RNA–Protein interactions for RNA: YOR227W

HER1, Transcript of Protein of unknown function, yeastyeast

Gene HER1, Length 3,741 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HER1YOR227W MSB3P48566 633 aaPredicted RBP2.41□□□□□ -2.02
HER1YOR227W SAM3Q08986 587 aa2.41□□□□□ -2.02
HER1YOR227W DAL5P15365 543 aa2.41□□□□□ -2.02
HER1YOR227W YKL069WP36088 180 aa2.41□□□□□ -2.02
HER1YOR227W NUP82P40368 713 aa2.41□□□□□ -2.02
HER1YOR227W HOS4P40480 1083 aa2.41□□□□□ -2.02
HER1YOR227W YJL049WP47048 450 aa2.41□□□□□ -2.02
HER1YOR227W NAB6Q03735 1134 aaKnown RBP RIP-Chip data2.41□□□□□ -2.02not detected
HER1YOR227W ECM16Q04217 1267 aaKnown RBP2.41□□□□□ -2.02
HER1YOR227W SSK22P25390 1331 aaPredicted RBP2.41□□□□□ -2.02
HER1YOR227W FKS1P38631 1876 aaKnown RBP2.41□□□□□ -2.02
HER1YOR227W SRS2P12954 1174 aa2.41□□□□□ -2.02
HER1YOR227W CYC8P14922 966 aa2.41□□□□□ -2.02
HER1YOR227W RPT1P33299 467 aaKnown RBP2.41□□□□□ -2.02
HER1YOR227W GDE1Q02979 1223 aa2.41□□□□□ -2.02
HER1YOR227W ESF1Q06344 628 aaKnown RBP2.41□□□□□ -2.02
HER1YOR227W YOL036WQ08206 761 aa2.41□□□□□ -2.02
HER1YOR227W APC11Q12157 165 aa2.41□□□□□ -2.02
HER1YOR227W NUP145P49687 1317 aa2.4□□□□□ -2.02
HER1YOR227W RIF1P29539 1916 aa2.4□□□□□ -2.02
HER1YOR227W THS1P04801 734 aaKnown RBP2.4□□□□□ -2.02
HER1YOR227W PHO87P25360 923 aa2.4□□□□□ -2.02
HER1YOR227W PWP2P25635 923 aaKnown RBP2.4□□□□□ -2.02
HER1YOR227W RAD27P26793 382 aa2.4□□□□□ -2.02
HER1YOR227W SLI15P38283 698 aa2.4□□□□□ -2.02
HER1YOR227W MGE1P38523 228 aa2.4□□□□□ -2.02
HER1YOR227W KIC1P38692 1080 aa2.4□□□□□ -2.02
HER1YOR227W TUB4P53378 473 aa2.4□□□□□ -2.02
HER1YOR227W CDC53Q12018 815 aaKnown RBP2.4□□□□□ -2.02
HER1YOR227W GRE2Q12068 342 aaKnown RBP2.4□□□□□ -2.02
HER1YOR227W TRM1P15565 570 aaKnown RBP2.4□□□□□ -2.03
HER1YOR227W TRX2P22803 104 aaKnown RBP2.4□□□□□ -2.03
HER1YOR227W STE5P32917 917 aa2.4□□□□□ -2.03
HER1YOR227W ERF2Q06551 359 aa2.4□□□□□ -2.03
HER1YOR227W NKP1Q12493 238 aa2.4□□□□□ -2.03
HER1YOR227W MYO1P08964 1928 aa2.4□□□□□ -2.03
HER1YOR227W PRP5P21372 849 aaPredicted RBP2.4□□□□□ -2.03
HER1YOR227W RPS26AP39938 119 aaKnown RBP2.4□□□□□ -2.03
HER1YOR227W RPS26BP39939 119 aaKnown RBP2.4□□□□□ -2.03
HER1YOR227W YJR120WP47157 116 aa2.4□□□□□ -2.03
HER1YOR227W ATH1P48016 1211 aa2.4□□□□□ -2.03
HER1YOR227W TRS120Q04183 1289 aa2.4□□□□□ -2.03
HER1YOR227W ERR1P0CX10 437 aa2.39□□□□□ -2.03
HER1YOR227W ERR2P0CX11 437 aa2.39□□□□□ -2.03
HER1YOR227W NSR1P27476 414 aaKnown RBP RIP-Chip data2.39□□□□□ -2.03not detected
HER1YOR227W ERP2P39704 215 aa2.39□□□□□ -2.03
HER1YOR227W YGL081WP53156 320 aa2.39□□□□□ -2.03
HER1YOR227W YGR053CP53234 283 aa2.39□□□□□ -2.03
HER1YOR227W COG4Q06096 861 aa2.39□□□□□ -2.03
HER1YOR227W FRA1Q07825 749 aa2.39□□□□□ -2.03
HER1YOR227W INP54Q08227 384 aaKnown RBP2.39□□□□□ -2.03
HER1YOR227W HXK1P04806 485 aaKnown RBP2.39□□□□□ -2.03
HER1YOR227W HAL5P38970 855 aaKnown RBP2.39□□□□□ -2.03
HER1YOR227W MAL11P53048 616 aa2.39□□□□□ -2.03
HER1YOR227W GPG1P53130 126 aa2.39□□□□□ -2.03
HER1YOR227W AGE1Q04412 482 aa2.39□□□□□ -2.03
HER1YOR227W TMA64Q04600 565 aaKnown RBP2.39□□□□□ -2.03
HER1YOR227W MET6P05694 767 aaKnown RBP2.39□□□□□ -2.03
HER1YOR227W MPH3P0CE00 602 aa2.39□□□□□ -2.03
HER1YOR227W FAA4P47912 694 aaKnown RBP2.39□□□□□ -2.03
HER1YOR227W RCM1P53972 490 aa2.39□□□□□ -2.03
HER1YOR227W KIN4Q01919 800 aa2.39□□□□□ -2.03
HER1YOR227W RMD1Q03441 430 aa2.39□□□□□ -2.03
HER1YOR227W CSC1Q06538 782 aa2.39□□□□□ -2.03
HER1YOR227W CDC73Q06697 393 aa2.39□□□□□ -2.03
HER1YOR227W MPH2P0CD99 609 aa2.38□□□□□ -2.03
HER1YOR227W KAR1P11927 433 aa2.38□□□□□ -2.03
HER1YOR227W RPL8AP17076 256 aaKnown RBP2.38□□□□□ -2.03
HER1YOR227W ERT1P38140 529 aa2.38□□□□□ -2.03
HER1YOR227W FAA3P39002 694 aa2.38□□□□□ -2.03
HER1YOR227W FAF1P40546 346 aaPredicted RBP2.38□□□□□ -2.03
HER1YOR227W BUB1P41695 1021 aaKnown RBP RIP-Chip data2.38□□□□□ -2.03not detected
HER1YOR227W YPP1P46951 817 aa2.38□□□□□ -2.03
HER1YOR227W TAF8Q03750 510 aa2.38□□□□□ -2.03
HER1YOR227W YRR1Q12172 810 aa2.38□□□□□ -2.03
HER1YOR227W YGR161W-CQ3E744 92 aa2.38□□□□□ -2.03
HER1YOR227W AI4P03878 556 aa2.38□□□□□ -2.03
HER1YOR227W SLY41P22215 453 aa2.38□□□□□ -2.03
HER1YOR227W NOP2P40991 618 aaKnown RBP2.38□□□□□ -2.03
HER1YOR227W YGR122WP53272 402 aa2.38□□□□□ -2.03
HER1YOR227W CTF4Q01454 927 aa2.38□□□□□ -2.03
HER1YOR227W DPS1P04802 557 aaKnown RBP2.38□□□□□ -2.03
HER1YOR227W RAD4P14736 754 aa2.38□□□□□ -2.03
HER1YOR227W RPB10P22139 70 aa2.38□□□□□ -2.03
HER1YOR227W SPF1P39986 1215 aaKnown RBP2.38□□□□□ -2.03
HER1YOR227W RPS0BP46654 252 aaKnown RBP2.38□□□□□ -2.03
HER1YOR227W YGR021WP53212 290 aa2.38□□□□□ -2.03
HER1YOR227W PUN1Q06991 263 aa2.38□□□□□ -2.03
HER1YOR227W WSC3Q12215 556 aa2.38□□□□□ -2.03
HER1YOR227W SNU66Q12420 587 aaPredicted RBP2.38□□□□□ -2.03
HER1YOR227W FUR4P05316 633 aaKnown RBP2.37□□□□□ -2.03
HER1YOR227W PUF4P25339 888 aaKnown RBP RIP-Chip data2.37□□□□□ -2.03not detected
HER1YOR227W RKM3P38222 552 aa2.37□□□□□ -2.03
HER1YOR227W HIF1Q12373 385 aa2.37□□□□□ -2.03
HER1YOR227W TSC13Q99190 310 aa2.37□□□□□ -2.03
HER1YOR227W NOP14Q99207 810 aaKnown RBP2.37□□□□□ -2.03
HER1YOR227W CIT1P00890 479 aa2.37□□□□□ -2.03
HER1YOR227W SNF7P39929 240 aaKnown RBP2.37□□□□□ -2.03
HER1YOR227W FIG4P42837 879 aa2.37□□□□□ -2.03
HER1YOR227W RRP46P53256 223 aaPredicted RBP2.37□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 38.3 ms