RNA–Protein interactions for RNA: YPR010C

RPA135, Transcript of RNA polymerase I second largest subunit A135, yeastyeast

Gene RPA135, Length 3,612 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPA135YPR010C UGA2P38067 497 aa3.84□□□□□ -1.79
RPA135YPR010C SPT8P38915 602 aa3.84□□□□□ -1.79
RPA135YPR010C NPR2P39923 615 aa3.84□□□□□ -1.79
RPA135YPR010C IRC8P47046 822 aa3.84□□□□□ -1.79
RPA135YPR010C UFD2P54860 961 aa3.84□□□□□ -1.79
RPA135YPR010C YLH47Q06493 454 aa3.84□□□□□ -1.79
RPA135YPR010C DPH6Q12429 685 aa3.84□□□□□ -1.79
RPA135YPR010C ATE1P16639 503 aa3.84□□□□□ -1.8
RPA135YPR010C PFK2P16862 959 aaKnown RBP RIP-Chip data3.84□□□□□ -1.8not detected
RPA135YPR010C BIM1P40013 344 aa3.84□□□□□ -1.8
RPA135YPR010C MSN5P52918 1224 aa3.84□□□□□ -1.8
RPA135YPR010C RAT1Q02792 1006 aaKnown RBP3.84□□□□□ -1.8
RPA135YPR010C ESC2Q06340 456 aa3.84□□□□□ -1.8
RPA135YPR010C HIF1Q12373 385 aa3.84□□□□□ -1.8
RPA135YPR010C RKM4Q12504 494 aa3.84□□□□□ -1.8
RPA135YPR010C NBL1Q3E7Y6 73 aa3.84□□□□□ -1.8
RPA135YPR010C HXK1P04806 485 aaKnown RBP3.83□□□□□ -1.8
RPA135YPR010C CDC15P27636 974 aa3.83□□□□□ -1.8
RPA135YPR010C ICL1P28240 557 aaPredicted RBP3.83□□□□□ -1.8
RPA135YPR010C YBL086CP38177 466 aa3.83□□□□□ -1.8
RPA135YPR010C ALD3P54114 506 aa3.83□□□□□ -1.8
RPA135YPR010C GIS4Q04233 774 aa3.83□□□□□ -1.8
RPA135YPR010C CPA2P03965 1118 aaKnown RBP3.83□□□□□ -1.8
RPA135YPR010C VPS8P39702 1274 aa3.83□□□□□ -1.8
RPA135YPR010C KEX1P09620 729 aa3.83□□□□□ -1.8
RPA135YPR010C TRL1P09880 827 aaKnown RBP3.83□□□□□ -1.8
RPA135YPR010C GAL11P19659 1081 aa3.83□□□□□ -1.8
RPA135YPR010C PEP3P27801 918 aa3.83□□□□□ -1.8
RPA135YPR010C GRX7P38068 203 aa3.83□□□□□ -1.8
RPA135YPR010C PIP2P52960 996 aa3.83□□□□□ -1.8
RPA135YPR010C LCD1Q04377 747 aa3.83□□□□□ -1.8
RPA135YPR010C YML083CQ04526 418 aa3.83□□□□□ -1.8
RPA135YPR010C PEX19Q07418 342 aa3.83□□□□□ -1.8
RPA135YPR010C TLG2Q08144 397 aa3.83□□□□□ -1.8
RPA135YPR010C TUF1P02992 437 aaKnown RBP3.82□□□□□ -1.8
RPA135YPR010C MSH3P25336 1018 aa3.82□□□□□ -1.8
RPA135YPR010C RDS1P25611 832 aa3.82□□□□□ -1.8
RPA135YPR010C HEM3P28789 327 aa3.82□□□□□ -1.8
RPA135YPR010C TOM20P35180 183 aa3.82□□□□□ -1.8
RPA135YPR010C MET1P36150 593 aa3.82□□□□□ -1.8
RPA135YPR010C GRX3Q03835 250 aa3.82□□□□□ -1.8
RPA135YPR010C EST2Q06163 884 aa3.82□□□□□ -1.8
RPA135YPR010C YPL216WQ08964 1102 aa3.82□□□□□ -1.8
RPA135YPR010C ROM2P51862 1356 aaKnown RBP3.82□□□□□ -1.8
RPA135YPR010C MNR2P35724 969 aa3.82□□□□□ -1.8
RPA135YPR010C TTI1P36097 1038 aa3.82□□□□□ -1.8
RPA135YPR010C AKR1P39010 764 aa3.82□□□□□ -1.8
RPA135YPR010C TIF4632P39936 914 aaKnown RBP3.82□□□□□ -1.8
RPA135YPR010C AIM21P40563 679 aa3.82□□□□□ -1.8
RPA135YPR010C HDA1P53973 706 aa3.82□□□□□ -1.8
RPA135YPR010C SSL2Q00578 843 aa3.82□□□□□ -1.8
RPA135YPR010C TIM50Q02776 476 aa3.82□□□□□ -1.8
RPA135YPR010C CHO2P05374 869 aaKnown RBP3.82□□□□□ -1.8
RPA135YPR010C RIT1P23796 513 aa3.82□□□□□ -1.8
RPA135YPR010C SMY1P32364 656 aaKnown RBP3.82□□□□□ -1.8
RPA135YPR010C NFU1P32860 256 aa3.82□□□□□ -1.8
RPA135YPR010C BOI1P38041 980 aaKnown RBP3.82□□□□□ -1.8
RPA135YPR010C CCT5P40413 562 aaKnown RBP3.82□□□□□ -1.8
RPA135YPR010C MSH4P40965 878 aaPredicted RBP3.82□□□□□ -1.8
RPA135YPR010C PTK2P47116 818 aaKnown RBP3.82□□□□□ -1.8
RPA135YPR010C RNH70P53331 553 aa3.82□□□□□ -1.8
RPA135YPR010C IRC4Q03036 179 aa3.82□□□□□ -1.8
RPA135YPR010C YMR074CQ04773 145 aa3.82□□□□□ -1.8
RPA135YPR010C CDC16P09798 840 aa3.81□□□□□ -1.8
RPA135YPR010C BIO2P32451 375 aa3.81□□□□□ -1.8
RPA135YPR010C CAB3P36076 571 aa3.81□□□□□ -1.8
RPA135YPR010C YER130CP39959 443 aa3.81□□□□□ -1.8
RPA135YPR010C SQS1P53866 767 aaKnown RBP3.81□□□□□ -1.8
RPA135YPR010C HRQ1Q05549 1077 aa3.81□□□□□ -1.8
RPA135YPR010C TOS4Q06266 489 aa3.81□□□□□ -1.8
RPA135YPR010C MCM2P29469 868 aa3.81□□□□□ -1.8
RPA135YPR010C RPN12P32496 274 aa3.81□□□□□ -1.8
RPA135YPR010C AFG2P32794 780 aa3.81□□□□□ -1.8
RPA135YPR010C RER2P35196 286 aa3.81□□□□□ -1.8
RPA135YPR010C KNS1P32350 737 aaPredicted RBP3.81□□□□□ -1.8
RPA135YPR010C IOC3P43596 787 aa3.81□□□□□ -1.8
RPA135YPR010C YOL098CQ12496 1037 aa3.81□□□□□ -1.8
RPA135YPR010C STI1P15705 589 aaKnown RBP RIP-Chip data3.8□□□□□ -1.8not detected
RPA135YPR010C RPS7AP26786 190 aaKnown RBP3.8□□□□□ -1.8
RPA135YPR010C MPE1P35728 441 aaKnown RBP3.8□□□□□ -1.8
RPA135YPR010C MRPL10P36520 322 aa3.8□□□□□ -1.8
RPA135YPR010C RRM3P38766 723 aa3.8□□□□□ -1.8
RPA135YPR010C RPN10P38886 268 aaKnown RBP3.8□□□□□ -1.8
RPA135YPR010C ICP55P40051 511 aa3.8□□□□□ -1.8
RPA135YPR010C EAF6P47128 113 aa3.8□□□□□ -1.8
RPA135YPR010C HST1P53685 503 aa3.8□□□□□ -1.8
RPA135YPR010C TRM44Q02648 567 aaKnown RBP3.8□□□□□ -1.8
RPA135YPR010C MTC5Q03897 1148 aa3.8□□□□□ -1.8
RPA135YPR010C HCR1Q05775 265 aaKnown RBP3.8□□□□□ -1.8
RPA135YPR010C OXR1Q08952 273 aa3.8□□□□□ -1.8
RPA135YPR010C YPL260WQ08977 551 aa3.8□□□□□ -1.8
RPA135YPR010C TY4B-HP0C2J7 1802 aa3.8□□□□□ -1.8
RPA135YPR010C TY4B-JP47024 1803 aa3.8□□□□□ -1.8
RPA135YPR010C TAF13P11747 167 aa3.8□□□□□ -1.8
RPA135YPR010C COQ1P18900 473 aa3.8□□□□□ -1.8
RPA135YPR010C PUS6P53294 404 aa3.8□□□□□ -1.8
RPA135YPR010C SDA1P53313 767 aaKnown RBP3.8□□□□□ -1.8
RPA135YPR010C CEF1Q03654 590 aaPredicted RBP3.8□□□□□ -1.8
RPA135YPR010C KEL3Q08979 651 aaPredicted RBP3.8□□□□□ -1.8
RPA135YPR010C ELG1Q12050 791 aa3.8□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 14.4 ms