RNA–Protein interactions for RNA: YNL075W

IMP4, Transcript of Component of the SSU processome, yeast

Gene IMP4, Length 873 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
IMP4	YNL075W	SPR3	P41901	512 aa		4.9	□□□□□ -1.63
IMP4	YNL075W	NUP192	P47054	1683 aa		4.89	□□□□□ -1.63
IMP4	YNL075W	BRL1	P38770	471 aa		4.89	□□□□□ -1.63
IMP4	YNL075W	LSB6	P42951	607 aa		4.89	□□□□□ -1.63
IMP4	YNL075W	ALD4	P46367	519 aa	Known RBP	4.89	□□□□□ -1.63
IMP4	YNL075W	TY1A-DR2	Q03964	440 aa	Known RBP	4.89	□□□□□ -1.63
IMP4	YNL075W	CAB1	Q04430	367 aa		4.89	□□□□□ -1.63
IMP4	YNL075W	YPQ2	Q06328	317 aa		4.89	□□□□□ -1.63
IMP4	YNL075W	MCA1	Q08601	432 aa		4.88	□□□□□ -1.63
IMP4	YNL075W	RAD9	P14737	1309 aa		4.88	□□□□□ -1.63
IMP4	YNL075W	LEU1	P07264	779 aa	Known RBP	4.87	□□□□□ -1.63
IMP4	YNL075W	LEU3	P08638	886 aa		4.87	□□□□□ -1.63
IMP4	YNL075W	TAT1	P38085	619 aa		4.87	□□□□□ -1.63
IMP4	YNL075W	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	4.87	□□□□□ -1.63	not detected
IMP4	YNL075W	RPP1A	P05318	106 aa	Predicted RBP	4.86	□□□□□ -1.63
IMP4	YNL075W	SWI5	P08153	709 aa		4.86	□□□□□ -1.63
IMP4	YNL075W	SUP45	P12385	437 aa	Known RBP	4.86	□□□□□ -1.63
IMP4	YNL075W	LEO1	P38439	464 aa		4.86	□□□□□ -1.63
IMP4	YNL075W	RPN1	P38764	993 aa	Known RBP	4.86	□□□□□ -1.63
IMP4	YNL075W	TFB3	Q03290	321 aa		4.86	□□□□□ -1.63
IMP4	YNL075W	TY3B-I	Q7LHG5	1498 aa	Known RBP	4.86	□□□□□ -1.63
IMP4	YNL075W	BIO2	P32451	375 aa		4.85	□□□□□ -1.63
IMP4	YNL075W	YMR074C	Q04773	145 aa		4.85	□□□□□ -1.63
IMP4	YNL075W	ENT1	Q12518	454 aa		4.85	□□□□□ -1.63
IMP4	YNL075W	ENO2	P00925	437 aa	Known RBP	4.84	□□□□□ -1.63
IMP4	YNL075W	NAP1	P25293	417 aa	Known RBP	4.84	□□□□□ -1.63
IMP4	YNL075W	MSC7	P38694	644 aa		4.84	□□□□□ -1.63
IMP4	YNL075W	NOP7	P53261	605 aa	Known RBP	4.84	□□□□□ -1.63
IMP4	YNL075W	MCM1	P11746	286 aa		4.83	□□□□□ -1.64
IMP4	YNL075W	PKC1	P24583	1151 aa		4.83	□□□□□ -1.64
IMP4	YNL075W	AIM9	P40053	627 aa	Known RBP	4.83	□□□□□ -1.64
IMP4	YNL075W	PRY1	P47032	299 aa		4.83	□□□□□ -1.64
IMP4	YNL075W	ALD2	P47771	506 aa		4.83	□□□□□ -1.64
IMP4	YNL075W	IMH1	Q06704	911 aa	Known RBP	4.83	□□□□□ -1.64
IMP4	YNL075W	RGP1	P16664	663 aa		4.82	□□□□□ -1.64
IMP4	YNL075W	YNL108C	P53929	270 aa		4.82	□□□□□ -1.64
IMP4	YNL075W	YPL034W	Q03083	165 aa		4.82	□□□□□ -1.64
IMP4	YNL075W	RPS6A	P0CX37	236 aa	Known RBP	4.81	□□□□□ -1.64
IMP4	YNL075W	RPS6B	P0CX38	236 aa	Predicted RBP	4.81	□□□□□ -1.64
IMP4	YNL075W	CPS1	P27614	576 aa		4.81	□□□□□ -1.64
IMP4	YNL075W	MAC1	P35192	417 aa		4.81	□□□□□ -1.64
IMP4	YNL075W	YTA6	P40328	754 aa		4.81	□□□□□ -1.64
IMP4	YNL075W	YFL034W	P43564	1073 aa		4.81	□□□□□ -1.64
IMP4	YNL075W	RIM21	P48565	533 aa		4.81	□□□□□ -1.64
IMP4	YNL075W	YNL165W	P53891	406 aa		4.81	□□□□□ -1.64
IMP4	YNL075W	ESL2	P36168	1195 aa		4.8	□□□□□ -1.64
IMP4	YNL075W	TPS3	P38426	1054 aa	Known RBP	4.8	□□□□□ -1.64
IMP4	YNL075W	RRP5	Q05022	1729 aa	Known RBP	4.8	□□□□□ -1.64
IMP4	YNL075W	YRF1-2	P40105	1681 aa		4.8	□□□□□ -1.64
IMP4	YNL075W	RDS2	P19541	446 aa	Known RBP	4.79	□□□□□ -1.64
IMP4	YNL075W	PRP45	P28004	379 aa	Predicted RBP	4.79	□□□□□ -1.64
IMP4	YNL075W	TAF8	Q03750	510 aa		4.79	□□□□□ -1.64
IMP4	YNL075W	NTH2	P35172	780 aa		4.78	□□□□□ -1.64
IMP4	YNL075W	TAF5	P38129	798 aa		4.78	□□□□□ -1.64
IMP4	YNL075W	RCM1	P53972	490 aa		4.78	□□□□□ -1.64
IMP4	YNL075W	HEH2	Q03281	663 aa		4.78	□□□□□ -1.64
IMP4	YNL075W	NHA1	Q99271	985 aa		4.78	□□□□□ -1.64
IMP4	YNL075W	PRP5	P21372	849 aa	Predicted RBP	4.77	□□□□□ -1.65
IMP4	YNL075W	MLF3	P32047	452 aa		4.77	□□□□□ -1.65
IMP4	YNL075W	ALO1	P54783	526 aa	Known RBP	4.77	□□□□□ -1.65
IMP4	YNL075W	GLT1	Q12680	2145 aa	Known RBP	4.77	□□□□□ -1.65
IMP4	YNL075W	ADE6	P38972	1358 aa	Known RBP	4.77	□□□□□ -1.65
IMP4	YNL075W	PGM2	P37012	569 aa	Known RBP	4.76	□□□□□ -1.65
IMP4	YNL075W	ALG14	P38242	237 aa		4.76	□□□□□ -1.65
IMP4	YNL075W	BUD9	P53226	547 aa		4.76	□□□□□ -1.65
IMP4	YNL075W	Q0182	Q9ZZW1	134 aa		4.76	□□□□□ -1.65
IMP4	YNL075W	PSK1	P31374	1356 aa		4.76	□□□□□ -1.65
IMP4	YNL075W	EDE1	P34216	1381 aa		4.76	□□□□□ -1.65
IMP4	YNL075W	UBP1	P25037	809 aa		4.75	□□□□□ -1.65
IMP4	YNL075W	PPH3	P32345	308 aa		4.75	□□□□□ -1.65
IMP4	YNL075W	PRK1	P40494	810 aa		4.75	□□□□□ -1.65
IMP4	YNL075W	TSC13	Q99190	310 aa		4.74	□□□□□ -1.65
IMP4	YNL075W	PDI1	P17967	522 aa	Known RBP	4.73	□□□□□ -1.65
IMP4	YNL075W	OMA1	P36163	345 aa		4.73	□□□□□ -1.65
IMP4	YNL075W	INP52	P50942	1183 aa		4.73	□□□□□ -1.65
IMP4	YNL075W	SKP1	P52286	194 aa		4.73	□□□□□ -1.65
IMP4	YNL075W	MRX10	Q05648	414 aa		4.73	□□□□□ -1.65
IMP4	YNL075W	TY4B-H	P0C2J7	1802 aa		4.72	□□□□□ -1.65
IMP4	YNL075W	TY4B-J	P47024	1803 aa		4.72	□□□□□ -1.65
IMP4	YNL075W	CYT1	P07143	309 aa		4.72	□□□□□ -1.65
IMP4	YNL075W	SPE2	P21182	396 aa		4.72	□□□□□ -1.65
IMP4	YNL075W	NAR1	P23503	491 aa	Known RBP	4.72	□□□□□ -1.65
IMP4	YNL075W	NCL1	P38205	684 aa	Known RBP	4.72	□□□□□ -1.65
IMP4	YNL075W	YJL007C	P47080	104 aa		4.72	□□□□□ -1.65
IMP4	YNL075W	MTO1	P53070	669 aa		4.72	□□□□□ -1.65
IMP4	YNL075W	GIS4	Q04233	774 aa		4.72	□□□□□ -1.65
IMP4	YNL075W	RSF2	P46974	1380 aa		4.72	□□□□□ -1.65
IMP4	YNL075W	ROM2	P51862	1356 aa	Known RBP	4.72	□□□□□ -1.65
IMP4	YNL075W	AI3	P03877	415 aa		4.71	□□□□□ -1.66
IMP4	YNL075W	IRC24	P40580	263 aa		4.71	□□□□□ -1.66
IMP4	YNL075W	RPN11	P43588	306 aa	Known RBP	4.71	□□□□□ -1.66
IMP4	YNL075W	MTR4	P47047	1073 aa	Known RBP	4.71	□□□□□ -1.66
IMP4	YNL075W	PRP43	P53131	767 aa	Known RBP	4.71	□□□□□ -1.66
IMP4	YNL075W	UTP4	Q06679	776 aa	Known RBP	4.71	□□□□□ -1.66
IMP4	YNL075W	YEF3	P16521	1044 aa	Known RBP	4.7	□□□□□ -1.66
IMP4	YNL075W	PGM1	P33401	570 aa	Known RBP	4.7	□□□□□ -1.66
IMP4	YNL075W	DOT5	P40553	215 aa		4.7	□□□□□ -1.66
IMP4	YNL075W	KIP3	P53086	805 aa	Known RBP	4.7	□□□□□ -1.66
IMP4	YNL075W	SLM3	Q12093	417 aa		4.7	□□□□□ -1.66
IMP4	YNL075W	URB1	P34241	1764 aa	Known RBP	4.7	□□□□□ -1.66

Retrieved 100 of 5,963 RNA–protein pairs in 43.7 ms