RNA–Protein interactions for RNA: YMR016C

SOK2, Transcript of Nuclear protein that negatively regulates pseudohyphal differentiation, yeastyeast

Gene SOK2, Length 2,358 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SOK2YMR016C UBX7P38349 436 aa3.63□□□□□ -1.83
SOK2YMR016C INP51P40559 946 aaKnown RBP3.63□□□□□ -1.83
SOK2YMR016C PUF6Q04373 656 aaKnown RBP3.63□□□□□ -1.83
SOK2YMR016C YML083CQ04526 418 aa3.63□□□□□ -1.83
SOK2YMR016C MAG2Q06436 670 aaKnown RBP3.63□□□□□ -1.83
SOK2YMR016C NOP8Q08287 484 aaPredicted RBP3.63□□□□□ -1.83
SOK2YMR016C CPS1P27614 576 aa3.63□□□□□ -1.83
SOK2YMR016C PAN5P38787 379 aa3.63□□□□□ -1.83
SOK2YMR016C FIR1P40020 876 aa3.63□□□□□ -1.83
SOK2YMR016C PUP1P25043 261 aa3.62□□□□□ -1.83
SOK2YMR016C MAE1P36013 669 aaKnown RBP3.62□□□□□ -1.83
SOK2YMR016C ALD4P46367 519 aaKnown RBP3.62□□□□□ -1.83
SOK2YMR016C SOG2Q08817 791 aa3.62□□□□□ -1.83
SOK2YMR016C MSN1P22148 382 aa3.62□□□□□ -1.83
SOK2YMR016C NAM7P30771 971 aaKnown RBP3.62□□□□□ -1.83
SOK2YMR016C ISC10P32645 267 aa3.62□□□□□ -1.83
SOK2YMR016C DNA2P38859 1522 aa3.62□□□□□ -1.83
SOK2YMR016C BIO5P53744 561 aaKnown RBP3.61□□□□□ -1.83
SOK2YMR016C SPO71Q03868 1245 aa3.61□□□□□ -1.83
SOK2YMR016C SSA1P10591 642 aaKnown RBP3.6□□□□□ -1.83
SOK2YMR016C PUN1Q06991 263 aa3.6□□□□□ -1.83
SOK2YMR016C FUS1P11710 512 aa3.6□□□□□ -1.83
SOK2YMR016C SRS2P12954 1174 aa3.6□□□□□ -1.83
SOK2YMR016C AIM46P38885 310 aa3.6□□□□□ -1.83
SOK2YMR016C POL5P39985 1022 aaKnown RBP3.6□□□□□ -1.83
SOK2YMR016C YML020WQ03722 664 aa3.6□□□□□ -1.83
SOK2YMR016C EMG1Q06287 252 aaKnown RBP3.6□□□□□ -1.83
SOK2YMR016C GEF1P37020 779 aa3.59□□□□□ -1.83
SOK2YMR016C HXT8P40886 569 aa3.59□□□□□ -1.83
SOK2YMR016C ELG1Q12050 791 aa3.59□□□□□ -1.83
SOK2YMR016C NCE103P53615 221 aa3.59□□□□□ -1.84
SOK2YMR016C ALD3P54114 506 aa3.59□□□□□ -1.84
SOK2YMR016C UBP5P39944 805 aa3.58□□□□□ -1.84
SOK2YMR016C GIC2Q06648 383 aa3.58□□□□□ -1.84
SOK2YMR016C NSI1Q12457 570 aa3.58□□□□□ -1.84
SOK2YMR016C TFA2P36145 328 aa3.57□□□□□ -1.84
SOK2YMR016C FAR11P53917 953 aa3.57□□□□□ -1.84
SOK2YMR016C RRN6P32786 894 aa3.56□□□□□ -1.84
SOK2YMR016C NTA1P40354 457 aa3.56□□□□□ -1.84
SOK2YMR016C NIT1P40447 199 aa3.56□□□□□ -1.84
SOK2YMR016C NEO1P40527 1151 aa3.56□□□□□ -1.84
SOK2YMR016C ECL1P48235 211 aa3.56□□□□□ -1.84
SOK2YMR016C SSA4P22202 642 aaKnown RBP3.56□□□□□ -1.84
SOK2YMR016C BOI1P38041 980 aaKnown RBP3.55□□□□□ -1.84
SOK2YMR016C SMC1P32908 1225 aa3.54□□□□□ -1.84
SOK2YMR016C RGD2P43556 714 aa3.54□□□□□ -1.84
SOK2YMR016C KIP3P53086 805 aaKnown RBP3.54□□□□□ -1.84
SOK2YMR016C YJR124CP47159 448 aa3.54□□□□□ -1.84
SOK2YMR016C YNR065CP53751 1116 aa3.54□□□□□ -1.84
SOK2YMR016C SEN54Q02825 467 aaPredicted RBP3.54□□□□□ -1.84
SOK2YMR016C YOR059CQ08448 450 aaKnown RBP3.54□□□□□ -1.84
SOK2YMR016C YLL054CQ12244 843 aa3.54□□□□□ -1.84
SOK2YMR016C ERS1P17261 260 aa3.53□□□□□ -1.84
SOK2YMR016C RNQ1P25367 405 aa3.53□□□□□ -1.84
SOK2YMR016C RAD55P38953 406 aa3.53□□□□□ -1.84
SOK2YMR016C FET4P40988 552 aa3.53□□□□□ -1.84
SOK2YMR016C MMM1P41800 426 aa3.53□□□□□ -1.84
SOK2YMR016C PRP43P53131 767 aaKnown RBP3.53□□□□□ -1.84
SOK2YMR016C SDH1Q00711 640 aa3.53□□□□□ -1.84
SOK2YMR016C HAS1Q03532 505 aaKnown RBP3.53□□□□□ -1.84
SOK2YMR016C CWC15Q03772 175 aaKnown RBP3.53□□□□□ -1.84
SOK2YMR016C YOR223WQ12015 292 aa3.53□□□□□ -1.84
SOK2YMR016C APC11Q12157 165 aa3.53□□□□□ -1.84
SOK2YMR016C POL12P38121 705 aaPredicted RBP3.53□□□□□ -1.84
SOK2YMR016C CIT3P43635 486 aa3.53□□□□□ -1.84
SOK2YMR016C HVG1P0CE11 249 aa3.52□□□□□ -1.85
SOK2YMR016C SEG2P34250 1132 aa3.52□□□□□ -1.85
SOK2YMR016C IRS4P36115 615 aaKnown RBP3.52□□□□□ -1.85
SOK2YMR016C SUT1P53032 299 aaKnown RBP3.52□□□□□ -1.85
SOK2YMR016C GLO4Q12320 285 aa3.52□□□□□ -1.85
SOK2YMR016C DFG16Q99234 619 aa3.52□□□□□ -1.85
SOK2YMR016C YMR074CQ04773 145 aa3.52□□□□□ -1.85
SOK2YMR016C PNP1Q05788 311 aa3.52□□□□□ -1.85
SOK2YMR016C GCD1P09032 578 aaPredicted RBP3.51□□□□□ -1.85
SOK2YMR016C PSY2P40164 858 aa3.51□□□□□ -1.85
SOK2YMR016C LRG1P35688 1017 aa3.51□□□□□ -1.85
SOK2YMR016C SSF1P38789 453 aaPredicted RBP3.51□□□□□ -1.85
SOK2YMR016C TIF6Q12522 245 aaKnown RBP3.51□□□□□ -1.85
SOK2YMR016C LSO1Q3E827 93 aa3.5□□□□□ -1.85
SOK2YMR016C TRL1P09880 827 aaKnown RBP3.49□□□□□ -1.85
SOK2YMR016C SEA4P38164 1038 aa3.49□□□□□ -1.85
SOK2YMR016C PYC2P32327 1180 aaKnown RBP3.49□□□□□ -1.85
SOK2YMR016C YKL222CP35995 705 aa3.49□□□□□ -1.85
SOK2YMR016C GCV1P48015 400 aa3.49□□□□□ -1.85
SOK2YMR016C RCM1P53972 490 aa3.49□□□□□ -1.85
SOK2YMR016C YCR015CP25616 317 aa3.48□□□□□ -1.85
SOK2YMR016C KTR2P33550 425 aa3.48□□□□□ -1.85
SOK2YMR016C WHI3P34761 661 aaKnown RBP3.48□□□□□ -1.85
SOK2YMR016C GPT2P36148 743 aa3.48□□□□□ -1.85
SOK2YMR016C FUR4P05316 633 aaKnown RBP3.47□□□□□ -1.85
SOK2YMR016C GAS1P22146 559 aaKnown RBP3.47□□□□□ -1.85
SOK2YMR016C DOT1Q04089 582 aaKnown RBP3.47□□□□□ -1.85
SOK2YMR016C RPB10P22139 70 aa3.47□□□□□ -1.85
SOK2YMR016C HSP78P33416 811 aa3.47□□□□□ -1.85
SOK2YMR016C CDC3P32457 520 aaKnown RBP3.46□□□□□ -1.86
SOK2YMR016C YHL008CP38750 627 aa3.46□□□□□ -1.86
SOK2YMR016C BOL3P39724 118 aa3.46□□□□□ -1.86
SOK2YMR016C YIG1Q08956 461 aa3.46□□□□□ -1.86
SOK2YMR016C HAT1Q12341 374 aa3.46□□□□□ -1.86
SOK2YMR016C ESC8Q08119 714 aa3.46□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 15.4 ms