RNA–Protein interactions for RNA: YLR087C

CSF1, Transcript of Protein required for fermentation at low temperature, yeastyeast

Gene CSF1, Length 8,877 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CSF1YLR087C PMT2P31382 759 aa2.58□□□□□ -2
CSF1YLR087C PEX28P38848 579 aa2.58□□□□□ -2
CSF1YLR087C STU2P46675 888 aa2.58□□□□□ -2
CSF1YLR087C SRB7P47822 140 aa2.58□□□□□ -2
CSF1YLR087C RTC1Q08281 1341 aa2.58□□□□□ -2
CSF1YLR087C YMR084WA2P2R3 262 aa2.58□□□□□ -2
CSF1YLR087C NTG1P31378 399 aa2.58□□□□□ -2
CSF1YLR087C SEG2P34250 1132 aa2.58□□□□□ -2
CSF1YLR087C NPT1P39683 429 aaKnown RBP2.58□□□□□ -2
CSF1YLR087C IAH1P41734 238 aa2.58□□□□□ -2
CSF1YLR087C TAF6P53040 516 aa2.58□□□□□ -2
CSF1YLR087C TLG1Q03322 224 aa2.58□□□□□ -2
CSF1YLR087C ESC2Q06340 456 aa2.58□□□□□ -2
CSF1YLR087C SMC5Q08204 1093 aa2.58□□□□□ -2
CSF1YLR087C APC2Q12440 853 aa2.58□□□□□ -2
CSF1YLR087C SEC7P11075 2009 aaKnown RBP2.58□□□□□ -2
CSF1YLR087C SSE1P32589 693 aaKnown RBP2.58□□□□□ -2
CSF1YLR087C DSF2P38213 736 aa2.58□□□□□ -2
CSF1YLR087C DIP2Q12220 943 aaPredicted RBP2.58□□□□□ -2
CSF1YLR087C UBP6P43593 499 aaKnown RBP2.58□□□□□ -2
CSF1YLR087C TAF4P50105 388 aa2.58□□□□□ -2
CSF1YLR087C KAP114P53067 1004 aa2.58□□□□□ -2
CSF1YLR087C GIM3P53900 129 aa2.58□□□□□ -2
CSF1YLR087C ULP1Q02724 621 aa2.58□□□□□ -2
CSF1YLR087C SLU7Q02775 382 aaKnown RBP2.58□□□□□ -2
CSF1YLR087C HEH2Q03281 663 aa2.58□□□□□ -2
CSF1YLR087C IOC2Q12072 812 aa2.58□□□□□ -2
CSF1YLR087C MRPS28P21771 286 aa2.58□□□□□ -2
CSF1YLR087C NOG1Q02892 647 aaKnown RBP2.58□□□□□ -2
CSF1YLR087C VMA4P22203 233 aaKnown RBP2.58□□□□□ -2
CSF1YLR087C DAL1P32375 460 aa2.58□□□□□ -2
CSF1YLR087C YFL066CP43538 392 aa2.58□□□□□ -2
CSF1YLR087C TMA22P47089 198 aaPredicted RBP2.58□□□□□ -2
CSF1YLR087C RRP9Q06506 573 aaKnown RBP2.58□□□□□ -2
CSF1YLR087C CIR2Q08822 631 aa2.58□□□□□ -2
CSF1YLR087C XKS1P42826 600 aa2.57□□□□□ -2
CSF1YLR087C PIG1Q06216 648 aa2.57□□□□□ -2
CSF1YLR087C MAK11P20484 414 aaKnown RBP2.57□□□□□ -2
CSF1YLR087C RAD26P40352 1085 aa2.57□□□□□ -2
CSF1YLR087C YRF1-1P0CX20 1796 aa2.57□□□□□ -2
CSF1YLR087C YRF1-5P0CX21 1796 aa2.57□□□□□ -2
CSF1YLR087C YRF1-8P0CX22 1796 aa2.57□□□□□ -2
CSF1YLR087C TPD3P31383 635 aa2.57□□□□□ -2
CSF1YLR087C ESL1P40456 1118 aa2.57□□□□□ -2
CSF1YLR087C LOC1P43586 204 aaPredicted RBP2.57□□□□□ -2
CSF1YLR087C SAD1P43589 448 aa2.57□□□□□ -2
CSF1YLR087C ENP2P48234 707 aaKnown RBP2.57□□□□□ -2
CSF1YLR087C YDR476CQ03362 224 aa2.57□□□□□ -2
CSF1YLR087C RSF2P46974 1380 aa2.57□□□□□ -2
CSF1YLR087C FUN30P31380 1131 aa2.57□□□□□ -2
CSF1YLR087C CAF130P53280 1122 aaPredicted RBP2.57□□□□□ -2
CSF1YLR087C PCL8Q08966 492 aa2.57□□□□□ -2
CSF1YLR087C DPH6Q12429 685 aa2.57□□□□□ -2
CSF1YLR087C RKR1Q04781 1562 aa2.57□□□□□ -2
CSF1YLR087C YMR085WP0CF18 432 aa2.57□□□□□ -2
CSF1YLR087C SEC65P29478 273 aa2.57□□□□□ -2
CSF1YLR087C POP7P38291 140 aa2.57□□□□□ -2
CSF1YLR087C RRF1P38771 230 aa2.57□□□□□ -2
CSF1YLR087C TDA11P38854 504 aa2.57□□□□□ -2
CSF1YLR087C KHA1P40309 873 aa2.57□□□□□ -2
CSF1YLR087C YDR341CQ05506 607 aaKnown RBP2.57□□□□□ -2
CSF1YLR087C YPR204WQ08995 1032 aa2.57□□□□□ -2
CSF1YLR087C YIL002W-AQ3E7Z5 69 aa2.57□□□□□ -2
CSF1YLR087C PKC1P24583 1151 aa2.57□□□□□ -2
CSF1YLR087C SMY1P32364 656 aaKnown RBP2.57□□□□□ -2
CSF1YLR087C TOM20P35180 183 aa2.57□□□□□ -2
CSF1YLR087C MED8P38304 223 aa2.57□□□□□ -2
CSF1YLR087C SLX8P40072 274 aa2.57□□□□□ -2
CSF1YLR087C MTC3P53077 123 aa2.57□□□□□ -2
CSF1YLR087C TMA64Q04600 565 aaKnown RBP2.57□□□□□ -2
CSF1YLR087C CLN1P20437 546 aa2.56□□□□□ -2
CSF1YLR087C SPC42P36094 363 aa2.56□□□□□ -2
CSF1YLR087C ECM1P39715 212 aa2.56□□□□□ -2
CSF1YLR087C CIT3P43635 486 aa2.56□□□□□ -2
CSF1YLR087C NUP145P49687 1317 aa2.56□□□□□ -2
CSF1YLR087C GUS1P46655 708 aaKnown RBP RIP-Chip data2.56□□□□□ -2not detected
CSF1YLR087C DNA2P38859 1522 aa2.56□□□□□ -2
CSF1YLR087C SSA1P10591 642 aaKnown RBP2.56□□□□□ -2
CSF1YLR087C SSA2P10592 639 aaKnown RBP2.56□□□□□ -2
CSF1YLR087C PRE10P21242 288 aaKnown RBP RIP-Chip data2.56□□□□□ -2 RIP-Chip
CSF1YLR087C MPE1P35728 441 aaKnown RBP2.56□□□□□ -2
CSF1YLR087C MET1P36150 593 aa2.56□□□□□ -2
CSF1YLR087C PIH1P38768 344 aa2.56□□□□□ -2
CSF1YLR087C DCC1P25559 380 aa2.56□□□□□ -2
CSF1YLR087C MAK5P38112 773 aaPredicted RBP2.56□□□□□ -2
CSF1YLR087C OLA1P38219 394 aaKnown RBP2.56□□□□□ -2
CSF1YLR087C MUM2P38236 366 aa2.56□□□□□ -2
CSF1YLR087C TFG1P41895 735 aaPredicted RBP2.56□□□□□ -2
CSF1YLR087C SMC6Q12749 1114 aa2.56□□□□□ -2
CSF1YLR087C TY4A-HQ6Q5P6 413 aa2.56□□□□□ -2
CSF1YLR087C HXT5P38695 592 aa2.56□□□□□ -2
CSF1YLR087C STP2P38704 541 aa2.56□□□□□ -2
CSF1YLR087C AIM21P40563 679 aa2.56□□□□□ -2
CSF1YLR087C MND2P40577 368 aa2.56□□□□□ -2
CSF1YLR087C OGG1P53397 376 aaPredicted RBP2.56□□□□□ -2
CSF1YLR087C DBP9Q06218 594 aaKnown RBP2.56□□□□□ -2
CSF1YLR087C ICL2Q12031 575 aa2.56□□□□□ -2
CSF1YLR087C USO1P25386 1790 aa2.56□□□□□ -2
CSF1YLR087C UTP10P42945 1769 aaKnown RBP2.56□□□□□ -2
CSF1YLR087C DOP1Q03921 1698 aa2.56□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 55.5 ms