RNA–Protein interactions for RNA: YPL174C

NIP100, Transcript of Large subunit of the dynactin complex, yeastyeast

Gene NIP100, Length 2,607 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NIP100YPL174C FUS1P11710 512 aa2.95□□□□□ -1.94
NIP100YPL174C LSB6P42951 607 aa2.95□□□□□ -1.94
NIP100YPL174C EMG1Q06287 252 aaKnown RBP2.95□□□□□ -1.94
NIP100YPL174C SLP1Q12232 587 aa2.95□□□□□ -1.94
NIP100YPL174C AKR1P39010 764 aa2.94□□□□□ -1.94
NIP100YPL174C CCT8P47079 568 aaKnown RBP2.94□□□□□ -1.94
NIP100YPL174C FET4P40988 552 aa2.94□□□□□ -1.94
NIP100YPL174C SPO71Q03868 1245 aa2.94□□□□□ -1.94
NIP100YPL174C MAE1P36013 669 aaKnown RBP2.93□□□□□ -1.94
NIP100YPL174C ERP5P38819 212 aa2.93□□□□□ -1.94
NIP100YPL174C INP51P40559 946 aaKnown RBP2.93□□□□□ -1.94
NIP100YPL174C RGD2P43556 714 aa2.93□□□□□ -1.94
NIP100YPL174C DSE4P53753 1117 aa2.93□□□□□ -1.94
NIP100YPL174C NSI1Q12457 570 aa2.93□□□□□ -1.94
NIP100YPL174C PAN5P38787 379 aa2.93□□□□□ -1.94
NIP100YPL174C LEM3P42838 414 aa2.93□□□□□ -1.94
NIP100YPL174C YPL034WQ03083 165 aa2.93□□□□□ -1.94
NIP100YPL174C YCK2P23292 546 aaKnown RBP2.92□□□□□ -1.94
NIP100YPL174C ACF4P47129 309 aa2.92□□□□□ -1.94
NIP100YPL174C GUP1P53154 560 aa2.92□□□□□ -1.94
NIP100YPL174C BUD9P53226 547 aa2.92□□□□□ -1.94
NIP100YPL174C FAR11P53917 953 aa2.92□□□□□ -1.94
NIP100YPL174C TRS120Q04183 1289 aa2.92□□□□□ -1.94
NIP100YPL174C PYC2P32327 1180 aaKnown RBP2.92□□□□□ -1.94
NIP100YPL174C SLD2P34252 453 aa2.92□□□□□ -1.94
NIP100YPL174C APC11Q12157 165 aa2.92□□□□□ -1.94
NIP100YPL174C YLL054CQ12244 843 aa2.92□□□□□ -1.94
NIP100YPL174C AMN1P38285 549 aaPredicted RBP2.91□□□□□ -1.94
NIP100YPL174C SKN7P38889 622 aa2.91□□□□□ -1.94
NIP100YPL174C BSC2Q05611 235 aa2.91□□□□□ -1.94
NIP100YPL174C CIC1P38779 376 aaKnown RBP2.91□□□□□ -1.94
NIP100YPL174C YJR124CP47159 448 aa2.91□□□□□ -1.94
NIP100YPL174C SAM37P50110 327 aa2.91□□□□□ -1.94
NIP100YPL174C ALO1P54783 526 aaKnown RBP2.91□□□□□ -1.94
NIP100YPL174C NOC3Q07896 663 aaPredicted RBP2.91□□□□□ -1.94
NIP100YPL174C ELG1Q12050 791 aa2.91□□□□□ -1.94
NIP100YPL174C LIP5P32875 414 aa2.9□□□□□ -1.94
NIP100YPL174C KAE1P36132 386 aa2.9□□□□□ -1.94
NIP100YPL174C OMA1P36163 345 aa2.9□□□□□ -1.94
NIP100YPL174C MON1P53129 644 aa2.9□□□□□ -1.94
NIP100YPL174C YNL011CP53980 444 aa2.9□□□□□ -1.94
NIP100YPL174C ALD3P54114 506 aa2.9□□□□□ -1.94
NIP100YPL174C SOG2Q08817 791 aa2.9□□□□□ -1.94
NIP100YPL174C SFA1P32771 386 aa2.9□□□□□ -1.95
NIP100YPL174C TY4B-PA0A0B7P3V8 1104 aa2.89□□□□□ -1.95
NIP100YPL174C AI3P03877 415 aa2.89□□□□□ -1.95
NIP100YPL174C YHL050CP38721 697 aa2.89□□□□□ -1.95
NIP100YPL174C YHR219WP38900 624 aa2.89□□□□□ -1.95
NIP100YPL174C STM1P39015 273 aaKnown RBP2.89□□□□□ -1.95
NIP100YPL174C ARI1P53111 347 aaKnown RBP2.89□□□□□ -1.95
NIP100YPL174C BIO5P53744 561 aaKnown RBP2.89□□□□□ -1.95
NIP100YPL174C TY4A-HQ6Q5P6 413 aa2.89□□□□□ -1.95
NIP100YPL174C CHS2P14180 963 aa2.89□□□□□ -1.95
NIP100YPL174C MCM5P29496 775 aaKnown RBP2.89□□□□□ -1.95
NIP100YPL174C SQT1P35184 431 aa2.89□□□□□ -1.95
NIP100YPL174C KIP3P53086 805 aaKnown RBP2.89□□□□□ -1.95
NIP100YPL174C INP54Q08227 384 aaKnown RBP2.89□□□□□ -1.95
NIP100YPL174C AVO1Q08236 1176 aa2.89□□□□□ -1.95
NIP100YPL174C OXR1Q08952 273 aa2.89□□□□□ -1.95
NIP100YPL174C YKL077WP36081 392 aa2.89□□□□□ -1.95
NIP100YPL174C SHU2P38957 223 aa2.89□□□□□ -1.95
NIP100YPL174C RSM26P47141 266 aa2.89□□□□□ -1.95
NIP100YPL174C HAS1Q03532 505 aaKnown RBP2.89□□□□□ -1.95
NIP100YPL174C NUT2Q06213 157 aa2.89□□□□□ -1.95
NIP100YPL174C GLO4Q12320 285 aa2.89□□□□□ -1.95
NIP100YPL174C GCD6P32501 712 aaKnown RBP2.88□□□□□ -1.95
NIP100YPL174C TFA2P36145 328 aa2.88□□□□□ -1.95
NIP100YPL174C NRD1P53617 575 aaKnown RBP RIP-Chip data2.88□□□□□ -1.95not detected
NIP100YPL174C CDC55Q00362 526 aa2.88□□□□□ -1.95
NIP100YPL174C PMT7Q06644 662 aa2.88□□□□□ -1.95
NIP100YPL174C NAM7P30771 971 aaKnown RBP2.88□□□□□ -1.95
NIP100YPL174C YGR130CP53278 816 aa2.88□□□□□ -1.95
NIP100YPL174C YOR223WQ12015 292 aa2.88□□□□□ -1.95
NIP100YPL174C SEC20P28791 383 aa2.87□□□□□ -1.95
NIP100YPL174C SSF1P38789 453 aaPredicted RBP2.87□□□□□ -1.95
NIP100YPL174C MED7Q08278 222 aa2.87□□□□□ -1.95
NIP100YPL174C REC8Q12188 680 aa2.87□□□□□ -1.95
NIP100YPL174C TY1A-NL1Q12391 440 aaKnown RBP2.87□□□□□ -1.95
NIP100YPL174C KAR2P16474 682 aaKnown RBP2.87□□□□□ -1.95
NIP100YPL174C TOS1P38288 455 aa2.87□□□□□ -1.95
NIP100YPL174C MDJ2P42834 146 aa2.87□□□□□ -1.95
NIP100YPL174C YNR065CP53751 1116 aa2.87□□□□□ -1.95
NIP100YPL174C DOT1Q04089 582 aaKnown RBP2.87□□□□□ -1.95
NIP100YPL174C GIC2Q06648 383 aa2.87□□□□□ -1.95
NIP100YPL174C ERS1P17261 260 aa2.86□□□□□ -1.95
NIP100YPL174C SAF1P38352 637 aa2.86□□□□□ -1.95
NIP100YPL174C FRT1Q99332 602 aa2.86□□□□□ -1.95
NIP100YPL174C KTR2P33550 425 aa2.86□□□□□ -1.95
NIP100YPL174C REI1P38344 393 aaPredicted RBP2.86□□□□□ -1.95
NIP100YPL174C RSC4Q02206 625 aa2.86□□□□□ -1.95
NIP100YPL174C PUF3Q07807 879 aaKnown RBP RIP-Chip data2.86□□□□□ -1.95not detected
NIP100YPL174C PRE9P23638 258 aaKnown RBP2.85□□□□□ -1.95
NIP100YPL174C MTR4P47047 1073 aaKnown RBP2.85□□□□□ -1.95
NIP100YPL174C UTP22P53254 1237 aaPredicted RBP2.85□□□□□ -1.95
NIP100YPL174C PEX13P80667 386 aa2.85□□□□□ -1.95
NIP100YPL174C DAL4Q04895 635 aa2.85□□□□□ -1.95
NIP100YPL174C ALG6Q12001 544 aaKnown RBP2.85□□□□□ -1.95
NIP100YPL174C CYC7P00045 113 aa2.85□□□□□ -1.95
NIP100YPL174C FLP1P03870 423 aa2.85□□□□□ -1.95
NIP100YPL174C NPR1P22211 790 aa2.85□□□□□ -1.95
Retrieved 100 of 5,963 RNA–protein pairs in 13.3 ms