RNA–Protein interactions for RNA: YLL049W

LDB18, Transcript of Component of the dynactin complex, yeastyeast

Gene LDB18, Length 540 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LDB18YLL049W HIP1P06775 603 aa6.7□□□□□ -1.34
LDB18YLL049W YBR287WP38355 427 aa6.7□□□□□ -1.34
LDB18YLL049W NUG1P40010 520 aaKnown RBP6.7□□□□□ -1.34
LDB18YLL049W YJL007CP47080 104 aa6.7□□□□□ -1.34
LDB18YLL049W VPS70P47161 811 aa6.7□□□□□ -1.34
LDB18YLL049W PUS6P53294 404 aa6.7□□□□□ -1.34
LDB18YLL049W SUT2Q12286 268 aa6.7□□□□□ -1.34
LDB18YLL049W YOR131CQ12486 218 aa6.7□□□□□ -1.34
LDB18YLL049W TOR1P35169 2470 aa6.69□□□□□ -1.34
LDB18YLL049W PRD1P25375 712 aa6.69□□□□□ -1.34
LDB18YLL049W EAP1P36041 632 aaKnown RBP6.69□□□□□ -1.34
LDB18YLL049W YFH7P43591 353 aa6.69□□□□□ -1.34
LDB18YLL049W PSH1Q12161 406 aa6.69□□□□□ -1.34
LDB18YLL049W MDM20Q12387 796 aaKnown RBP6.69□□□□□ -1.34
LDB18YLL049W PMA1P05030 918 aaKnown RBP6.68□□□□□ -1.34
LDB18YLL049W ADP1P25371 1049 aa6.68□□□□□ -1.34
LDB18YLL049W MSC7P38694 644 aa6.68□□□□□ -1.34
LDB18YLL049W MTC5Q03897 1148 aa6.68□□□□□ -1.34
LDB18YLL049W SUP35P05453 685 aaKnown RBP6.67□□□□□ -1.34
LDB18YLL049W RTG1P32607 177 aa6.67□□□□□ -1.34
LDB18YLL049W MCD4P36051 919 aa6.67□□□□□ -1.34
LDB18YLL049W NUP133P36161 1157 aa6.67□□□□□ -1.34
LDB18YLL049W ACA1P39970 489 aa6.67□□□□□ -1.34
LDB18YLL049W MXR1P40029 184 aa6.67□□□□□ -1.34
LDB18YLL049W YNR014WP53719 212 aa6.67□□□□□ -1.34
LDB18YLL049W YOL036WQ08206 761 aa6.67□□□□□ -1.34
LDB18YLL049W SNF3P10870 884 aa6.66□□□□□ -1.34
LDB18YLL049W DIT2P21595 489 aa6.66□□□□□ -1.34
LDB18YLL049W RPT3P33298 428 aaKnown RBP6.66□□□□□ -1.34
LDB18YLL049W VAB2P40003 282 aa6.66□□□□□ -1.34
LDB18YLL049W BRE5P53741 515 aaKnown RBP6.66□□□□□ -1.34
LDB18YLL049W TOR2P32600 2474 aaKnown RBP6.65□□□□□ -1.34
LDB18YLL049W LYS14P40971 790 aa6.65□□□□□ -1.34
LDB18YLL049W GYP7P48365 746 aa6.65□□□□□ -1.34
LDB18YLL049W TUB2P02557 457 aaKnown RBP6.64□□□□□ -1.35
LDB18YLL049W SRS2P12954 1174 aa6.64□□□□□ -1.35
LDB18YLL049W PRE10P21242 288 aaKnown RBP RIP-Chip data6.64□□□□□ -1.35not detected
LDB18YLL049W RTR1P40084 226 aaPredicted RBP6.64□□□□□ -1.35
LDB18YLL049W HXT10P43581 546 aa6.64□□□□□ -1.35
LDB18YLL049W APL6P46682 809 aa6.64□□□□□ -1.35
LDB18YLL049W NCR1Q12200 1170 aa6.64□□□□□ -1.35
LDB18YLL049W UBR2Q07963 1872 aa6.64□□□□□ -1.35
LDB18YLL049W MRP7P12687 371 aa6.63□□□□□ -1.35
LDB18YLL049W BCS1P32839 456 aa6.63□□□□□ -1.35
LDB18YLL049W FAB1P34756 2278 aa6.63□□□□□ -1.35
LDB18YLL049W ECM29P38737 1868 aa6.63□□□□□ -1.35
LDB18YLL049W YJR107WP47145 328 aa6.63□□□□□ -1.35
LDB18YLL049W MAM3Q12296 706 aa6.63□□□□□ -1.35
LDB18YLL049W MAK11P20484 414 aaKnown RBP6.62□□□□□ -1.35
LDB18YLL049W DBP1P24784 617 aaKnown RBP6.62□□□□□ -1.35
LDB18YLL049W YBL028CP38202 106 aa6.62□□□□□ -1.35
LDB18YLL049W KSP1P38691 1029 aaKnown RBP6.62□□□□□ -1.35
LDB18YLL049W VPS29P38759 282 aa6.62□□□□□ -1.35
LDB18YLL049W YMR1P47147 688 aaKnown RBP RIP-Chip data6.62□□□□□ -1.35not detected
LDB18YLL049W THI22Q06490 572 aa6.62□□□□□ -1.35
LDB18YLL049W MET7Q08645 548 aa6.62□□□□□ -1.35
LDB18YLL049W PCL8Q08966 492 aa6.62□□□□□ -1.35
LDB18YLL049W KIN1P13185 1064 aa6.61□□□□□ -1.35
LDB18YLL049W PKC1P24583 1151 aa6.61□□□□□ -1.35
LDB18YLL049W NSG2P53898 299 aa6.61□□□□□ -1.35
LDB18YLL049W RTT109Q07794 436 aa6.61□□□□□ -1.35
LDB18YLL049W MIP1P15801 1254 aa6.6□□□□□ -1.35
LDB18YLL049W KTR2P33550 425 aa6.6□□□□□ -1.35
LDB18YLL049W GLO3P38682 493 aaKnown RBP6.6□□□□□ -1.35
LDB18YLL049W NOP2P40991 618 aaKnown RBP6.6□□□□□ -1.35
LDB18YLL049W YNL035CP53962 389 aaKnown RBP6.6□□□□□ -1.35
LDB18YLL049W SRT1Q03175 343 aa6.6□□□□□ -1.35
LDB18YLL049W UBX5Q06682 500 aa6.6□□□□□ -1.35
LDB18YLL049W SNU66Q12420 587 aaPredicted RBP6.6□□□□□ -1.35
LDB18YLL049W EUG1P32474 517 aa6.59□□□□□ -1.35
LDB18YLL049W SEC61P32915 480 aa6.59□□□□□ -1.35
LDB18YLL049W GRS1P38088 690 aaKnown RBP6.59□□□□□ -1.35
LDB18YLL049W DSF2P38213 736 aa6.59□□□□□ -1.35
LDB18YLL049W UBP12P39538 1254 aa6.59□□□□□ -1.35
LDB18YLL049W SUB2Q07478 446 aaKnown RBP6.59□□□□□ -1.35
LDB18YLL049W VMA1P17255 1071 aaKnown RBP6.58□□□□□ -1.36
LDB18YLL049W PER1P25625 357 aa6.58□□□□□ -1.36
LDB18YLL049W PTK1P36002 662 aaPredicted RBP6.58□□□□□ -1.36
LDB18YLL049W YGR122WP53272 402 aa6.58□□□□□ -1.36
LDB18YLL049W IOC4Q04213 475 aa6.58□□□□□ -1.36
LDB18YLL049W RLF2Q12495 606 aa6.58□□□□□ -1.36
LDB18YLL049W RGT1P32862 1170 aa6.57□□□□□ -1.36
LDB18YLL049W MSH4P40965 878 aaPredicted RBP6.57□□□□□ -1.36
LDB18YLL049W MPP10P47083 593 aaKnown RBP6.57□□□□□ -1.36
LDB18YLL049W DAP1Q12091 152 aa6.57□□□□□ -1.36
LDB18YLL049W NUM1Q00402 2748 aa6.56□□□□□ -1.36
LDB18YLL049W PBS2P08018 668 aa6.56□□□□□ -1.36
LDB18YLL049W NPL4P33755 580 aa6.56□□□□□ -1.36
LDB18YLL049W STS1P38637 319 aa6.56□□□□□ -1.36
LDB18YLL049W YIR042CP40586 236 aa6.56□□□□□ -1.36
LDB18YLL049W YDR524C-BQ3E6R4 66 aa6.56□□□□□ -1.36
LDB18YLL049W HEM1P09950 548 aaPredicted RBP6.55□□□□□ -1.36
LDB18YLL049W KRS1P15180 591 aaKnown RBP6.55□□□□□ -1.36
LDB18YLL049W VMA2P16140 517 aaKnown RBP6.55□□□□□ -1.36
LDB18YLL049W SWC3P31376 625 aa6.55□□□□□ -1.36
LDB18YLL049W HAL5P38970 855 aaKnown RBP6.55□□□□□ -1.36
LDB18YLL049W GPB2P39717 880 aa6.55□□□□□ -1.36
LDB18YLL049W TIF4631P39935 952 aaKnown RBP6.55□□□□□ -1.36
LDB18YLL049W SNU71P53207 620 aaKnown RBP6.55□□□□□ -1.36
LDB18YLL049W HEF3P53978 1044 aaKnown RBP6.55□□□□□ -1.36
Retrieved 100 of 5,963 RNA–protein pairs in 58.4 ms