RNA–Protein interactions for RNA: YKR039W

GAP1, Transcript of General amino acid permease, yeast

Gene GAP1, Length 1,809 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
GAP1	YKR039W	PIP2	P52960	996 aa		11.39	□□□□□ -0.59
GAP1	YKR039W	PEX14	P53112	341 aa		11.39	□□□□□ -0.59
GAP1	YKR039W	ECM23	Q02710	187 aa		11.39	□□□□□ -0.59
GAP1	YKR039W	EST2	Q06163	884 aa		11.39	□□□□□ -0.59
GAP1	YKR039W	CHO2	P05374	869 aa	Known RBP	11.39	□□□□□ -0.59
GAP1	YKR039W	ARG82	P07250	355 aa		11.39	□□□□□ -0.59
GAP1	YKR039W	PRX1	P34227	261 aa	Known RBP	11.39	□□□□□ -0.59
GAP1	YKR039W	HYR1	P40581	163 aa	Known RBP	11.39	□□□□□ -0.59
GAP1	YKR039W	ENT3	P47160	408 aa		11.39	□□□□□ -0.59
GAP1	YKR039W	UFD2	P54860	961 aa		11.39	□□□□□ -0.59
GAP1	YKR039W	RPS15	Q01855	142 aa	Known RBP	11.39	□□□□□ -0.59
GAP1	YKR039W	GAS5	Q08193	484 aa		11.39	□□□□□ -0.59
GAP1	YKR039W	ELG1	Q12050	791 aa		11.38	□□□□□ -0.59
GAP1	YKR039W	RTS1	P38903	757 aa		11.37	□□□□□ -0.59
GAP1	YKR039W	DPL1	Q05567	589 aa		11.37	□□□□□ -0.59
GAP1	YKR039W	MRD1	Q06106	887 aa	Known RBP	11.37	□□□□□ -0.59
GAP1	YKR039W	HKR1	P41809	1802 aa		11.37	□□□□□ -0.59
GAP1	YKR039W	CIR1	P42940	261 aa		11.37	□□□□□ -0.59
GAP1	YKR039W	APL6	P46682	809 aa		11.37	□□□□□ -0.59
GAP1	YKR039W	CPA2	P03965	1118 aa	Known RBP	11.36	□□□□□ -0.59
GAP1	YKR039W	BUD6	P41697	788 aa		11.36	□□□□□ -0.59
GAP1	YKR039W	PUS6	P53294	404 aa		11.36	□□□□□ -0.59
GAP1	YKR039W	YPL150W	Q12152	901 aa		11.36	□□□□□ -0.59
GAP1	YKR039W	YLR407W	Q06070	228 aa		11.35	□□□□□ -0.59
GAP1	YKR039W	RRG1	Q12167	365 aa	Predicted RBP	11.35	□□□□□ -0.59
GAP1	YKR039W	KEX1	P09620	729 aa		11.35	□□□□□ -0.59
GAP1	YKR039W	UBP10	P53874	792 aa	Predicted RBP	11.35	□□□□□ -0.59
GAP1	YKR039W	PEX19	Q07418	342 aa		11.35	□□□□□ -0.59
GAP1	YKR039W	ACK1	Q07622	623 aa	Predicted RBP	11.35	□□□□□ -0.59
GAP1	YKR039W	TOP1	P04786	769 aa		11.34	□□□□□ -0.59
GAP1	YKR039W	MPH3	P0CE00	602 aa		11.34	□□□□□ -0.59
GAP1	YKR039W	YPL260W	Q08977	551 aa		11.34	□□□□□ -0.59
GAP1	YKR039W	RPS7A	P26786	190 aa	Known RBP	11.33	□□□□□ -0.6
GAP1	YKR039W	ANP1	P32629	500 aa		11.33	□□□□□ -0.6
GAP1	YKR039W	YHL050C	P38721	697 aa		11.33	□□□□□ -0.6
GAP1	YKR039W	SHC1	P39000	512 aa		11.33	□□□□□ -0.6
GAP1	YKR039W	EPL1	P43572	832 aa		11.33	□□□□□ -0.6
GAP1	YKR039W	NSG2	P53898	299 aa		11.33	□□□□□ -0.6
GAP1	YKR039W	RPS9B	P05755	195 aa	Known RBP	11.32	□□□□□ -0.6
GAP1	YKR039W	PFK2	P16862	959 aa	Known RBP RIP-Chip data	11.32	□□□□□ -0.6	not detected
GAP1	YKR039W	RFC5	P38251	354 aa		11.32	□□□□□ -0.6
GAP1	YKR039W	RSM25	P40496	264 aa		11.32	□□□□□ -0.6
GAP1	YKR039W	HDA1	P53973	706 aa		11.32	□□□□□ -0.6
GAP1	YKR039W	DIP2	Q12220	943 aa	Predicted RBP	11.32	□□□□□ -0.6
GAP1	YKR039W	AIM44	Q99299	758 aa		11.32	□□□□□ -0.6
GAP1	YKR039W	AFG2	P32794	780 aa		11.32	□□□□□ -0.6
GAP1	YKR039W	MYO3	P36006	1272 aa		11.32	□□□□□ -0.6
GAP1	YKR039W	TFC6	Q06339	672 aa		11.32	□□□□□ -0.6
GAP1	YKR039W	MBR1	P23493	339 aa		11.31	□□□□□ -0.6
GAP1	YKR039W	RDS1	P25611	832 aa		11.31	□□□□□ -0.6
GAP1	YKR039W	ELM1	P32801	640 aa		11.31	□□□□□ -0.6
GAP1	YKR039W	MAL33	P38157	468 aa		11.31	□□□□□ -0.6
GAP1	YKR039W	PTK2	P47116	818 aa	Known RBP	11.31	□□□□□ -0.6
GAP1	YKR039W	RAD61	Q99359	647 aa		11.31	□□□□□ -0.6
GAP1	YKR039W	AKR1	P39010	764 aa		11.3	□□□□□ -0.6
GAP1	YKR039W	VID27	P40157	782 aa		11.3	□□□□□ -0.6
GAP1	YKR039W	APC11	Q12157	165 aa		11.3	□□□□□ -0.6
GAP1	YKR039W	FLO1	P32768	1537 aa		11.3	□□□□□ -0.6
GAP1	YKR039W	KNS1	P32350	737 aa	Predicted RBP	11.3	□□□□□ -0.6
GAP1	YKR039W	RVS167	P39743	482 aa	Known RBP	11.3	□□□□□ -0.6
GAP1	YKR039W	CCT5	P40413	562 aa	Known RBP	11.3	□□□□□ -0.6
GAP1	YKR039W	KEL3	Q08979	651 aa	Predicted RBP	11.3	□□□□□ -0.6
GAP1	YKR039W	HCA4	P20448	770 aa	Known RBP	11.29	□□□□□ -0.6
GAP1	YKR039W	RPN12	P32496	274 aa		11.29	□□□□□ -0.6
GAP1	YKR039W	FLO11	P08640	1367 aa		11.29	□□□□□ -0.6
GAP1	YKR039W	HSP82	P02829	709 aa	Known RBP	11.28	□□□□□ -0.6
GAP1	YKR039W	CBP3	P21560	335 aa		11.28	□□□□□ -0.6
GAP1	YKR039W	DIT2	P21595	489 aa		11.28	□□□□□ -0.6
GAP1	YKR039W	MAK31	P23059	88 aa		11.28	□□□□□ -0.6
GAP1	YKR039W	RIT1	P23796	513 aa		11.28	□□□□□ -0.6
GAP1	YKR039W	ALG2	P43636	503 aa		11.28	□□□□□ -0.6
GAP1	YKR039W	BMH2	P34730	273 aa	Known RBP	11.28	□□□□□ -0.6
GAP1	YKR039W	MAL31	P38156	614 aa		11.28	□□□□□ -0.6
GAP1	YKR039W	MSH4	P40965	878 aa	Predicted RBP	11.28	□□□□□ -0.6
GAP1	YKR039W	CRF1	Q04930	467 aa		11.28	□□□□□ -0.6
GAP1	YKR039W	ETT1	Q08421	412 aa	Known RBP	11.28	□□□□□ -0.6
GAP1	YKR039W	ISW2	Q08773	1120 aa		11.28	□□□□□ -0.6
GAP1	YKR039W	PGI1	P12709	554 aa	Known RBP	11.27	□□□□□ -0.61
GAP1	YKR039W	FRS2	P15625	503 aa	Known RBP	11.27	□□□□□ -0.61
GAP1	YKR039W	MSM1	P22438	575 aa		11.27	□□□□□ -0.61
GAP1	YKR039W	RPN10	P38886	268 aa	Known RBP	11.27	□□□□□ -0.61
GAP1	YKR039W	KRE33	P53914	1056 aa	Known RBP	11.27	□□□□□ -0.61
GAP1	YKR039W	SWI4	P25302	1093 aa	Known RBP	11.26	□□□□□ -0.61
GAP1	YKR039W	VPS8	P39702	1274 aa		11.26	□□□□□ -0.61
GAP1	YKR039W	PIL1	P53252	339 aa	Known RBP	11.26	□□□□□ -0.61
GAP1	YKR039W	PRO3	P32263	286 aa	Known RBP	11.25	□□□□□ -0.61
GAP1	YKR039W	DID4	P36108	232 aa		11.25	□□□□□ -0.61
GAP1	YKR039W	SEN54	Q02825	467 aa	Predicted RBP	11.25	□□□□□ -0.61
GAP1	YKR039W	MYO5	Q04439	1219 aa	Known RBP	11.25	□□□□□ -0.61
GAP1	YKR039W	ATG20	Q07528	640 aa		11.25	□□□□□ -0.61
GAP1	YKR039W	PCL8	Q08966	492 aa		11.25	□□□□□ -0.61
GAP1	YKR039W	CSM2	P40465	213 aa		11.25	□□□□□ -0.61
GAP1	YKR039W	YJL171C	P46992	396 aa		11.25	□□□□□ -0.61
GAP1	YKR039W	YOR111W	Q99210	232 aa		11.25	□□□□□ -0.61
GAP1	YKR039W	RNR3	P21672	869 aa	Known RBP	11.24	□□□□□ -0.61
GAP1	YKR039W	RSC1	P53236	928 aa		11.24	□□□□□ -0.61
GAP1	YKR039W	RPT6	Q01939	405 aa	Known RBP	11.24	□□□□□ -0.61
GAP1	YKR039W	DDP1	Q99321	188 aa	Known RBP	11.24	□□□□□ -0.61
GAP1	YKR039W	RKM3	P38222	552 aa		11.23	□□□□□ -0.61
GAP1	YKR039W	GDE1	Q02979	1223 aa		11.23	□□□□□ -0.61

Retrieved 100 of 5,963 RNA–protein pairs in 38.4 ms