RNA–Protein interactions for RNA: YLR437C

DIF1, Transcript of Protein that regulates nuclear localization of Rnr2p and Rnr4p, yeast

Gene DIF1, Length 402 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DIF1	YLR437C	CLC1	P17891	233 aa		11.23	□□□□□ -0.61
DIF1	YLR437C	SIS2	P36024	562 aa		11.23	□□□□□ -0.61
DIF1	YLR437C	DPL1	Q05567	589 aa		11.23	□□□□□ -0.61
DIF1	YLR437C	RRG1	Q12167	365 aa	Predicted RBP	11.23	□□□□□ -0.61
DIF1	YLR437C	RPS7A	P26786	190 aa	Known RBP	11.22	□□□□□ -0.61
DIF1	YLR437C	APL6	P46682	809 aa		11.22	□□□□□ -0.61
DIF1	YLR437C	HST1	P53685	503 aa		11.22	□□□□□ -0.61
DIF1	YLR437C	RPS15	Q01855	142 aa	Known RBP	11.22	□□□□□ -0.61
DIF1	YLR437C	ECM23	Q02710	187 aa		11.22	□□□□□ -0.61
DIF1	YLR437C	MRD1	Q06106	887 aa	Known RBP	11.22	□□□□□ -0.61
DIF1	YLR437C	MATALPHA2	P0CY08	210 aa		11.21	□□□□□ -0.61
DIF1	YLR437C	HMLALPHA2	P0CY09	210 aa		11.21	□□□□□ -0.61
DIF1	YLR437C	PRX1	P34227	261 aa	Known RBP	11.21	□□□□□ -0.61
DIF1	YLR437C	TTI1	P36097	1038 aa		11.21	□□□□□ -0.61
DIF1	YLR437C	YHL017W	P38745	532 aa		11.21	□□□□□ -0.61
DIF1	YLR437C	EPL1	P43572	832 aa		11.21	□□□□□ -0.61
DIF1	YLR437C	PEX14	P53112	341 aa		11.21	□□□□□ -0.61
DIF1	YLR437C	PUS6	P53294	404 aa		11.21	□□□□□ -0.61
DIF1	YLR437C	NSG2	P53898	299 aa		11.21	□□□□□ -0.61
DIF1	YLR437C	HAP5	Q02516	242 aa		11.21	□□□□□ -0.61
DIF1	YLR437C	COG8	Q04632	607 aa		11.21	□□□□□ -0.61
DIF1	YLR437C	EST2	Q06163	884 aa		11.21	□□□□□ -0.61
DIF1	YLR437C	PSK2	Q08217	1101 aa		11.21	□□□□□ -0.61
DIF1	YLR437C	FLO11	P08640	1367 aa		11.2	□□□□□ -0.62
DIF1	YLR437C	CPA2	P03965	1118 aa	Known RBP	11.2	□□□□□ -0.62
DIF1	YLR437C	YHL050C	P38721	697 aa		11.2	□□□□□ -0.62
DIF1	YLR437C	RTS1	P38903	757 aa		11.2	□□□□□ -0.62
DIF1	YLR437C	ELG1	Q12050	791 aa		11.2	□□□□□ -0.62
DIF1	YLR437C	DIP2	Q12220	943 aa	Predicted RBP	11.2	□□□□□ -0.62
DIF1	YLR437C	AFG2	P32794	780 aa		11.19	□□□□□ -0.62
DIF1	YLR437C	ARL1	P38116	183 aa	Known RBP	11.19	□□□□□ -0.62
DIF1	YLR437C	BUD6	P41697	788 aa		11.19	□□□□□ -0.62
DIF1	YLR437C	HDA1	P53973	706 aa		11.19	□□□□□ -0.62
DIF1	YLR437C	YPL260W	Q08977	551 aa		11.19	□□□□□ -0.62
DIF1	YLR437C	ANP1	P32629	500 aa		11.18	□□□□□ -0.62
DIF1	YLR437C	SHC1	P39000	512 aa		11.18	□□□□□ -0.62
DIF1	YLR437C	ACK1	Q07622	623 aa	Predicted RBP	11.18	□□□□□ -0.62
DIF1	YLR437C	PFK2	P16862	959 aa	Known RBP RIP-Chip data	11.17	□□□□□ -0.62	not detected
DIF1	YLR437C	CIR1	P42940	261 aa		11.17	□□□□□ -0.62
DIF1	YLR437C	PTK2	P47116	818 aa	Known RBP	11.17	□□□□□ -0.62
DIF1	YLR437C	YLR407W	Q06070	228 aa		11.17	□□□□□ -0.62
DIF1	YLR437C	PEX19	Q07418	342 aa		11.17	□□□□□ -0.62
DIF1	YLR437C	YPL150W	Q12152	901 aa		11.17	□□□□□ -0.62
DIF1	YLR437C	HCA4	P20448	770 aa	Known RBP	11.16	□□□□□ -0.62
DIF1	YLR437C	MYO3	P36006	1272 aa		11.16	□□□□□ -0.62
DIF1	YLR437C	AKR1	P39010	764 aa		11.16	□□□□□ -0.62
DIF1	YLR437C	VID27	P40157	782 aa		11.16	□□□□□ -0.62
DIF1	YLR437C	UBP10	P53874	792 aa	Predicted RBP	11.16	□□□□□ -0.62
DIF1	YLR437C	TFC6	Q06339	672 aa		11.16	□□□□□ -0.62
DIF1	YLR437C	RAD61	Q99359	647 aa		11.16	□□□□□ -0.62
DIF1	YLR437C	KEX1	P09620	729 aa		11.15	□□□□□ -0.62
DIF1	YLR437C	RIT1	P23796	513 aa		11.15	□□□□□ -0.62
DIF1	YLR437C	RFC5	P38251	354 aa		11.15	□□□□□ -0.62
DIF1	YLR437C	HYR1	P40581	163 aa	Known RBP	11.15	□□□□□ -0.62
DIF1	YLR437C	SEN54	Q02825	467 aa	Predicted RBP	11.15	□□□□□ -0.62
DIF1	YLR437C	KEL3	Q08979	651 aa	Predicted RBP	11.15	□□□□□ -0.62
DIF1	YLR437C	MPH3	P0CE00	602 aa		11.14	□□□□□ -0.63
DIF1	YLR437C	MSM1	P22438	575 aa		11.13	□□□□□ -0.63
DIF1	YLR437C	MBR1	P23493	339 aa		11.13	□□□□□ -0.63
DIF1	YLR437C	RDS1	P25611	832 aa		11.13	□□□□□ -0.63
DIF1	YLR437C	PRO3	P32263	286 aa	Known RBP	11.13	□□□□□ -0.63
DIF1	YLR437C	MAL33	P38157	468 aa		11.13	□□□□□ -0.63
DIF1	YLR437C	RVS167	P39743	482 aa	Known RBP	11.13	□□□□□ -0.63
DIF1	YLR437C	MSH4	P40965	878 aa	Predicted RBP	11.13	□□□□□ -0.63
DIF1	YLR437C	SQS1	P53866	767 aa	Known RBP	11.13	□□□□□ -0.63
DIF1	YLR437C	ATG20	Q07528	640 aa		11.13	□□□□□ -0.63
DIF1	YLR437C	APC11	Q12157	165 aa		11.13	□□□□□ -0.63
DIF1	YLR437C	HSP82	P02829	709 aa	Known RBP	11.12	□□□□□ -0.63
DIF1	YLR437C	RPS9B	P05755	195 aa	Known RBP	11.12	□□□□□ -0.63
DIF1	YLR437C	DIT2	P21595	489 aa		11.12	□□□□□ -0.63
DIF1	YLR437C	RPN10	P38886	268 aa	Known RBP	11.12	□□□□□ -0.63
DIF1	YLR437C	CSM2	P40465	213 aa		11.12	□□□□□ -0.63
DIF1	YLR437C	TRM44	Q02648	567 aa	Known RBP	11.12	□□□□□ -0.63
DIF1	YLR437C	CRF1	Q04930	467 aa		11.12	□□□□□ -0.63
DIF1	YLR437C	MAK31	P23059	88 aa		11.11	□□□□□ -0.63
DIF1	YLR437C	STV1	P37296	890 aa		11.11	□□□□□ -0.63
DIF1	YLR437C	RSM25	P40496	264 aa		11.11	□□□□□ -0.63
DIF1	YLR437C	ISW2	Q08773	1120 aa		11.11	□□□□□ -0.63
DIF1	YLR437C	FRS2	P15625	503 aa	Known RBP	11.1	□□□□□ -0.63
DIF1	YLR437C	BMH2	P34730	273 aa	Known RBP	11.1	□□□□□ -0.63
DIF1	YLR437C	DID4	P36108	232 aa		11.1	□□□□□ -0.63
DIF1	YLR437C	VPS8	P39702	1274 aa		11.1	□□□□□ -0.63
DIF1	YLR437C	CCT5	P40413	562 aa	Known RBP	11.1	□□□□□ -0.63
DIF1	YLR437C	ALG2	P43636	503 aa		11.1	□□□□□ -0.63
DIF1	YLR437C	VPS4	P52917	437 aa		11.1	□□□□□ -0.63
DIF1	YLR437C	YOR111W	Q99210	232 aa		11.1	□□□□□ -0.63
DIF1	YLR437C	AIM44	Q99299	758 aa		11.1	□□□□□ -0.63
DIF1	YLR437C	GAP1	P19145	602 aa	Predicted RBP	11.09	□□□□□ -0.63
DIF1	YLR437C	SWI4	P25302	1093 aa	Known RBP	11.09	□□□□□ -0.63
DIF1	YLR437C	KNS1	P32350	737 aa	Predicted RBP	11.09	□□□□□ -0.63
DIF1	YLR437C	RPN12	P32496	274 aa		11.09	□□□□□ -0.63
DIF1	YLR437C	MAL31	P38156	614 aa		11.09	□□□□□ -0.63
DIF1	YLR437C	YJL171C	P46992	396 aa		11.09	□□□□□ -0.63
DIF1	YLR437C	PIL1	P53252	339 aa	Known RBP	11.09	□□□□□ -0.63
DIF1	YLR437C	MYO1	P08964	1928 aa		11.08	□□□□□ -0.64
DIF1	YLR437C	CBP3	P21560	335 aa		11.08	□□□□□ -0.64
DIF1	YLR437C	MTC3	P53077	123 aa		11.08	□□□□□ -0.64
DIF1	YLR437C	MYO5	Q04439	1219 aa	Known RBP	11.08	□□□□□ -0.64
DIF1	YLR437C	PCL8	Q08966	492 aa		11.08	□□□□□ -0.64
DIF1	YLR437C	PGI1	P12709	554 aa	Known RBP	11.07	□□□□□ -0.64

Retrieved 100 of 5,963 RNA–protein pairs in 54.6 ms