RNA–Protein interactions for RNA: YOR124C

UBP2, Transcript of Ubiquitin-specific protease, yeastyeast

Gene UBP2, Length 3,819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP2YOR124C MRPS28P21771 286 aa2.36□□□□□ -2.03
UBP2YOR124C IES2P40154 320 aa2.36□□□□□ -2.03
UBP2YOR124C HUL4P40985 892 aa2.36□□□□□ -2.03
UBP2YOR124C MDJ2P42834 146 aa2.36□□□□□ -2.03
UBP2YOR124C SET4P42948 560 aa2.36□□□□□ -2.03
UBP2YOR124C CSI1Q04368 295 aa2.36□□□□□ -2.03
UBP2YOR124C POB3Q04636 552 aaKnown RBP2.36□□□□□ -2.03
UBP2YOR124C DPL1Q05567 589 aa2.36□□□□□ -2.03
UBP2YOR124C AIR2Q12476 344 aaKnown RBP2.36□□□□□ -2.03
UBP2YOR124C LAM4P38800 1345 aa2.36□□□□□ -2.03
UBP2YOR124C ADE3P07245 946 aaKnown RBP2.36□□□□□ -2.03
UBP2YOR124C MATALPHA2P0CY08 210 aa2.36□□□□□ -2.03
UBP2YOR124C HMLALPHA2P0CY09 210 aa2.36□□□□□ -2.03
UBP2YOR124C PRP16P15938 1071 aaPredicted RBP2.36□□□□□ -2.03
UBP2YOR124C GSY2P27472 705 aa2.36□□□□□ -2.03
UBP2YOR124C SPT5P27692 1063 aaKnown RBP2.36□□□□□ -2.03
UBP2YOR124C ZUO1P32527 433 aaKnown RBP2.36□□□□□ -2.03
UBP2YOR124C NTH2P35172 780 aa2.36□□□□□ -2.03
UBP2YOR124C RGD1P38339 666 aa2.36□□□□□ -2.03
UBP2YOR124C YHL017WP38745 532 aa2.36□□□□□ -2.03
UBP2YOR124C BOI2P39969 1040 aa2.36□□□□□ -2.03
UBP2YOR124C MTR4P47047 1073 aaKnown RBP2.36□□□□□ -2.03
UBP2YOR124C JSN1P47135 1091 aaKnown RBP RIP-Chip data2.36□□□□□ -2.03not detected
UBP2YOR124C NDL1Q06568 189 aa2.36□□□□□ -2.03
UBP2YOR124C YOR223WQ12015 292 aa2.36□□□□□ -2.03
UBP2YOR124C NUR1Q12066 484 aa2.36□□□□□ -2.03
UBP2YOR124C ADE2P21264 571 aaKnown RBP2.35□□□□□ -2.03
UBP2YOR124C KCC4P25389 1037 aa2.35□□□□□ -2.03
UBP2YOR124C PRX1P34227 261 aaKnown RBP2.35□□□□□ -2.03
UBP2YOR124C TFG2P41896 400 aaPredicted RBP2.35□□□□□ -2.03
UBP2YOR124C CTH1P47976 325 aa2.35□□□□□ -2.03
UBP2YOR124C MDG1P53885 366 aa2.35□□□□□ -2.03
UBP2YOR124C YLR177WQ06251 628 aa2.35□□□□□ -2.03
UBP2YOR124C NEW1Q08972 1196 aaKnown RBP2.35□□□□□ -2.03
UBP2YOR124C IOC2Q12072 812 aa2.35□□□□□ -2.03
UBP2YOR124C PUS1Q12211 544 aaKnown RBP2.35□□□□□ -2.03
UBP2YOR124C MSB4Q12317 492 aa2.35□□□□□ -2.03
UBP2YOR124C SRP40P32583 406 aaPredicted RBP2.35□□□□□ -2.03
UBP2YOR124C BCK2P33306 851 aa2.35□□□□□ -2.03
UBP2YOR124C OLA1P38219 394 aaKnown RBP2.35□□□□□ -2.03
UBP2YOR124C LIN1P38852 340 aaPredicted RBP2.35□□□□□ -2.03
UBP2YOR124C YJR079WP47126 109 aa2.35□□□□□ -2.03
UBP2YOR124C ORM1P53224 222 aa2.35□□□□□ -2.03
UBP2YOR124C TLG2Q08144 397 aa2.35□□□□□ -2.03
UBP2YOR124C APL5Q08951 932 aaKnown RBP2.35□□□□□ -2.03
UBP2YOR124C DCS2Q12123 353 aa2.35□□□□□ -2.03
UBP2YOR124C SPT2P06843 333 aaPredicted RBP2.35□□□□□ -2.03
UBP2YOR124C DAL7P21826 554 aa2.35□□□□□ -2.03
UBP2YOR124C SPO11P23179 398 aa2.35□□□□□ -2.03
UBP2YOR124C CPS1P27614 576 aa2.35□□□□□ -2.03
UBP2YOR124C PPH3P32345 308 aa2.35□□□□□ -2.03
UBP2YOR124C BEM4P39011 633 aa2.35□□□□□ -2.03
UBP2YOR124C CCT4P39078 528 aaKnown RBP2.35□□□□□ -2.03
UBP2YOR124C EFM4P40516 257 aa2.35□□□□□ -2.03
UBP2YOR124C VID30P53076 958 aa2.35□□□□□ -2.03
UBP2YOR124C CUE3P53137 624 aaKnown RBP2.35□□□□□ -2.03
UBP2YOR124C UBX2Q04228 584 aa2.35□□□□□ -2.03
UBP2YOR124C ELG1Q12050 791 aa2.35□□□□□ -2.03
UBP2YOR124C SWI1P09547 1314 aa2.34□□□□□ -2.03
UBP2YOR124C UBC1P21734 215 aaKnown RBP2.34□□□□□ -2.03
UBP2YOR124C PDB1P32473 366 aaKnown RBP2.34□□□□□ -2.03
UBP2YOR124C MRP8P35719 219 aa2.34□□□□□ -2.03
UBP2YOR124C DCW1P36091 449 aa2.34□□□□□ -2.03
UBP2YOR124C NDC80P40460 691 aa2.34□□□□□ -2.03
UBP2YOR124C VID28P40547 921 aa2.34□□□□□ -2.03
UBP2YOR124C ARI1P53111 347 aaKnown RBP2.34□□□□□ -2.03
UBP2YOR124C WAR1Q03631 944 aa2.34□□□□□ -2.03
UBP2YOR124C SFH1Q06168 426 aa2.34□□□□□ -2.03
UBP2YOR124C AOS1Q06624 347 aa2.34□□□□□ -2.03
UBP2YOR124C YPL225WQ08971 146 aaKnown RBP2.34□□□□□ -2.03
UBP2YOR124C TUS1Q06412 1307 aa2.34□□□□□ -2.03
UBP2YOR124C RIF1P29539 1916 aa2.34□□□□□ -2.03
UBP2YOR124C GPA1P08539 472 aa2.34□□□□□ -2.03
UBP2YOR124C RPL19AP0CX82 189 aaKnown RBP2.34□□□□□ -2.03
UBP2YOR124C RPL19BP0CX83 189 aaPredicted RBP2.34□□□□□ -2.03
UBP2YOR124C PGI1P12709 554 aaKnown RBP2.34□□□□□ -2.03
UBP2YOR124C KAR2P16474 682 aaKnown RBP2.34□□□□□ -2.03
UBP2YOR124C GAL11P19659 1081 aa2.34□□□□□ -2.03
UBP2YOR124C CBP3P21560 335 aa2.34□□□□□ -2.03
UBP2YOR124C NFU1P32860 256 aa2.34□□□□□ -2.03
UBP2YOR124C SET3P36124 751 aa2.34□□□□□ -2.03
UBP2YOR124C MAL33P38157 468 aa2.34□□□□□ -2.03
UBP2YOR124C AXL1P40851 1208 aa2.34□□□□□ -2.03
UBP2YOR124C YGL242CP53066 181 aa2.34□□□□□ -2.03
UBP2YOR124C VPS75P53853 264 aa2.34□□□□□ -2.03
UBP2YOR124C SUB1P54000 292 aaKnown RBP2.34□□□□□ -2.03
UBP2YOR124C DNM1P54861 757 aa2.34□□□□□ -2.03
UBP2YOR124C SEC5P89102 971 aa2.34□□□□□ -2.03
UBP2YOR124C FMP30Q02883 468 aa2.34□□□□□ -2.03
UBP2YOR124C GPN2Q08726 347 aaPredicted RBP2.34□□□□□ -2.03
UBP2YOR124C RIM20Q12033 661 aa2.34□□□□□ -2.03
UBP2YOR124C CPA2P03965 1118 aaKnown RBP2.34□□□□□ -2.04
UBP2YOR124C PYC1P11154 1178 aaKnown RBP2.34□□□□□ -2.04
UBP2YOR124C RNA1P11745 407 aaKnown RBP2.34□□□□□ -2.04
UBP2YOR124C CLN1P20437 546 aa2.34□□□□□ -2.04
UBP2YOR124C IME1P21190 360 aa2.34□□□□□ -2.04
UBP2YOR124C TYS1P36421 394 aaKnown RBP2.34□□□□□ -2.04
UBP2YOR124C MMS21P38632 267 aa2.34□□□□□ -2.04
UBP2YOR124C RPN7Q06103 429 aaKnown RBP2.34□□□□□ -2.04
UBP2YOR124C YOL057WQ08225 711 aa2.34□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 76.3 ms