RNA–Protein interactions for RNA: YLR180W

SAM1, Transcript of S-adenosylmethionine synthetase, yeast

Gene SAM1, Length 1,149 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SAM1	YLR180W	RRI2	Q12348	645 aa		11.68	□□□□□ -0.54
SAM1	YLR180W	SEC18	P18759	758 aa	Known RBP	11.67	□□□□□ -0.54
SAM1	YLR180W	YPP1	P46951	817 aa		11.67	□□□□□ -0.54
SAM1	YLR180W	SLA1	P32790	1244 aa		11.66	□□□□□ -0.54
SAM1	YLR180W	YFL040W	P43562	540 aa		11.66	□□□□□ -0.54
SAM1	YLR180W	NSG2	P53898	299 aa		11.66	□□□□□ -0.54
SAM1	YLR180W	GYP5	Q12344	894 aa		11.66	□□□□□ -0.54
SAM1	YLR180W	DAL5	P15365	543 aa		11.65	□□□□□ -0.54
SAM1	YLR180W	MSH4	P40965	878 aa	Predicted RBP	11.65	□□□□□ -0.54
SAM1	YLR180W	SNU71	P53207	620 aa	Known RBP	11.65	□□□□□ -0.54
SAM1	YLR180W	YPL034W	Q03083	165 aa		11.65	□□□□□ -0.54
SAM1	YLR180W	KIN1	P13185	1064 aa		11.64	□□□□□ -0.55
SAM1	YLR180W	UIP5	P36137	443 aa		11.64	□□□□□ -0.55
SAM1	YLR180W	HAL5	P38970	855 aa	Known RBP	11.64	□□□□□ -0.55
SAM1	YLR180W	SUB2	Q07478	446 aa	Known RBP	11.64	□□□□□ -0.55
SAM1	YLR180W	YJL007C	P47080	104 aa		11.63	□□□□□ -0.55
SAM1	YLR180W	CSI1	Q04368	295 aa		11.63	□□□□□ -0.55
SAM1	YLR180W	YDL124W	Q07551	312 aa	Known RBP	11.63	□□□□□ -0.55
SAM1	YLR180W	SUT2	Q12286	268 aa		11.63	□□□□□ -0.55
SAM1	YLR180W	YMR084W	A2P2R3	262 aa		11.62	□□□□□ -0.55
SAM1	YLR180W	PIF1	P07271	859 aa		11.62	□□□□□ -0.55
SAM1	YLR180W	DIT2	P21595	489 aa		11.62	□□□□□ -0.55
SAM1	YLR180W	AIM21	P40563	679 aa		11.62	□□□□□ -0.55
SAM1	YLR180W	PIP2	P52960	996 aa		11.62	□□□□□ -0.55
SAM1	YLR180W	MXR1	P40029	184 aa		11.61	□□□□□ -0.55
SAM1	YLR180W	PRY3	P47033	881 aa		11.61	□□□□□ -0.55
SAM1	YLR180W	BRE5	P53741	515 aa	Known RBP	11.61	□□□□□ -0.55
SAM1	YLR180W	YNL193W	P53870	558 aa		11.61	□□□□□ -0.55
SAM1	YLR180W	FMP30	Q02883	468 aa		11.61	□□□□□ -0.55
SAM1	YLR180W	MET7	Q08645	548 aa		11.61	□□□□□ -0.55
SAM1	YLR180W	AI2	P03876	854 aa		11.6	□□□□□ -0.55
SAM1	YLR180W	PRE10	P21242	288 aa	Known RBP RIP-Chip data	11.6	□□□□□ -0.55	RIP-Chip
SAM1	YLR180W	BOI1	P38041	980 aa	Known RBP	11.6	□□□□□ -0.55
SAM1	YLR180W	POL32	P47110	350 aa		11.6	□□□□□ -0.55
SAM1	YLR180W	MAM3	Q12296	706 aa		11.6	□□□□□ -0.55
SAM1	YLR180W	PER1	P25625	357 aa		11.59	□□□□□ -0.55
SAM1	YLR180W	YJR107W	P47145	328 aa		11.59	□□□□□ -0.55
SAM1	YLR180W	MDM20	Q12387	796 aa	Known RBP	11.59	□□□□□ -0.55
SAM1	YLR180W	AHC1	Q12433	566 aa		11.59	□□□□□ -0.55
SAM1	YLR180W	PKC1	P24583	1151 aa		11.58	□□□□□ -0.56
SAM1	YLR180W	EUG1	P32474	517 aa		11.58	□□□□□ -0.56
SAM1	YLR180W	CST26	P38226	397 aa		11.58	□□□□□ -0.56
SAM1	YLR180W	UBX5	Q06682	500 aa		11.58	□□□□□ -0.56
SAM1	YLR180W	RPS19A	P07280	144 aa	Known RBP	11.57	□□□□□ -0.56
SAM1	YLR180W	RPS19B	P07281	144 aa	Predicted RBP	11.57	□□□□□ -0.56
SAM1	YLR180W	SPB4	P25808	606 aa	Predicted RBP	11.57	□□□□□ -0.56
SAM1	YLR180W	AFG3	P39925	761 aa		11.57	□□□□□ -0.56
SAM1	YLR180W	RPN7	Q06103	429 aa	Known RBP	11.57	□□□□□ -0.56
SAM1	YLR180W	KEL3	Q08979	651 aa	Predicted RBP	11.57	□□□□□ -0.56
SAM1	YLR180W	LAP2	Q10740	671 aa		11.57	□□□□□ -0.56
SAM1	YLR180W	CYB2	P00175	591 aa		11.56	□□□□□ -0.56
SAM1	YLR180W	VMA2	P16140	517 aa	Known RBP	11.56	□□□□□ -0.56
SAM1	YLR180W	SSF1	P38789	453 aa	Predicted RBP	11.56	□□□□□ -0.56
SAM1	YLR180W	ERG12	P07277	443 aa		11.55	□□□□□ -0.56
SAM1	YLR180W	MPH3	P0CE00	602 aa		11.55	□□□□□ -0.56
SAM1	YLR180W	KRS1	P15180	591 aa	Known RBP	11.55	□□□□□ -0.56
SAM1	YLR180W	TIF4631	P39935	952 aa	Known RBP	11.54	□□□□□ -0.56
SAM1	YLR180W	PUF6	Q04373	656 aa	Known RBP	11.54	□□□□□ -0.56
SAM1	YLR180W	GRX7	P38068	203 aa		11.53	□□□□□ -0.56
SAM1	YLR180W	MSC7	P38694	644 aa		11.53	□□□□□ -0.56
SAM1	YLR180W	TUS1	Q06412	1307 aa		11.53	□□□□□ -0.56
SAM1	YLR180W	GPB2	P39717	880 aa		11.52	□□□□□ -0.57
SAM1	YLR180W	YAF9	P53930	226 aa		11.52	□□□□□ -0.57
SAM1	YLR180W	YML037C	Q03703	340 aa		11.52	□□□□□ -0.57
SAM1	YLR180W	HIP1	P06775	603 aa		11.51	□□□□□ -0.57
SAM1	YLR180W	RPC31	P17890	251 aa		11.51	□□□□□ -0.57
SAM1	YLR180W	RGT1	P32862	1170 aa		11.51	□□□□□ -0.57
SAM1	YLR180W	KSP1	P38691	1029 aa	Known RBP	11.51	□□□□□ -0.57
SAM1	YLR180W	BCS1	P32839	456 aa		11.5	□□□□□ -0.57
SAM1	YLR180W	KTR2	P33550	425 aa		11.5	□□□□□ -0.57
SAM1	YLR180W	ECM16	Q04217	1267 aa	Known RBP	11.5	□□□□□ -0.57
SAM1	YLR180W	DUS4	Q06063	367 aa		11.5	□□□□□ -0.57
SAM1	YLR180W	AVT3	P36062	692 aa		11.49	□□□□□ -0.57
SAM1	YLR180W	YNG2	P38806	282 aa	Known RBP	11.49	□□□□□ -0.57
SAM1	YLR180W	PRE8	P23639	250 aa		11.48	□□□□□ -0.57
SAM1	YLR180W	HGH1	P48362	394 aa	Known RBP	11.48	□□□□□ -0.57
SAM1	YLR180W	MIP1	P15801	1254 aa		11.47	□□□□□ -0.57
SAM1	YLR180W	YPL260W	Q08977	551 aa		11.47	□□□□□ -0.57
SAM1	YLR180W	YDR034W-B	Q6Q5X2	51 aa		11.47	□□□□□ -0.57
SAM1	YLR180W	SRM1	P21827	482 aa		11.46	□□□□□ -0.57
SAM1	YLR180W	DBP1	P24784	617 aa	Known RBP	11.46	□□□□□ -0.57
SAM1	YLR180W	SRP40	P32583	406 aa	Predicted RBP	11.46	□□□□□ -0.57
SAM1	YLR180W	GEF1	P37020	779 aa		11.45	□□□□□ -0.58
SAM1	YLR180W	SPO1	P53541	631 aa		11.45	□□□□□ -0.58
SAM1	YLR180W	BUL2	Q03758	920 aa	Known RBP	11.45	□□□□□ -0.58
SAM1	YLR180W	CDC19	P00549	500 aa	Known RBP	11.44	□□□□□ -0.58
SAM1	YLR180W	YKR018C	P36114	725 aa		11.44	□□□□□ -0.58
SAM1	YLR180W	TOM71	P38825	639 aa	Known RBP	11.44	□□□□□ -0.58
SAM1	YLR180W	RMD1	Q03441	430 aa		11.44	□□□□□ -0.58
SAM1	YLR180W	NCB2	Q92317	146 aa		11.44	□□□□□ -0.58
SAM1	YLR180W	GCD7	P32502	381 aa	Predicted RBP	11.43	□□□□□ -0.58
SAM1	YLR180W	ILV3	P39522	585 aa	Known RBP	11.42	□□□□□ -0.58
SAM1	YLR180W	YGR125W	P53273	1036 aa		11.42	□□□□□ -0.58
SAM1	YLR180W	UTR4	P32626	227 aa		11.41	□□□□□ -0.58
SAM1	YLR180W	NPL4	P33755	580 aa		11.41	□□□□□ -0.58
SAM1	YLR180W	NOC2	P39744	710 aa	Known RBP	11.41	□□□□□ -0.58
SAM1	YLR180W	ALD6	P54115	500 aa	Known RBP	11.41	□□□□□ -0.58
SAM1	YLR180W	HEM1	P09950	548 aa	Predicted RBP	11.4	□□□□□ -0.58
SAM1	YLR180W	GRS1	P38088	690 aa	Known RBP	11.4	□□□□□ -0.58
SAM1	YLR180W	NMD2	P38798	1089 aa	Known RBP	11.4	□□□□□ -0.58

Retrieved 100 of 5,963 RNA–protein pairs in 8.7 ms