RNA–Protein interactions for RNA: YOL090W

MSH2, Transcript of Protein that binds to DNA mismatches, yeastyeast

Gene MSH2, Length 2,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH2YOL090W TY2B-OR2Q12501 1770 aa3.87□□□□□ -1.79
MSH2YOL090W PIF1P07271 859 aa3.87□□□□□ -1.79
MSH2YOL090W PRI2P20457 528 aa3.87□□□□□ -1.79
MSH2YOL090W RPB10P22139 70 aa3.87□□□□□ -1.79
MSH2YOL090W IES5P40060 125 aa3.87□□□□□ -1.79
MSH2YOL090W RPT2P40327 437 aaKnown RBP3.87□□□□□ -1.79
MSH2YOL090W RRD1P40454 393 aaKnown RBP3.87□□□□□ -1.79
MSH2YOL090W YJR120WP47157 116 aa3.87□□□□□ -1.79
MSH2YOL090W NOP14Q99207 810 aaKnown RBP3.87□□□□□ -1.79
MSH2YOL090W TY1B-HO13535 1793 aa3.86□□□□□ -1.79
MSH2YOL090W TY1B-DR5P0C2I2 1755 aa3.86□□□□□ -1.79
MSH2YOL090W TY1B-DR6P0C2I3 1755 aa3.86□□□□□ -1.79
MSH2YOL090W TY1B-LR2P0C2I5 1755 aa3.86□□□□□ -1.79
MSH2YOL090W TY1B-LR3P0C2I6 1755 aaKnown RBP3.86□□□□□ -1.79
MSH2YOL090W TY1B-PR1P0C2I9 1755 aaKnown RBP3.86□□□□□ -1.79
MSH2YOL090W TY1B-PR2P0C2J0 1756 aa3.86□□□□□ -1.79
MSH2YOL090W TY1B-PR3P0C2J1 1755 aaKnown RBP3.86□□□□□ -1.79
MSH2YOL090W TY1B-JR1P47098 1755 aa3.86□□□□□ -1.79
MSH2YOL090W TY1B-ML2Q03434 1755 aaKnown RBP3.86□□□□□ -1.79
MSH2YOL090W TY1B-ER1Q03612 1755 aa3.86□□□□□ -1.79
MSH2YOL090W TY1B-ML1Q04711 1755 aaKnown RBP3.86□□□□□ -1.79
MSH2YOL090W TY1B-GR2Q12269 1755 aa3.86□□□□□ -1.79
MSH2YOL090W TY1B-OLQ12273 1755 aa3.86□□□□□ -1.79
MSH2YOL090W TY1B-PLQ12414 1755 aaKnown RBP3.86□□□□□ -1.79
MSH2YOL090W TEC1P18412 486 aa3.86□□□□□ -1.79
MSH2YOL090W MRC1P25588 1096 aa3.86□□□□□ -1.79
MSH2YOL090W FAA3P39002 694 aa3.86□□□□□ -1.79
MSH2YOL090W NOC2P39744 710 aaKnown RBP3.86□□□□□ -1.79
MSH2YOL090W VPS27P40343 622 aaKnown RBP3.86□□□□□ -1.79
MSH2YOL090W FOX2Q02207 900 aaKnown RBP3.86□□□□□ -1.79
MSH2YOL090W APC11Q12157 165 aa3.86□□□□□ -1.79
MSH2YOL090W HIF1Q12373 385 aa3.86□□□□□ -1.79
MSH2YOL090W DUT1P33317 147 aa3.86□□□□□ -1.79
MSH2YOL090W SPF1P39986 1215 aaKnown RBP3.86□□□□□ -1.79
MSH2YOL090W CWC24P53769 259 aa3.86□□□□□ -1.79
MSH2YOL090W PAN1P32521 1480 aa3.86□□□□□ -1.79
MSH2YOL090W HXK1P04806 485 aaKnown RBP3.85□□□□□ -1.79
MSH2YOL090W PRT1P06103 763 aaKnown RBP3.85□□□□□ -1.79
MSH2YOL090W RPL8AP17076 256 aaKnown RBP3.85□□□□□ -1.79
MSH2YOL090W VAN1P23642 535 aa3.85□□□□□ -1.79
MSH2YOL090W TIM54P47045 478 aa3.85□□□□□ -1.79
MSH2YOL090W TYW3P53177 273 aa3.85□□□□□ -1.79
MSH2YOL090W YGR053CP53234 283 aa3.85□□□□□ -1.79
MSH2YOL090W CBC2Q08920 208 aaKnown RBP RIP-Chip data3.85□□□□□ -1.79not detected
MSH2YOL090W YLR125WQ12138 136 aa3.85□□□□□ -1.79
MSH2YOL090W THI4P32318 326 aa3.85□□□□□ -1.79
MSH2YOL090W SPR3P41901 512 aa3.85□□□□□ -1.79
MSH2YOL090W ENT2Q05785 613 aa3.85□□□□□ -1.79
MSH2YOL090W UTP13Q05946 817 aaKnown RBP3.85□□□□□ -1.79
MSH2YOL090W FLC1Q08967 793 aa3.85□□□□□ -1.79
MSH2YOL090W ADR1P07248 1323 aa3.85□□□□□ -1.79
MSH2YOL090W STE5P32917 917 aa3.84□□□□□ -1.79
MSH2YOL090W CHZ1P40019 153 aaPredicted RBP3.84□□□□□ -1.79
MSH2YOL090W YGR021WP53212 290 aa3.84□□□□□ -1.79
MSH2YOL090W TGL2P54857 326 aa3.84□□□□□ -1.79
MSH2YOL090W STE20Q03497 939 aaKnown RBP3.84□□□□□ -1.79
MSH2YOL090W SLX4Q12098 748 aa3.84□□□□□ -1.79
MSH2YOL090W YBR197CP38306 217 aa3.84□□□□□ -1.79
MSH2YOL090W SNF7P39929 240 aaKnown RBP3.84□□□□□ -1.79
MSH2YOL090W RSP5P39940 809 aaKnown RBP3.84□□□□□ -1.79
MSH2YOL090W OPI10Q08202 246 aa3.84□□□□□ -1.79
MSH2YOL090W DPS1P04802 557 aaKnown RBP3.84□□□□□ -1.8
MSH2YOL090W GCD6P32501 712 aaKnown RBP3.84□□□□□ -1.8
MSH2YOL090W HOS4P40480 1083 aa3.84□□□□□ -1.8
MSH2YOL090W SPO20Q04359 397 aa3.84□□□□□ -1.8
MSH2YOL090W TMA17Q12513 150 aa3.84□□□□□ -1.8
MSH2YOL090W SPT2P06843 333 aaPredicted RBP3.83□□□□□ -1.8
MSH2YOL090W CDC34P14682 295 aa3.83□□□□□ -1.8
MSH2YOL090W UBP1P25037 809 aa3.83□□□□□ -1.8
MSH2YOL090W VPS35P34110 944 aa3.83□□□□□ -1.8
MSH2YOL090W UBP9P39967 754 aa3.83□□□□□ -1.8
MSH2YOL090W ATG16Q03818 150 aa3.83□□□□□ -1.8
MSH2YOL090W TDA5Q06417 326 aaKnown RBP3.83□□□□□ -1.8
MSH2YOL090W TRS33Q99394 268 aa3.83□□□□□ -1.8
MSH2YOL090W NTE1Q04958 1679 aa3.83□□□□□ -1.8
MSH2YOL090W RPN12P32496 274 aa3.83□□□□□ -1.8
MSH2YOL090W SPT23P35210 1082 aa3.83□□□□□ -1.8
MSH2YOL090W CWC22P53333 577 aaKnown RBP3.83□□□□□ -1.8
MSH2YOL090W NAN1Q02931 896 aaKnown RBP3.83□□□□□ -1.8
MSH2YOL090W MTC5Q03897 1148 aa3.83□□□□□ -1.8
MSH2YOL090W SND1Q04007 877 aa3.83□□□□□ -1.8
MSH2YOL090W CAB1Q04430 367 aa3.83□□□□□ -1.8
MSH2YOL090W NTG2Q08214 380 aa3.83□□□□□ -1.8
MSH2YOL090W MMS1Q06211 1407 aa3.83□□□□□ -1.8
MSH2YOL090W CIT1P00890 479 aa3.82□□□□□ -1.8
MSH2YOL090W VID27P40157 782 aa3.82□□□□□ -1.8
MSH2YOL090W BDP1P46678 594 aa3.82□□□□□ -1.8
MSH2YOL090W HDA3Q06623 655 aa3.82□□□□□ -1.8
MSH2YOL090W ATG13Q06628 738 aa3.82□□□□□ -1.8
MSH2YOL090W ALR1Q08269 859 aa3.82□□□□□ -1.8
MSH2YOL090W UFD4P33202 1483 aa3.82□□□□□ -1.8
MSH2YOL090W CCP1P00431 361 aa3.82□□□□□ -1.8
MSH2YOL090W MPH2P0CD99 609 aa3.82□□□□□ -1.8
MSH2YOL090W ISC10P32645 267 aa3.82□□□□□ -1.8
MSH2YOL090W PRE3P38624 215 aa3.82□□□□□ -1.8
MSH2YOL090W AIM9P40053 627 aaKnown RBP3.82□□□□□ -1.8
MSH2YOL090W CDC55Q00362 526 aa3.82□□□□□ -1.8
MSH2YOL090W TBF1Q02457 562 aa3.82□□□□□ -1.8
MSH2YOL090W ISR1Q06098 443 aaKnown RBP3.82□□□□□ -1.8
MSH2YOL090W ERP4Q12450 207 aa3.82□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 12.8 ms