RNA–Protein interactions for RNA: YKR094C

RPL40B, Transcript of Ubiquitin-ribosomal 60S subunit protein L40B fusion protein, yeast

Gene RPL40B, Length 387 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPL40B	YKR094C	SOG2	Q08817	791 aa		5.19	□□□□□ -1.58
RPL40B	YKR094C	ELM1	P32801	640 aa		5.18	□□□□□ -1.58
RPL40B	YKR094C	POL5	P39985	1022 aa	Known RBP	5.18	□□□□□ -1.58
RPL40B	YKR094C	GUP1	P53154	560 aa		5.18	□□□□□ -1.58
RPL40B	YKR094C	NCE103	P53615	221 aa		5.18	□□□□□ -1.58
RPL40B	YKR094C	FUS1	P11710	512 aa		5.17	□□□□□ -1.58
RPL40B	YKR094C	SEA4	P38164	1038 aa		5.17	□□□□□ -1.58
RPL40B	YKR094C	AIM46	P38885	310 aa		5.17	□□□□□ -1.58
RPL40B	YKR094C	HXT8	P40886	569 aa		5.17	□□□□□ -1.58
RPL40B	YKR094C	PUF6	Q04373	656 aa	Known RBP	5.17	□□□□□ -1.58
RPL40B	YKR094C	KTR2	P33550	425 aa		5.16	□□□□□ -1.58
RPL40B	YKR094C	MAE1	P36013	669 aa	Known RBP	5.16	□□□□□ -1.58
RPL40B	YKR094C	FIR1	P40020	876 aa		5.16	□□□□□ -1.58
RPL40B	YKR094C	LEM3	P42838	414 aa		5.16	□□□□□ -1.58
RPL40B	YKR094C	SRS2	P12954	1174 aa		5.15	□□□□□ -1.59
RPL40B	YKR094C	RGD2	P43556	714 aa		5.15	□□□□□ -1.59
RPL40B	YKR094C	SDH1	Q00711	640 aa		5.15	□□□□□ -1.59
RPL40B	YKR094C	ELG1	Q12050	791 aa		5.15	□□□□□ -1.59
RPL40B	YKR094C	ERS1	P17261	260 aa		5.14	□□□□□ -1.59
RPL40B	YKR094C	MSB1	P21339	1137 aa	Known RBP	5.14	□□□□□ -1.59
RPL40B	YKR094C	NEO1	P40527	1151 aa		5.14	□□□□□ -1.59
RPL40B	YKR094C	SUT1	P53032	299 aa	Known RBP	5.14	□□□□□ -1.59
RPL40B	YKR094C	SPO71	Q03868	1245 aa		5.14	□□□□□ -1.59
RPL40B	YKR094C	YML083C	Q04526	418 aa		5.14	□□□□□ -1.59
RPL40B	YKR094C	RNQ1	P25367	405 aa		5.13	□□□□□ -1.59
RPL40B	YKR094C	YBR287W	P38355	427 aa		5.13	□□□□□ -1.59
RPL40B	YKR094C	DMA2	P53924	522 aa		5.13	□□□□□ -1.59
RPL40B	YKR094C	RPB10	P22139	70 aa		5.12	□□□□□ -1.59
RPL40B	YKR094C	BOI1	P38041	980 aa	Known RBP	5.12	□□□□□ -1.59
RPL40B	YKR094C	YJR124C	P47159	448 aa		5.12	□□□□□ -1.59
RPL40B	YKR094C	KIP3	P53086	805 aa	Known RBP	5.12	□□□□□ -1.59
RPL40B	YKR094C	CWC15	Q03772	175 aa	Known RBP	5.12	□□□□□ -1.59
RPL40B	YKR094C	YNR065C	P53751	1116 aa		5.11	□□□□□ -1.59
RPL40B	YKR094C	HAS1	Q03532	505 aa	Known RBP	5.11	□□□□□ -1.59
RPL40B	YKR094C	TIF6	Q12522	245 aa	Known RBP	5.11	□□□□□ -1.59
RPL40B	YKR094C	GCD1	P09032	578 aa	Predicted RBP	5.1	□□□□□ -1.59
RPL40B	YKR094C	LRG1	P35688	1017 aa		5.1	□□□□□ -1.59
RPL40B	YKR094C	NTA1	P40354	457 aa		5.1	□□□□□ -1.59
RPL40B	YKR094C	PNP1	Q05788	311 aa		5.1	□□□□□ -1.59
RPL40B	YKR094C	GIC2	Q06648	383 aa		5.1	□□□□□ -1.59
RPL40B	YKR094C	APC11	Q12157	165 aa		5.1	□□□□□ -1.59
RPL40B	YKR094C	SEG2	P34250	1132 aa		5.09	□□□□□ -1.59
RPL40B	YKR094C	RAD55	P38953	406 aa		5.09	□□□□□ -1.59
RPL40B	YKR094C	HVG1	P0CE11	249 aa		5.08	□□□□□ -1.6
RPL40B	YKR094C	LEO1	P38439	464 aa		5.08	□□□□□ -1.6
RPL40B	YKR094C	UBP5	P39944	805 aa		5.08	□□□□□ -1.6
RPL40B	YKR094C	NOB1	Q08444	459 aa	Known RBP	5.08	□□□□□ -1.6
RPL40B	YKR094C	GLO4	Q12320	285 aa		5.08	□□□□□ -1.6
RPL40B	YKR094C	RRN6	P32786	894 aa		5.07	□□□□□ -1.6
RPL40B	YKR094C	POL12	P38121	705 aa	Predicted RBP	5.07	□□□□□ -1.6
RPL40B	YKR094C	PYC2	P32327	1180 aa	Known RBP	5.06	□□□□□ -1.6
RPL40B	YKR094C	IRS4	P36115	615 aa	Known RBP	5.06	□□□□□ -1.6
RPL40B	YKR094C	PSY2	P40164	858 aa		5.06	□□□□□ -1.6
RPL40B	YKR094C	FET4	P40988	552 aa		5.06	□□□□□ -1.6
RPL40B	YKR094C	WHI3	P34761	661 aa	Known RBP	5.05	□□□□□ -1.6
RPL40B	YKR094C	YMR074C	Q04773	145 aa		5.05	□□□□□ -1.6
RPL40B	YKR094C	FAR11	P53917	953 aa		5.04	□□□□□ -1.6
RPL40B	YKR094C	SMC1	P32908	1225 aa		5.03	□□□□□ -1.6
RPL40B	YKR094C	GPT2	P36148	743 aa		5.03	□□□□□ -1.6
RPL40B	YKR094C	MMM1	P41800	426 aa		5.03	□□□□□ -1.6
RPL40B	YKR094C	YOR223W	Q12015	292 aa		5.03	□□□□□ -1.6
RPL40B	YKR094C	LSO1	Q3E827	93 aa		5.03	□□□□□ -1.6
RPL40B	YKR094C	DFG16	Q99234	619 aa		5.03	□□□□□ -1.6
RPL40B	YKR094C	SSA4	P22202	642 aa	Known RBP	5.02	□□□□□ -1.61
RPL40B	YKR094C	ECL1	P48235	211 aa		5.02	□□□□□ -1.61
RPL40B	YKR094C	BOL3	P39724	118 aa		5.01	□□□□□ -1.61
RPL40B	YKR094C	NIT1	P40447	199 aa		5.01	□□□□□ -1.61
RPL40B	YKR094C	CIT3	P43635	486 aa		5.01	□□□□□ -1.61
RPL40B	YKR094C	GAS1	P22146	559 aa	Known RBP	5	□□□□□ -1.61
RPL40B	YKR094C	FUR4	P05316	633 aa	Known RBP	4.99	□□□□□ -1.61
RPL40B	YKR094C	YHL008C	P38750	627 aa		4.99	□□□□□ -1.61
RPL40B	YKR094C	CTR9	P89105	1077 aa		4.99	□□□□□ -1.61
RPL40B	YKR094C	DOT1	Q04089	582 aa	Known RBP	4.99	□□□□□ -1.61
RPL40B	YKR094C	HSP78	P33416	811 aa		4.98	□□□□□ -1.61
RPL40B	YKR094C	RCM1	P53972	490 aa		4.98	□□□□□ -1.61
RPL40B	YKR094C	NSI1	Q12457	570 aa		4.98	□□□□□ -1.61
RPL40B	YKR094C	COB	P00163	385 aa		4.97	□□□□□ -1.61
RPL40B	YKR094C	PRP43	P53131	767 aa	Known RBP	4.97	□□□□□ -1.61
RPL40B	YKR094C	YCR015C	P25616	317 aa		4.96	□□□□□ -1.62
RPL40B	YKR094C	YKL222C	P35995	705 aa		4.96	□□□□□ -1.62
RPL40B	YKR094C	OYE3	P41816	400 aa	Predicted RBP	4.96	□□□□□ -1.62
RPL40B	YKR094C	GCV1	P48015	400 aa		4.95	□□□□□ -1.62
RPL40B	YKR094C	CDA2	Q06703	312 aa		4.95	□□□□□ -1.62
RPL40B	YKR094C	YIG1	Q08956	461 aa		4.95	□□□□□ -1.62
RPL40B	YKR094C	YLL054C	Q12244	843 aa		4.95	□□□□□ -1.62
RPL40B	YKR094C	RPS4A	P0CX35	261 aa	Known RBP	4.94	□□□□□ -1.62
RPL40B	YKR094C	RPS4B	P0CX36	261 aa	Known RBP	4.94	□□□□□ -1.62
RPL40B	YKR094C	DUR3	P33413	735 aa		4.94	□□□□□ -1.62
RPL40B	YKR094C	TSA1	P34760	196 aa	Known RBP	4.94	□□□□□ -1.62
RPL40B	YKR094C	RIM11	P38615	370 aa		4.94	□□□□□ -1.62
RPL40B	YKR094C	YOR059C	Q08448	450 aa	Known RBP	4.94	□□□□□ -1.62
RPL40B	YKR094C	CMR1	Q12510	522 aa	Known RBP	4.94	□□□□□ -1.62
RPL40B	YKR094C	NPR1	P22211	790 aa		4.93	□□□□□ -1.62
RPL40B	YKR094C	EAR1	Q03212	550 aa		4.93	□□□□□ -1.62
RPL40B	YKR094C	ESC8	Q08119	714 aa		4.93	□□□□□ -1.62
RPL40B	YKR094C	HTS1	P07263	546 aa	Known RBP	4.92	□□□□□ -1.62
RPL40B	YKR094C	MSH4	P40965	878 aa	Predicted RBP	4.92	□□□□□ -1.62
RPL40B	YKR094C	TAF1	P46677	1066 aa		4.92	□□□□□ -1.62
RPL40B	YKR094C	ALG6	Q12001	544 aa	Known RBP	4.92	□□□□□ -1.62
RPL40B	YKR094C	ADP1	P25371	1049 aa		4.9	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 47.5 ms