RNA–Protein interactions for RNA: YOR216C

RUD3, Transcript of Golgi matrix protein, yeast

Gene RUD3, Length 1,455 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RUD3	YOR216C	BIO5	P53744	561 aa	Known RBP	5.85	□□□□□ -1.47
RUD3	YOR216C	TFA2	P36145	328 aa		5.84	□□□□□ -1.47
RUD3	YOR216C	NCE103	P53615	221 aa		5.84	□□□□□ -1.47
RUD3	YOR216C	POL5	P39985	1022 aa	Known RBP	5.83	□□□□□ -1.48
RUD3	YOR216C	PUP1	P25043	261 aa		5.83	□□□□□ -1.48
RUD3	YOR216C	CPS1	P27614	576 aa		5.83	□□□□□ -1.48
RUD3	YOR216C	ALD3	P54114	506 aa		5.83	□□□□□ -1.48
RUD3	YOR216C	PUN1	Q06991	263 aa		5.83	□□□□□ -1.48
RUD3	YOR216C	MAE1	P36013	669 aa	Known RBP	5.81	□□□□□ -1.48
RUD3	YOR216C	SEA4	P38164	1038 aa		5.81	□□□□□ -1.48
RUD3	YOR216C	NIT1	P40447	199 aa		5.81	□□□□□ -1.48
RUD3	YOR216C	PUF6	Q04373	656 aa	Known RBP	5.81	□□□□□ -1.48
RUD3	YOR216C	RNQ1	P25367	405 aa		5.8	□□□□□ -1.48
RUD3	YOR216C	AIM46	P38885	310 aa		5.79	□□□□□ -1.48
RUD3	YOR216C	HXT8	P40886	569 aa		5.79	□□□□□ -1.48
RUD3	YOR216C	FUS1	P11710	512 aa		5.78	□□□□□ -1.48
RUD3	YOR216C	SRS2	P12954	1174 aa		5.78	□□□□□ -1.48
RUD3	YOR216C	YBR287W	P38355	427 aa		5.78	□□□□□ -1.48
RUD3	YOR216C	RGD2	P43556	714 aa		5.78	□□□□□ -1.48
RUD3	YOR216C	ECL1	P48235	211 aa		5.78	□□□□□ -1.48
RUD3	YOR216C	SPO71	Q03868	1245 aa		5.78	□□□□□ -1.48
RUD3	YOR216C	KTR2	P33550	425 aa		5.77	□□□□□ -1.49
RUD3	YOR216C	SEG2	P34250	1132 aa		5.77	□□□□□ -1.49
RUD3	YOR216C	FIR1	P40020	876 aa		5.77	□□□□□ -1.49
RUD3	YOR216C	ELG1	Q12050	791 aa		5.77	□□□□□ -1.49
RUD3	YOR216C	LRG1	P35688	1017 aa		5.77	□□□□□ -1.49
RUD3	YOR216C	YCR015C	P25616	317 aa		5.76	□□□□□ -1.49
RUD3	YOR216C	BOI1	P38041	980 aa	Known RBP	5.76	□□□□□ -1.49
RUD3	YOR216C	CWC15	Q03772	175 aa	Known RBP	5.76	□□□□□ -1.49
RUD3	YOR216C	HVG1	P0CE11	249 aa		5.75	□□□□□ -1.49
RUD3	YOR216C	ERS1	P17261	260 aa		5.75	□□□□□ -1.49
RUD3	YOR216C	SDH1	Q00711	640 aa		5.75	□□□□□ -1.49
RUD3	YOR216C	GIC2	Q06648	383 aa		5.75	□□□□□ -1.49
RUD3	YOR216C	NEO1	P40527	1151 aa		5.74	□□□□□ -1.49
RUD3	YOR216C	KIP3	P53086	805 aa	Known RBP	5.74	□□□□□ -1.49
RUD3	YOR216C	YNR065C	P53751	1116 aa		5.74	□□□□□ -1.49
RUD3	YOR216C	GCD1	P09032	578 aa	Predicted RBP	5.73	□□□□□ -1.49
RUD3	YOR216C	YJR124C	P47159	448 aa		5.73	□□□□□ -1.49
RUD3	YOR216C	SUT1	P53032	299 aa	Known RBP	5.73	□□□□□ -1.49
RUD3	YOR216C	DFG16	Q99234	619 aa		5.73	□□□□□ -1.49
RUD3	YOR216C	NTA1	P40354	457 aa		5.72	□□□□□ -1.49
RUD3	YOR216C	HAS1	Q03532	505 aa	Known RBP	5.72	□□□□□ -1.49
RUD3	YOR216C	YML083C	Q04526	418 aa		5.72	□□□□□ -1.49
RUD3	YOR216C	APC11	Q12157	165 aa		5.72	□□□□□ -1.49
RUD3	YOR216C	POL12	P38121	705 aa	Predicted RBP	5.71	□□□□□ -1.49
RUD3	YOR216C	DMA2	P53924	522 aa		5.71	□□□□□ -1.49
RUD3	YOR216C	GLO4	Q12320	285 aa		5.71	□□□□□ -1.5
RUD3	YOR216C	TIF6	Q12522	245 aa	Known RBP	5.71	□□□□□ -1.5
RUD3	YOR216C	LEO1	P38439	464 aa		5.7	□□□□□ -1.5
RUD3	YOR216C	PNP1	Q05788	311 aa		5.7	□□□□□ -1.5
RUD3	YOR216C	RPB10	P22139	70 aa		5.69	□□□□□ -1.5
RUD3	YOR216C	RAD55	P38953	406 aa		5.69	□□□□□ -1.5
RUD3	YOR216C	PRP43	P53131	767 aa	Known RBP	5.69	□□□□□ -1.5
RUD3	YOR216C	RRN6	P32786	894 aa		5.68	□□□□□ -1.5
RUD3	YOR216C	TSA1	P34760	196 aa	Known RBP	5.68	□□□□□ -1.5
RUD3	YOR216C	FAR11	P53917	953 aa		5.68	□□□□□ -1.5
RUD3	YOR216C	IRS4	P36115	615 aa	Known RBP	5.67	□□□□□ -1.5
RUD3	YOR216C	PSY2	P40164	858 aa		5.67	□□□□□ -1.5
RUD3	YOR216C	MMM1	P41800	426 aa		5.67	□□□□□ -1.5
RUD3	YOR216C	ESC8	Q08119	714 aa		5.67	□□□□□ -1.5
RUD3	YOR216C	NOB1	Q08444	459 aa	Known RBP	5.67	□□□□□ -1.5
RUD3	YOR216C	PYC2	P32327	1180 aa	Known RBP	5.66	□□□□□ -1.5
RUD3	YOR216C	YKL222C	P35995	705 aa		5.66	□□□□□ -1.5
RUD3	YOR216C	CIT3	P43635	486 aa		5.66	□□□□□ -1.5
RUD3	YOR216C	CDA2	Q06703	312 aa		5.66	□□□□□ -1.5
RUD3	YOR216C	YOR223W	Q12015	292 aa		5.66	□□□□□ -1.5
RUD3	YOR216C	YHL008C	P38750	627 aa		5.65	□□□□□ -1.5
RUD3	YOR216C	FET4	P40988	552 aa		5.65	□□□□□ -1.5
RUD3	YOR216C	YOR059C	Q08448	450 aa	Known RBP	5.65	□□□□□ -1.5
RUD3	YOR216C	LSO1	Q3E827	93 aa		5.65	□□□□□ -1.5
RUD3	YOR216C	GAS1	P22146	559 aa	Known RBP	5.64	□□□□□ -1.51
RUD3	YOR216C	WHI3	P34761	661 aa	Known RBP	5.64	□□□□□ -1.51
RUD3	YOR216C	NSI1	Q12457	570 aa		5.64	□□□□□ -1.51
RUD3	YOR216C	SMC1	P32908	1225 aa		5.64	□□□□□ -1.51
RUD3	YOR216C	GPT2	P36148	743 aa		5.64	□□□□□ -1.51
RUD3	YOR216C	ORC3	P54790	616 aa		5.64	□□□□□ -1.51
RUD3	YOR216C	YMR074C	Q04773	145 aa		5.63	□□□□□ -1.51
RUD3	YOR216C	THI80	P35202	319 aa		5.62	□□□□□ -1.51
RUD3	YOR216C	TAF1	P46677	1066 aa		5.62	□□□□□ -1.51
RUD3	YOR216C	HSP78	P33416	811 aa		5.61	□□□□□ -1.51
RUD3	YOR216C	OYE3	P41816	400 aa	Predicted RBP	5.61	□□□□□ -1.51
RUD3	YOR216C	RCM1	P53972	490 aa		5.61	□□□□□ -1.51
RUD3	YOR216C	CTR9	P89105	1077 aa		5.61	□□□□□ -1.51
RUD3	YOR216C	SSA4	P22202	642 aa	Known RBP	5.6	□□□□□ -1.51
RUD3	YOR216C	DOT1	Q04089	582 aa	Known RBP	5.59	□□□□□ -1.51
RUD3	YOR216C	YLL054C	Q12244	843 aa		5.59	□□□□□ -1.51
RUD3	YOR216C	BOL3	P39724	118 aa		5.58	□□□□□ -1.52
RUD3	YOR216C	GIP4	P39732	760 aa		5.58	□□□□□ -1.52
RUD3	YOR216C	GCV1	P48015	400 aa		5.58	□□□□□ -1.52
RUD3	YOR216C	COB	P00163	385 aa		5.57	□□□□□ -1.52
RUD3	YOR216C	FUR4	P05316	633 aa	Known RBP	5.57	□□□□□ -1.52
RUD3	YOR216C	HDA2	Q06629	674 aa		5.57	□□□□□ -1.52
RUD3	YOR216C	YIG1	Q08956	461 aa		5.57	□□□□□ -1.52
RUD3	YOR216C	PRP6	P19735	899 aa	Predicted RBP	5.56	□□□□□ -1.52
RUD3	YOR216C	GIS1	Q03833	894 aa		5.56	□□□□□ -1.52
RUD3	YOR216C	RIM11	P38615	370 aa		5.55	□□□□□ -1.52
RUD3	YOR216C	RPS4A	P0CX35	261 aa	Known RBP	5.54	□□□□□ -1.52
RUD3	YOR216C	RPS4B	P0CX36	261 aa	Known RBP	5.54	□□□□□ -1.52
RUD3	YOR216C	ADP1	P25371	1049 aa		5.54	□□□□□ -1.52
RUD3	YOR216C	DUR3	P33413	735 aa		5.54	□□□□□ -1.52

Retrieved 100 of 5,963 RNA–protein pairs in 38.5 ms