RNA–Protein interactions for RNA: YLR087C

CSF1, Transcript of Protein required for fermentation at low temperature, yeast

Gene CSF1, Length 8,877 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CSF1	YLR087C	PMT2	P31382	759 aa		2.58	□□□□□ -2
CSF1	YLR087C	PEX28	P38848	579 aa		2.58	□□□□□ -2
CSF1	YLR087C	STU2	P46675	888 aa		2.58	□□□□□ -2
CSF1	YLR087C	SRB7	P47822	140 aa		2.58	□□□□□ -2
CSF1	YLR087C	RTC1	Q08281	1341 aa		2.58	□□□□□ -2
CSF1	YLR087C	YMR084W	A2P2R3	262 aa		2.58	□□□□□ -2
CSF1	YLR087C	NTG1	P31378	399 aa		2.58	□□□□□ -2
CSF1	YLR087C	SEG2	P34250	1132 aa		2.58	□□□□□ -2
CSF1	YLR087C	NPT1	P39683	429 aa	Known RBP	2.58	□□□□□ -2
CSF1	YLR087C	IAH1	P41734	238 aa		2.58	□□□□□ -2
CSF1	YLR087C	TAF6	P53040	516 aa		2.58	□□□□□ -2
CSF1	YLR087C	TLG1	Q03322	224 aa		2.58	□□□□□ -2
CSF1	YLR087C	ESC2	Q06340	456 aa		2.58	□□□□□ -2
CSF1	YLR087C	SMC5	Q08204	1093 aa		2.58	□□□□□ -2
CSF1	YLR087C	APC2	Q12440	853 aa		2.58	□□□□□ -2
CSF1	YLR087C	SEC7	P11075	2009 aa	Known RBP	2.58	□□□□□ -2
CSF1	YLR087C	SSE1	P32589	693 aa	Known RBP	2.58	□□□□□ -2
CSF1	YLR087C	DSF2	P38213	736 aa		2.58	□□□□□ -2
CSF1	YLR087C	DIP2	Q12220	943 aa	Predicted RBP	2.58	□□□□□ -2
CSF1	YLR087C	UBP6	P43593	499 aa	Known RBP	2.58	□□□□□ -2
CSF1	YLR087C	TAF4	P50105	388 aa		2.58	□□□□□ -2
CSF1	YLR087C	KAP114	P53067	1004 aa		2.58	□□□□□ -2
CSF1	YLR087C	GIM3	P53900	129 aa		2.58	□□□□□ -2
CSF1	YLR087C	ULP1	Q02724	621 aa		2.58	□□□□□ -2
CSF1	YLR087C	SLU7	Q02775	382 aa	Known RBP	2.58	□□□□□ -2
CSF1	YLR087C	HEH2	Q03281	663 aa		2.58	□□□□□ -2
CSF1	YLR087C	IOC2	Q12072	812 aa		2.58	□□□□□ -2
CSF1	YLR087C	MRPS28	P21771	286 aa		2.58	□□□□□ -2
CSF1	YLR087C	NOG1	Q02892	647 aa	Known RBP	2.58	□□□□□ -2
CSF1	YLR087C	VMA4	P22203	233 aa	Known RBP	2.58	□□□□□ -2
CSF1	YLR087C	DAL1	P32375	460 aa		2.58	□□□□□ -2
CSF1	YLR087C	YFL066C	P43538	392 aa		2.58	□□□□□ -2
CSF1	YLR087C	TMA22	P47089	198 aa	Predicted RBP	2.58	□□□□□ -2
CSF1	YLR087C	RRP9	Q06506	573 aa	Known RBP	2.58	□□□□□ -2
CSF1	YLR087C	CIR2	Q08822	631 aa		2.58	□□□□□ -2
CSF1	YLR087C	XKS1	P42826	600 aa		2.57	□□□□□ -2
CSF1	YLR087C	PIG1	Q06216	648 aa		2.57	□□□□□ -2
CSF1	YLR087C	MAK11	P20484	414 aa	Known RBP	2.57	□□□□□ -2
CSF1	YLR087C	RAD26	P40352	1085 aa		2.57	□□□□□ -2
CSF1	YLR087C	YRF1-1	P0CX20	1796 aa		2.57	□□□□□ -2
CSF1	YLR087C	YRF1-5	P0CX21	1796 aa		2.57	□□□□□ -2
CSF1	YLR087C	YRF1-8	P0CX22	1796 aa		2.57	□□□□□ -2
CSF1	YLR087C	TPD3	P31383	635 aa		2.57	□□□□□ -2
CSF1	YLR087C	ESL1	P40456	1118 aa		2.57	□□□□□ -2
CSF1	YLR087C	LOC1	P43586	204 aa	Predicted RBP	2.57	□□□□□ -2
CSF1	YLR087C	SAD1	P43589	448 aa		2.57	□□□□□ -2
CSF1	YLR087C	ENP2	P48234	707 aa	Known RBP	2.57	□□□□□ -2
CSF1	YLR087C	YDR476C	Q03362	224 aa		2.57	□□□□□ -2
CSF1	YLR087C	RSF2	P46974	1380 aa		2.57	□□□□□ -2
CSF1	YLR087C	FUN30	P31380	1131 aa		2.57	□□□□□ -2
CSF1	YLR087C	CAF130	P53280	1122 aa	Predicted RBP	2.57	□□□□□ -2
CSF1	YLR087C	PCL8	Q08966	492 aa		2.57	□□□□□ -2
CSF1	YLR087C	DPH6	Q12429	685 aa		2.57	□□□□□ -2
CSF1	YLR087C	RKR1	Q04781	1562 aa		2.57	□□□□□ -2
CSF1	YLR087C	YMR085W	P0CF18	432 aa		2.57	□□□□□ -2
CSF1	YLR087C	SEC65	P29478	273 aa		2.57	□□□□□ -2
CSF1	YLR087C	POP7	P38291	140 aa		2.57	□□□□□ -2
CSF1	YLR087C	RRF1	P38771	230 aa		2.57	□□□□□ -2
CSF1	YLR087C	TDA11	P38854	504 aa		2.57	□□□□□ -2
CSF1	YLR087C	KHA1	P40309	873 aa		2.57	□□□□□ -2
CSF1	YLR087C	YDR341C	Q05506	607 aa	Known RBP	2.57	□□□□□ -2
CSF1	YLR087C	YPR204W	Q08995	1032 aa		2.57	□□□□□ -2
CSF1	YLR087C	YIL002W-A	Q3E7Z5	69 aa		2.57	□□□□□ -2
CSF1	YLR087C	PKC1	P24583	1151 aa		2.57	□□□□□ -2
CSF1	YLR087C	SMY1	P32364	656 aa	Known RBP	2.57	□□□□□ -2
CSF1	YLR087C	TOM20	P35180	183 aa		2.57	□□□□□ -2
CSF1	YLR087C	MED8	P38304	223 aa		2.57	□□□□□ -2
CSF1	YLR087C	SLX8	P40072	274 aa		2.57	□□□□□ -2
CSF1	YLR087C	MTC3	P53077	123 aa		2.57	□□□□□ -2
CSF1	YLR087C	TMA64	Q04600	565 aa	Known RBP	2.57	□□□□□ -2
CSF1	YLR087C	CLN1	P20437	546 aa		2.56	□□□□□ -2
CSF1	YLR087C	SPC42	P36094	363 aa		2.56	□□□□□ -2
CSF1	YLR087C	ECM1	P39715	212 aa		2.56	□□□□□ -2
CSF1	YLR087C	CIT3	P43635	486 aa		2.56	□□□□□ -2
CSF1	YLR087C	NUP145	P49687	1317 aa		2.56	□□□□□ -2
CSF1	YLR087C	GUS1	P46655	708 aa	Known RBP RIP-Chip data	2.56	□□□□□ -2	not detected
CSF1	YLR087C	DNA2	P38859	1522 aa		2.56	□□□□□ -2
CSF1	YLR087C	SSA1	P10591	642 aa	Known RBP	2.56	□□□□□ -2
CSF1	YLR087C	SSA2	P10592	639 aa	Known RBP	2.56	□□□□□ -2
CSF1	YLR087C	PRE10	P21242	288 aa	Known RBP RIP-Chip data	2.56	□□□□□ -2	RIP-Chip
CSF1	YLR087C	MPE1	P35728	441 aa	Known RBP	2.56	□□□□□ -2
CSF1	YLR087C	MET1	P36150	593 aa		2.56	□□□□□ -2
CSF1	YLR087C	PIH1	P38768	344 aa		2.56	□□□□□ -2
CSF1	YLR087C	DCC1	P25559	380 aa		2.56	□□□□□ -2
CSF1	YLR087C	MAK5	P38112	773 aa	Predicted RBP	2.56	□□□□□ -2
CSF1	YLR087C	OLA1	P38219	394 aa	Known RBP	2.56	□□□□□ -2
CSF1	YLR087C	MUM2	P38236	366 aa		2.56	□□□□□ -2
CSF1	YLR087C	TFG1	P41895	735 aa	Predicted RBP	2.56	□□□□□ -2
CSF1	YLR087C	SMC6	Q12749	1114 aa		2.56	□□□□□ -2
CSF1	YLR087C	TY4A-H	Q6Q5P6	413 aa		2.56	□□□□□ -2
CSF1	YLR087C	HXT5	P38695	592 aa		2.56	□□□□□ -2
CSF1	YLR087C	STP2	P38704	541 aa		2.56	□□□□□ -2
CSF1	YLR087C	AIM21	P40563	679 aa		2.56	□□□□□ -2
CSF1	YLR087C	MND2	P40577	368 aa		2.56	□□□□□ -2
CSF1	YLR087C	OGG1	P53397	376 aa	Predicted RBP	2.56	□□□□□ -2
CSF1	YLR087C	DBP9	Q06218	594 aa	Known RBP	2.56	□□□□□ -2
CSF1	YLR087C	ICL2	Q12031	575 aa		2.56	□□□□□ -2
CSF1	YLR087C	USO1	P25386	1790 aa		2.56	□□□□□ -2
CSF1	YLR087C	UTP10	P42945	1769 aa	Known RBP	2.56	□□□□□ -2
CSF1	YLR087C	DOP1	Q03921	1698 aa		2.56	□□□□□ -2

Retrieved 100 of 5,963 RNA–protein pairs in 55.7 ms