Q6NWW5 1356 aa14.27□□□□□ -0.13
Vps54-202ENSMUST00000109578 Stk31Q99MW1 1018 aa14.27□□□□□ -0.13
Vps54-202ENSMUST00000109578 SlkO54988 1233 aa14.26□□□□□ -0.13
Vps54-202ENSMUST00000109578 Phf14Q9D4H9 881 aa14.26□□□□□ -0.13
Vps54-202ENSMUST00000109578 Ggnbp2Q5SV77 696 aa14.26□□□□□ -0.13
Vps54-202ENSMUST00000109578 Itsn1Q9Z0R4 1714 aa14.25□□□□□ -0.13
Vps54-202ENSMUST00000109578 Fam13aQ8BGI4 693 aa14.25□□□□□ -0.13
Vps54-202ENSMUST00000109578 Cc2d1aQ8K1A6 943 aa14.25□□□□□ -0.13
Vps54-202ENSMUST00000109578 Pdcl3Q8BVF2 240 aa14.25□□□□□ -0.13
Vps54-202ENSMUST00000109578 4933402E13RikQ9D4D2 429 aa14.24□□□□□ -0.13
Vps54-202ENSMUST00000109578 Rab11fip3Q8CHD8 1047 aa14.24□□□□□ -0.13
Vps54-202ENSMUST00000109578 Snap23O09044 210 aa14.24□□□□□ -0.13
Vps54-202ENSMUST00000109578 Znf692Q3U381 531 aa14.24□□□□□ -0.13
Vps54-202ENSMUST00000109578 Ppip5k2Q6ZQB6 1129 aa14.24□□□□□ -0.13
Vps54-202ENSMUST00000109578 Kdm4cQ8VCD7 1054 aa14.24□□□□□ -0.13
Vps54-202ENSMUST00000109578 CenppQ9CZ92 286 aa14.24□□□□□ -0.13
Vps54-202ENSMUST00000109578 HnrnpmQ9D0E1 729 aaKnown RBP14.24□□□□□ -0.13
Vps54-202ENSMUST00000109578 Nwd1A6H603 1563 aa14.24□□□□□ -0.13
Vps54-202ENSMUST00000109578 CalcaP70160 136 aa14.23□□□□□ -0.13
Vps54-202ENSMUST00000109578 EngaseQ8BX80 734 aa14.23□□□□□ -0.13
Vps54-202ENSMUST00000109578 Bloc1s4Q8VED2 215 aa14.23□□□□□ -0.13
Vps54-202ENSMUST00000109578 HnrnpuQ8VEK3 800 aaKnown RBP14.23□□□□□ -0.13
Vps54-202ENSMUST00000109578 Prkar2bP31324 416 aa14.23□□□□□ -0.13
Vps54-202ENSMUST00000109578 Cavin2Q63918 418 aaKnown RBP14.23□□□□□ -0.13
Vps54-202ENSMUST00000109578 Aldh8a1Q8BH00 487 aa14.23□□□□□ -0.13
Vps54-202ENSMUST00000109578 Prim1P20664 417 aa14.23□□□□□ -0.13
Vps54-202ENSMUST00000109578 Ppp6r3Q922D4 844 aa14.23□□□□□ -0.13
Vps54-202ENSMUST00000109578 Synj2Q9D2G5 1434 aa14.23□□□□□ -0.13
Vps54-202ENSMUST00000109578 Paxip1Q6NZQ4 1056 aa14.22□□□□□ -0.13
Vps54-202ENSMUST00000109578 Cgnl1Q6AW69 1298 aa14.22□□□□□ -0.13
Vps54-202ENSMUST00000109578 Pdia3P27773 505 aaKnown RBP14.22□□□□□ -0.13
Vps54-202ENSMUST00000109578 Chl1P70232 1209 aa14.21□□□□□ -0.13
Vps54-202ENSMUST00000109578 Sos1Q62245 1319 aa14.21□□□□□ -0.13
Vps54-202ENSMUST00000109578 CatipB9EKE5 520 aa14.21□□□□□ -0.13
Vps54-202ENSMUST00000109578 Casq1O09165 405 aa14.21□□□□□ -0.14
Vps54-202ENSMUST00000109578 TmpoQ61033 693 aaKnown RBP14.21□□□□□ -0.14
Vps54-202ENSMUST00000109578 Ncapd2Q8K2Z4 1392 aa14.2□□□□□ -0.14
Vps54-202ENSMUST00000109578 Gcc1Q9D4H2 778 aa14.2□□□□□ -0.14
Vps54-202ENSMUST00000109578 PplQ9R269 1755 aa14.2□□□□□ -0.14
Vps54-202ENSMUST00000109578 Spef2Q8C9J3 1734 aa14.2□□□□□ -0.14
Vps54-202ENSMUST00000109578 Chd4Q6PDQ2 1915 aaKnown RBP14.2□□□□□ -0.14
Vps54-202ENSMUST00000109578 Tm6sf1P58749 370 aa14.2□□□□□ -0.14
Vps54-202ENSMUST00000109578 Nucb1Q02819 459 aaKnown RBP14.19□□□□□ -0.14
Vps54-202ENSMUST00000109578 1700010I14RikQ7TPG0 532 aa14.19□□□□□ -0.14
Vps54-202ENSMUST00000109578 Atg4a-psA0A0G2JFS9 396 aa14.19□□□□□ -0.14
Vps54-202ENSMUST00000109578 Atg4aQ8C9S8 396 aa14.19□□□□□ -0.14
Vps54-202ENSMUST00000109578 Bag4Q8CI61 457 aa14.19□□□□□ -0.14
Vps54-202ENSMUST00000109578 Chmp4cQ9D7F7 232 aa14.19□□□□□ -0.14
Retrieved 100 of 22,080 RNA–protein pairs in 21.7 ms