RNA–Protein interactions for RNA: YOL148C

SPT20, Transcript of Subunit of the SAGA transcriptional regulatory complex, yeastyeast

Gene SPT20, Length 1,815 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT20YOL148C SEC14P24280 304 aaKnown RBP10.57□□□□□ -0.72
SPT20YOL148C KCC4P25389 1037 aa10.57□□□□□ -0.72
SPT20YOL148C CIC1P38779 376 aaKnown RBP10.57□□□□□ -0.72
SPT20YOL148C VPS8P39702 1274 aa10.57□□□□□ -0.72
SPT20YOL148C YMR1P47147 688 aaKnown RBP RIP-Chip data10.57□□□□□ -0.72not detected
SPT20YOL148C SFH1Q06168 426 aa10.57□□□□□ -0.72
SPT20YOL148C TMA16Q08687 178 aa10.57□□□□□ -0.72
SPT20YOL148C NUP133P36161 1157 aa10.56□□□□□ -0.72
SPT20YOL148C MGA2P40578 1113 aa10.56□□□□□ -0.72
SPT20YOL148C YDR338CQ05497 695 aa10.56□□□□□ -0.72
SPT20YOL148C STE23Q06010 1027 aa10.56□□□□□ -0.72
SPT20YOL148C YOL098CQ12496 1037 aa10.56□□□□□ -0.72
SPT20YOL148C RAD51P25454 400 aa10.56□□□□□ -0.72
SPT20YOL148C BUD16P39988 312 aa10.56□□□□□ -0.72
SPT20YOL148C HCR1Q05775 265 aaKnown RBP10.56□□□□□ -0.72
SPT20YOL148C ISW2Q08773 1120 aa10.56□□□□□ -0.72
SPT20YOL148C YOR223WQ12015 292 aa10.56□□□□□ -0.72
SPT20YOL148C PGA3Q12746 312 aaKnown RBP10.56□□□□□ -0.72
SPT20YOL148C RRP5Q05022 1729 aaKnown RBP10.55□□□□□ -0.72
SPT20YOL148C FBP26P32604 452 aa10.55□□□□□ -0.72
SPT20YOL148C DNM1P54861 757 aa10.55□□□□□ -0.72
SPT20YOL148C VTC3Q02725 835 aa10.55□□□□□ -0.72
SPT20YOL148C EIS1Q05050 843 aaKnown RBP10.55□□□□□ -0.72
SPT20YOL148C SMC6Q12749 1114 aa10.55□□□□□ -0.72
SPT20YOL148C HEL1P36113 551 aa10.54□□□□□ -0.72
SPT20YOL148C CST6P40535 587 aa10.54□□□□□ -0.72
SPT20YOL148C YNR029CP53729 429 aaKnown RBP10.54□□□□□ -0.72
SPT20YOL148C YLR407WQ06070 228 aa10.54□□□□□ -0.72
SPT20YOL148C PRP16P15938 1071 aaPredicted RBP10.54□□□□□ -0.72
SPT20YOL148C CDC60P26637 1090 aaKnown RBP10.54□□□□□ -0.72
SPT20YOL148C UBP12P39538 1254 aa10.54□□□□□ -0.72
SPT20YOL148C YJR079WP47126 109 aa10.54□□□□□ -0.72
SPT20YOL148C RPL22AP05749 121 aaKnown RBP10.53□□□□□ -0.72
SPT20YOL148C MIC19P43594 170 aa10.53□□□□□ -0.72
SPT20YOL148C VAC14Q06708 880 aa10.53□□□□□ -0.72
SPT20YOL148C SDH5Q08230 162 aa10.53□□□□□ -0.72
SPT20YOL148C RAD1P06777 1100 aa10.52□□□□□ -0.73
SPT20YOL148C PXL1P36166 706 aa10.52□□□□□ -0.73
SPT20YOL148C ADE17P38009 592 aaKnown RBP10.52□□□□□ -0.73
SPT20YOL148C YSW1P38280 609 aa10.52□□□□□ -0.73
SPT20YOL148C TRS85P46944 698 aa10.52□□□□□ -0.73
SPT20YOL148C BOP3P53958 396 aa10.52□□□□□ -0.73
SPT20YOL148C GFD1Q04839 188 aaKnown RBP10.52□□□□□ -0.73
SPT20YOL148C HXK1P04806 485 aaKnown RBP10.51□□□□□ -0.73
SPT20YOL148C SEC23P15303 768 aaKnown RBP10.51□□□□□ -0.73
SPT20YOL148C MCM4P30665 933 aaKnown RBP10.51□□□□□ -0.73
SPT20YOL148C CNS1P33313 385 aa10.51□□□□□ -0.73
SPT20YOL148C KTR3P38130 404 aaPredicted RBP10.51□□□□□ -0.73
SPT20YOL148C CCC2P38995 1004 aa10.51□□□□□ -0.73
SPT20YOL148C PIB2P53191 635 aa10.51□□□□□ -0.73
SPT20YOL148C ESF1Q06344 628 aaKnown RBP10.51□□□□□ -0.73
SPT20YOL148C RGP1P16664 663 aa10.51□□□□□ -0.73
SPT20YOL148C PRE10P21242 288 aaKnown RBP RIP-Chip data10.51□□□□□ -0.73not detected
SPT20YOL148C HOS4P40480 1083 aa10.51□□□□□ -0.73
SPT20YOL148C LCB5Q06147 687 aaKnown RBP10.51□□□□□ -0.73
SPT20YOL148C TY4A-HQ6Q5P6 413 aa10.51□□□□□ -0.73
SPT20YOL148C MRPS28P21771 286 aa10.5□□□□□ -0.73
SPT20YOL148C MCX1P38323 520 aaPredicted RBP10.5□□□□□ -0.73
SPT20YOL148C SEC26P41810 973 aaKnown RBP10.5□□□□□ -0.73
SPT20YOL148C ZDS2P54786 942 aa10.5□□□□□ -0.73
SPT20YOL148C NUR1Q12066 484 aa10.5□□□□□ -0.73
SPT20YOL148C PMR1P13586 950 aa10.49□□□□□ -0.73
SPT20YOL148C PEP3P27801 918 aa10.49□□□□□ -0.73
SPT20YOL148C EFM2P38347 419 aa10.49□□□□□ -0.73
SPT20YOL148C ILM1P47155 203 aa10.49□□□□□ -0.73
SPT20YOL148C PXR1P53335 271 aaPredicted RBP10.49□□□□□ -0.73
SPT20YOL148C SPO19Q03029 223 aa10.49□□□□□ -0.73
SPT20YOL148C HOT1Q03213 719 aa10.49□□□□□ -0.73
SPT20YOL148C DAL7P21826 554 aa10.49□□□□□ -0.73
SPT20YOL148C PXA1P41909 870 aa10.49□□□□□ -0.73
SPT20YOL148C NOP6Q07623 225 aaKnown RBP10.49□□□□□ -0.73
SPT20YOL148C JIP3O13555 125 aa10.48□□□□□ -0.73
SPT20YOL148C LPD1P09624 499 aaKnown RBP10.48□□□□□ -0.73
SPT20YOL148C SAC6P32599 642 aaKnown RBP10.48□□□□□ -0.73
SPT20YOL148C ISW1P38144 1129 aa10.48□□□□□ -0.73
SPT20YOL148C PTP3P40048 928 aa10.48□□□□□ -0.73
SPT20YOL148C FYV8P46949 817 aaKnown RBP10.48□□□□□ -0.73
SPT20YOL148C SEC65P29478 273 aa10.47□□□□□ -0.73
SPT20YOL148C YME2P32843 850 aa10.47□□□□□ -0.73
SPT20YOL148C SMF1P38925 575 aa10.47□□□□□ -0.73
SPT20YOL148C CMS1Q07897 291 aaKnown RBP10.47□□□□□ -0.73
SPT20YOL148C CDC8P00572 216 aa10.47□□□□□ -0.73
SPT20YOL148C OSH3P38713 996 aaKnown RBP10.47□□□□□ -0.73
SPT20YOL148C YJR008WP47085 338 aa10.47□□□□□ -0.73
SPT20YOL148C KRS1P15180 591 aaKnown RBP10.46□□□□□ -0.74
SPT20YOL148C IMP2'P32351 346 aa10.46□□□□□ -0.74
SPT20YOL148C DPH5P32469 300 aaPredicted RBP10.46□□□□□ -0.74
SPT20YOL148C PTC4P38089 393 aa10.46□□□□□ -0.74
SPT20YOL148C YJR142WP47173 342 aa10.46□□□□□ -0.74
SPT20YOL148C ECM23Q02710 187 aa10.46□□□□□ -0.74
SPT20YOL148C GAL11P19659 1081 aa10.45□□□□□ -0.74
SPT20YOL148C DIT2P21595 489 aa10.45□□□□□ -0.74
SPT20YOL148C RAD53P22216 821 aa10.45□□□□□ -0.74
SPT20YOL148C SRB4P32569 687 aa10.45□□□□□ -0.74
SPT20YOL148C ALD2P47771 506 aa10.45□□□□□ -0.74
SPT20YOL148C ERG5P54781 538 aa10.45□□□□□ -0.74
SPT20YOL148C AFT2Q08957 416 aa10.45□□□□□ -0.74
SPT20YOL148C HMI1Q12039 706 aa10.45□□□□□ -0.74
SPT20YOL148C YIL177CP40434 1758 aa10.45□□□□□ -0.74
SPT20YOL148C YJL225CP40889 1758 aa10.45□□□□□ -0.74
Retrieved 100 of 5,963 RNA–protein pairs in 13 ms