RNA–Protein interactions for RNA: tY(GUA)J2

SUP4, Transcript of Tyrosine tRNA (tRNA-Tyr), predicted by tRNAscan-SE analysis, yeast

Gene SUP4, Length 75 nt, Biotype tRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SUP4	tY(GUA)J2	FAR11	P53917	953 aa		6.72	□□□□□ -1.33
SUP4	tY(GUA)J2	CBP3	P21560	335 aa		6.71	□□□□□ -1.34
SUP4	tY(GUA)J2	BDF1	P35817	686 aa		6.71	□□□□□ -1.34
SUP4	tY(GUA)J2	NPR2	P39923	615 aa		6.71	□□□□□ -1.34
SUP4	tY(GUA)J2	TPM2	P40414	161 aa		6.71	□□□□□ -1.34
SUP4	tY(GUA)J2	TFG2	P41896	400 aa	Predicted RBP	6.71	□□□□□ -1.34
SUP4	tY(GUA)J2	STU2	P46675	888 aa		6.71	□□□□□ -1.34
SUP4	tY(GUA)J2	SSL2	Q00578	843 aa		6.71	□□□□□ -1.34
SUP4	tY(GUA)J2	SYF1	Q04048	859 aa	Predicted RBP	6.71	□□□□□ -1.34
SUP4	tY(GUA)J2	INM2	Q05533	292 aa		6.71	□□□□□ -1.34
SUP4	tY(GUA)J2	BDF2	Q07442	638 aa		6.71	□□□□□ -1.34
SUP4	tY(GUA)J2	ISW2	Q08773	1120 aa		6.71	□□□□□ -1.34
SUP4	tY(GUA)J2	HXK1	P04806	485 aa	Known RBP	6.7	□□□□□ -1.34
SUP4	tY(GUA)J2	HCA4	P20448	770 aa	Known RBP	6.7	□□□□□ -1.34
SUP4	tY(GUA)J2	GRX7	P38068	203 aa		6.7	□□□□□ -1.34
SUP4	tY(GUA)J2	RPN10	P38886	268 aa	Known RBP	6.7	□□□□□ -1.34
SUP4	tY(GUA)J2	ICP55	P40051	511 aa		6.7	□□□□□ -1.34
SUP4	tY(GUA)J2	YIR042C	P40586	236 aa		6.7	□□□□□ -1.34
SUP4	tY(GUA)J2	UFD2	P54860	961 aa		6.7	□□□□□ -1.34
SUP4	tY(GUA)J2	TIM50	Q02776	476 aa		6.7	□□□□□ -1.34
SUP4	tY(GUA)J2	VMS1	Q04311	632 aa	Known RBP	6.7	□□□□□ -1.34
SUP4	tY(GUA)J2	YMR074C	Q04773	145 aa		6.7	□□□□□ -1.34
SUP4	tY(GUA)J2	PPM2	Q08282	695 aa		6.7	□□□□□ -1.34
SUP4	tY(GUA)J2	RGP1	P16664	663 aa		6.69	□□□□□ -1.34
SUP4	tY(GUA)J2	COQ1	P18900	473 aa		6.69	□□□□□ -1.34
SUP4	tY(GUA)J2	MFT1	P33441	392 aa	Known RBP	6.69	□□□□□ -1.34
SUP4	tY(GUA)J2	BMH2	P34730	273 aa	Known RBP	6.69	□□□□□ -1.34
SUP4	tY(GUA)J2	BOI1	P38041	980 aa	Known RBP	6.69	□□□□□ -1.34
SUP4	tY(GUA)J2	RPN1	P38764	993 aa	Known RBP	6.69	□□□□□ -1.34
SUP4	tY(GUA)J2	AKR1	P39010	764 aa		6.69	□□□□□ -1.34
SUP4	tY(GUA)J2	NOC2	P39744	710 aa	Known RBP	6.69	□□□□□ -1.34
SUP4	tY(GUA)J2	HPC2	Q01448	625 aa		6.69	□□□□□ -1.34
SUP4	tY(GUA)J2	IRC3	Q06683	689 aa		6.69	□□□□□ -1.34
SUP4	tY(GUA)J2	RPL22A	P05749	121 aa	Known RBP	6.68	□□□□□ -1.34
SUP4	tY(GUA)J2	ASF1	P32447	279 aa		6.68	□□□□□ -1.34
SUP4	tY(GUA)J2	ALG2	P43636	503 aa		6.68	□□□□□ -1.34
SUP4	tY(GUA)J2	RPS15	Q01855	142 aa	Known RBP	6.68	□□□□□ -1.34
SUP4	tY(GUA)J2	SAS4	Q04003	481 aa		6.68	□□□□□ -1.34
SUP4	tY(GUA)J2	MRD1	Q06106	887 aa	Known RBP	6.68	□□□□□ -1.34
SUP4	tY(GUA)J2	PSF3	Q12146	194 aa		6.68	□□□□□ -1.34
SUP4	tY(GUA)J2	GSY2	P27472	705 aa		6.67	□□□□□ -1.34
SUP4	tY(GUA)J2	SPC110	P32380	944 aa		6.67	□□□□□ -1.34
SUP4	tY(GUA)J2	FRD1	P32614	470 aa	Known RBP	6.67	□□□□□ -1.34
SUP4	tY(GUA)J2	PTK1	P36002	662 aa	Predicted RBP	6.67	□□□□□ -1.34
SUP4	tY(GUA)J2	RPG1	P38249	964 aa	Known RBP	6.67	□□□□□ -1.34
SUP4	tY(GUA)J2	LEO1	P38439	464 aa		6.67	□□□□□ -1.34
SUP4	tY(GUA)J2	HOS3	Q02959	697 aa	Known RBP	6.67	□□□□□ -1.34
SUP4	tY(GUA)J2	UBX2	Q04228	584 aa		6.67	□□□□□ -1.34
SUP4	tY(GUA)J2	TFC6	Q06339	672 aa		6.67	□□□□□ -1.34
SUP4	tY(GUA)J2	NBL1	Q3E7Y6	73 aa		6.67	□□□□□ -1.34
SUP4	tY(GUA)J2	CHO2	P05374	869 aa	Known RBP	6.66	□□□□□ -1.34
SUP4	tY(GUA)J2	SWI4	P25302	1093 aa	Known RBP	6.66	□□□□□ -1.34
SUP4	tY(GUA)J2	MDL2	P33311	773 aa		6.66	□□□□□ -1.34
SUP4	tY(GUA)J2	MAL31	P38156	614 aa		6.66	□□□□□ -1.34
SUP4	tY(GUA)J2	RTS1	P38903	757 aa		6.66	□□□□□ -1.34
SUP4	tY(GUA)J2	LYS4	P49367	693 aa	Predicted RBP	6.66	□□□□□ -1.34
SUP4	tY(GUA)J2	RPT4	P53549	437 aa	Known RBP	6.66	□□□□□ -1.34
SUP4	tY(GUA)J2	GDE1	Q02979	1223 aa		6.66	□□□□□ -1.34
SUP4	tY(GUA)J2	CSC1	Q06538	782 aa		6.66	□□□□□ -1.34
SUP4	tY(GUA)J2	RIX7	Q07844	837 aa	Known RBP	6.66	□□□□□ -1.34
SUP4	tY(GUA)J2	GET3	Q12154	354 aa	Known RBP	6.66	□□□□□ -1.34
SUP4	tY(GUA)J2	KRE2	P27809	442 aa		6.65	□□□□□ -1.34
SUP4	tY(GUA)J2	SRP40	P32583	406 aa	Predicted RBP	6.65	□□□□□ -1.34
SUP4	tY(GUA)J2	SAC6	P32599	642 aa	Known RBP	6.65	□□□□□ -1.34
SUP4	tY(GUA)J2	ANP1	P32629	500 aa		6.65	□□□□□ -1.34
SUP4	tY(GUA)J2	MNR2	P35724	969 aa		6.65	□□□□□ -1.34
SUP4	tY(GUA)J2	SPL2	P38839	148 aa		6.65	□□□□□ -1.34
SUP4	tY(GUA)J2	FYV10	P40492	516 aa		6.65	□□□□□ -1.34
SUP4	tY(GUA)J2	MSH4	P40965	878 aa	Predicted RBP	6.65	□□□□□ -1.34
SUP4	tY(GUA)J2	YFH7	P43591	353 aa		6.65	□□□□□ -1.34
SUP4	tY(GUA)J2	JJJ2	P46997	583 aa		6.65	□□□□□ -1.34
SUP4	tY(GUA)J2	PIP2	P52960	996 aa		6.65	□□□□□ -1.34
SUP4	tY(GUA)J2	IRC4	Q03036	179 aa		6.65	□□□□□ -1.34
SUP4	tY(GUA)J2	WAR1	Q03631	944 aa		6.65	□□□□□ -1.34
SUP4	tY(GUA)J2	DCS2	Q12123	353 aa		6.65	□□□□□ -1.34
SUP4	tY(GUA)J2	CEX1	Q12453	761 aa		6.65	□□□□□ -1.34
SUP4	tY(GUA)J2	SIT4	P20604	311 aa		6.64	□□□□□ -1.35
SUP4	tY(GUA)J2	BUD31	P25337	157 aa	Predicted RBP	6.64	□□□□□ -1.35
SUP4	tY(GUA)J2	MCM4	P30665	933 aa	Known RBP	6.64	□□□□□ -1.35
SUP4	tY(GUA)J2	RPT3	P33298	428 aa	Known RBP	6.64	□□□□□ -1.35
SUP4	tY(GUA)J2	RXT2	P38255	430 aa		6.64	□□□□□ -1.35
SUP4	tY(GUA)J2	TCD1	P38756	429 aa		6.64	□□□□□ -1.35
SUP4	tY(GUA)J2	HCR1	Q05775	265 aa	Known RBP	6.64	□□□□□ -1.35
SUP4	tY(GUA)J2	ARP8	Q12386	881 aa	Known RBP RIP-Chip data	6.64	□□□□□ -1.35	not detected
SUP4	tY(GUA)J2	CDC6	P09119	513 aa		6.63	□□□□□ -1.35
SUP4	tY(GUA)J2	RNR3	P21672	869 aa	Known RBP	6.63	□□□□□ -1.35
SUP4	tY(GUA)J2	MAK31	P23059	88 aa		6.63	□□□□□ -1.35
SUP4	tY(GUA)J2	LCB1	P25045	558 aa	Known RBP	6.63	□□□□□ -1.35
SUP4	tY(GUA)J2	MYO3	P36006	1272 aa		6.63	□□□□□ -1.35
SUP4	tY(GUA)J2	TOS1	P38288	455 aa		6.63	□□□□□ -1.35
SUP4	tY(GUA)J2	CEP3	P40969	608 aa		6.63	□□□□□ -1.35
SUP4	tY(GUA)J2	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	6.63	□□□□□ -1.35	not detected
SUP4	tY(GUA)J2	ALD2	P47771	506 aa		6.63	□□□□□ -1.35
SUP4	tY(GUA)J2	CTH1	P47976	325 aa		6.63	□□□□□ -1.35
SUP4	tY(GUA)J2	CUE3	P53137	624 aa	Known RBP	6.63	□□□□□ -1.35
SUP4	tY(GUA)J2	RTC4	P53850	401 aa		6.63	□□□□□ -1.35
SUP4	tY(GUA)J2	NAF1	P53919	492 aa	Known RBP	6.63	□□□□□ -1.35
SUP4	tY(GUA)J2	GFD1	Q04839	188 aa	Known RBP	6.63	□□□□□ -1.35
SUP4	tY(GUA)J2	YCG1	Q06680	1035 aa		6.63	□□□□□ -1.35
SUP4	tY(GUA)J2	YPL260W	Q08977	551 aa		6.63	□□□□□ -1.35

Retrieved 100 of 5,963 RNA–protein pairs in 14.6 ms