RNA–Protein interactions for RNA: YPL045W

VPS16, Transcript of Subunit of the HOPS and the CORVET complexes, yeastyeast

Gene VPS16, Length 2,397 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS16YPL045W MCM5P29496 775 aaKnown RBP3.02□□□□□ -1.93
VPS16YPL045W MRT4P33201 236 aaKnown RBP3.02□□□□□ -1.93
VPS16YPL045W QDR2P40474 542 aa3.02□□□□□ -1.93
VPS16YPL045W BDP1P46678 594 aa3.02□□□□□ -1.93
VPS16YPL045W FLC1Q08967 793 aa3.02□□□□□ -1.93
VPS16YPL045W GCR1P07261 785 aa3.02□□□□□ -1.93
VPS16YPL045W MLF3P32047 452 aa3.02□□□□□ -1.93
VPS16YPL045W UBP12P39538 1254 aa3.02□□□□□ -1.93
VPS16YPL045W PIC2P40035 300 aa3.02□□□□□ -1.93
VPS16YPL045W MSH4P40965 878 aaPredicted RBP3.02□□□□□ -1.93
VPS16YPL045W CTR9P89105 1077 aa3.02□□□□□ -1.93
VPS16YPL045W ULP1Q02724 621 aa3.02□□□□□ -1.93
VPS16YPL045W ADI1Q03677 179 aa3.02□□□□□ -1.93
VPS16YPL045W GYP1Q08484 637 aa3.02□□□□□ -1.93
VPS16YPL045W YLR125WQ12138 136 aa3.02□□□□□ -1.93
VPS16YPL045W STE5P32917 917 aa3.01□□□□□ -1.93
VPS16YPL045W YJR115WP47152 169 aa3.01□□□□□ -1.93
VPS16YPL045W RTT10Q08924 1013 aa3.01□□□□□ -1.93
VPS16YPL045W COBP00163 385 aa3.01□□□□□ -1.93
VPS16YPL045W KAR2P16474 682 aaKnown RBP3.01□□□□□ -1.93
VPS16YPL045W RSP5P39940 809 aaKnown RBP3.01□□□□□ -1.93
VPS16YPL045W SUB1P54000 292 aaKnown RBP3.01□□□□□ -1.93
VPS16YPL045W DNM1P54861 757 aa3.01□□□□□ -1.93
VPS16YPL045W FRK1Q03002 865 aaPredicted RBP3.01□□□□□ -1.93
VPS16YPL045W YOL057WQ08225 711 aa3.01□□□□□ -1.93
VPS16YPL045W FAL1Q12099 399 aaKnown RBP3.01□□□□□ -1.93
VPS16YPL045W THI4P32318 326 aa3□□□□□ -1.93
VPS16YPL045W ISW1P38144 1129 aa3□□□□□ -1.93
VPS16YPL045W DLD3P39976 496 aaKnown RBP3□□□□□ -1.93
VPS16YPL045W YEN1P40028 759 aa3□□□□□ -1.93
VPS16YPL045W MON1P53129 644 aa3□□□□□ -1.93
VPS16YPL045W EEB1Q02891 456 aa3□□□□□ -1.93
VPS16YPL045W ERR1P0CX10 437 aa3□□□□□ -1.93
VPS16YPL045W ERR2P0CX11 437 aa3□□□□□ -1.93
VPS16YPL045W BAS1P22035 811 aa3□□□□□ -1.93
VPS16YPL045W NAB2P32505 525 aaKnown RBP RIP-Chip data3□□□□□ -1.93not detected
VPS16YPL045W DUR3P33413 735 aa3□□□□□ -1.93
VPS16YPL045W GIP1P38229 639 aa3□□□□□ -1.93
VPS16YPL045W YBR184WP38299 523 aa3□□□□□ -1.93
VPS16YPL045W BSD2P38356 321 aa3□□□□□ -1.93
VPS16YPL045W NUT1P53114 1132 aa3□□□□□ -1.93
VPS16YPL045W YGR125WP53273 1036 aa3□□□□□ -1.93
VPS16YPL045W NOP14Q99207 810 aaKnown RBP3□□□□□ -1.93
VPS16YPL045W MON2P48563 1636 aaPredicted RBP2.99□□□□□ -1.93
VPS16YPL045W CAN1P04817 590 aa2.99□□□□□ -1.93
VPS16YPL045W RPS31P05759 152 aaKnown RBP2.99□□□□□ -1.93
VPS16YPL045W RPC31P17890 251 aa2.99□□□□□ -1.93
VPS16YPL045W MRF1P30775 413 aaPredicted RBP2.99□□□□□ -1.93
VPS16YPL045W KAP122P32767 1081 aa2.99□□□□□ -1.93
VPS16YPL045W CRP1P38845 465 aaKnown RBP2.99□□□□□ -1.93
VPS16YPL045W RGA1P39083 1007 aa2.99□□□□□ -1.93
VPS16YPL045W RVS167P39743 482 aaKnown RBP2.99□□□□□ -1.93
VPS16YPL045W TPM2P40414 161 aa2.99□□□□□ -1.93
VPS16YPL045W ALA1P40825 983 aaKnown RBP2.99□□□□□ -1.93
VPS16YPL045W JSN1P47135 1091 aaKnown RBP RIP-Chip data2.99□□□□□ -1.93 RIP-Chip
VPS16YPL045W SPO75Q07798 868 aa2.99□□□□□ -1.93
VPS16YPL045W TMA46Q12000 345 aaKnown RBP2.99□□□□□ -1.93
VPS16YPL045W SDH2P21801 266 aa2.98□□□□□ -1.93
VPS16YPL045W SRM1P21827 482 aa2.98□□□□□ -1.93
VPS16YPL045W RPL8BP29453 256 aaKnown RBP2.98□□□□□ -1.93
VPS16YPL045W PRE3P38624 215 aa2.98□□□□□ -1.93
VPS16YPL045W SSN3P39073 555 aa2.98□□□□□ -1.93
VPS16YPL045W EMG1Q06287 252 aaKnown RBP2.98□□□□□ -1.93
VPS16YPL045W MRL1Q06815 381 aa2.98□□□□□ -1.93
VPS16YPL045W YBR287WP38355 427 aa2.98□□□□□ -1.93
VPS16YPL045W AIM46P38885 310 aa2.98□□□□□ -1.93
VPS16YPL045W PMC1P38929 1173 aaPredicted RBP2.98□□□□□ -1.93
VPS16YPL045W XKS1P42826 600 aa2.98□□□□□ -1.93
VPS16YPL045W JJJ2P46997 583 aa2.98□□□□□ -1.93
VPS16YPL045W GNP1P48813 663 aa2.98□□□□□ -1.93
VPS16YPL045W ZDS1P50111 915 aaKnown RBP2.98□□□□□ -1.93
VPS16YPL045W YNR029CP53729 429 aaKnown RBP2.98□□□□□ -1.93
VPS16YPL045W KRE33P53914 1056 aaKnown RBP2.98□□□□□ -1.93
VPS16YPL045W VPS72Q03388 795 aa2.98□□□□□ -1.93
VPS16YPL045W MSH6Q03834 1242 aa2.98□□□□□ -1.93
VPS16YPL045W YOR296WQ08748 1289 aa2.98□□□□□ -1.93
VPS16YPL045W OSH2Q12451 1283 aa2.98□□□□□ -1.93
VPS16YPL045W SSD1P24276 1250 aaKnown RBP RIP-Chip data2.97□□□□□ -1.93not detected
VPS16YPL045W SHM1P37292 490 aaPredicted RBP2.97□□□□□ -1.93
VPS16YPL045W SEA4P38164 1038 aa2.97□□□□□ -1.93
VPS16YPL045W ECM2P38241 364 aaKnown RBP2.97□□□□□ -1.93
VPS16YPL045W ENP1P38333 483 aaKnown RBP2.97□□□□□ -1.93
VPS16YPL045W GGA2P38817 585 aaKnown RBP2.97□□□□□ -1.93
VPS16YPL045W NOP2P40991 618 aaKnown RBP2.97□□□□□ -1.93
VPS16YPL045W BUD21Q08492 214 aaPredicted RBP2.97□□□□□ -1.93
VPS16YPL045W RPL8AP17076 256 aaKnown RBP2.97□□□□□ -1.93
VPS16YPL045W GAL11P19659 1081 aa2.97□□□□□ -1.93
VPS16YPL045W HSP60P19882 572 aaKnown RBP2.97□□□□□ -1.93
VPS16YPL045W AGP1P25376 633 aa2.97□□□□□ -1.93
VPS16YPL045W PYC2P32327 1180 aaKnown RBP2.97□□□□□ -1.93
VPS16YPL045W IRR1P40541 1150 aa2.97□□□□□ -1.93
VPS16YPL045W PFD1P46988 109 aa2.97□□□□□ -1.93
VPS16YPL045W SHE9Q04172 456 aa2.97□□□□□ -1.93
VPS16YPL045W ESC2Q06340 456 aa2.97□□□□□ -1.93
VPS16YPL045W ADR1P07248 1323 aa2.97□□□□□ -1.93
VPS16YPL045W CIT1P00890 479 aa2.96□□□□□ -1.94
VPS16YPL045W TRP2P00899 507 aaKnown RBP2.96□□□□□ -1.94
VPS16YPL045W GRX7P38068 203 aa2.96□□□□□ -1.94
VPS16YPL045W SAP155P43612 1002 aa2.96□□□□□ -1.94
VPS16YPL045W RSM26P47141 266 aa2.96□□□□□ -1.94
Retrieved 100 of 5,963 RNA–protein pairs in 34 ms