RNA–Protein interactions for RNA: YJL154C

VPS35, Transcript of Endosomal subunit of membrane-associated retromer complex, yeastyeast

Gene VPS35, Length 2,835 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS35YJL154C SPR28Q04921 423 aa3.2□□□□□ -1.9
VPS35YJL154C DIT1P21623 536 aa3.2□□□□□ -1.9
VPS35YJL154C MET22P32179 357 aa3.2□□□□□ -1.9
VPS35YJL154C MRPS18P42847 217 aa3.2□□□□□ -1.9
VPS35YJL154C ROG3P43602 733 aa3.2□□□□□ -1.9
VPS35YJL154C ITC1P53125 1264 aa3.2□□□□□ -1.9
VPS35YJL154C MON1P53129 644 aa3.2□□□□□ -1.9
VPS35YJL154C YGR122WP53272 402 aa3.2□□□□□ -1.9
VPS35YJL154C SRC1Q03707 834 aa3.2□□□□□ -1.9
VPS35YJL154C EMG1Q06287 252 aaKnown RBP3.2□□□□□ -1.9
VPS35YJL154C FLP1P03870 423 aa3.2□□□□□ -1.9
VPS35YJL154C RSM26P47141 266 aa3.2□□□□□ -1.9
VPS35YJL154C PRP40P33203 583 aaKnown RBP3.19□□□□□ -1.9
VPS35YJL154C PET112P33893 541 aa3.19□□□□□ -1.9
VPS35YJL154C ADE12P80210 433 aaKnown RBP3.19□□□□□ -1.9
VPS35YJL154C MCD1Q12158 566 aa3.19□□□□□ -1.9
VPS35YJL154C YNR040WP53736 256 aa3.19□□□□□ -1.9
VPS35YJL154C PMT7Q06644 662 aa3.19□□□□□ -1.9
VPS35YJL154C MCM5P29496 775 aaKnown RBP3.18□□□□□ -1.9
VPS35YJL154C PYC2P32327 1180 aaKnown RBP3.18□□□□□ -1.9
VPS35YJL154C NAB2P32505 525 aaKnown RBP RIP-Chip data3.18□□□□□ -1.9not detected
VPS35YJL154C ATG14P38270 344 aa3.18□□□□□ -1.9
VPS35YJL154C CUZ1P53899 274 aa3.18□□□□□ -1.9
VPS35YJL154C TY1A-MR1Q04215 440 aa3.18□□□□□ -1.9
VPS35YJL154C RAD2P07276 1031 aa3.18□□□□□ -1.9
VPS35YJL154C SHU2P38957 223 aa3.18□□□□□ -1.9
VPS35YJL154C RVS167P39743 482 aaKnown RBP3.18□□□□□ -1.9
VPS35YJL154C CAF120P53836 1060 aa3.18□□□□□ -1.9
VPS35YJL154C NAM8Q00539 523 aaKnown RBP3.18□□□□□ -1.9
VPS35YJL154C FUS1P11710 512 aa3.17□□□□□ -1.9
VPS35YJL154C CYC8P14922 966 aa3.17□□□□□ -1.9
VPS35YJL154C YER156CP40093 338 aaKnown RBP3.17□□□□□ -1.9
VPS35YJL154C IDI1P15496 288 aa3.17□□□□□ -1.9
VPS35YJL154C FAA3P39002 694 aa3.17□□□□□ -1.9
VPS35YJL154C NUT1P53114 1132 aa3.16□□□□□ -1.9
VPS35YJL154C YIR007WP40566 764 aa3.16□□□□□ -1.9
VPS35YJL154C WRS1Q12109 432 aaKnown RBP3.16□□□□□ -1.9
VPS35YJL154C YDR461C-AQ2V2P7 80 aa3.16□□□□□ -1.9
VPS35YJL154C HXK1P04806 485 aaKnown RBP3.15□□□□□ -1.9
VPS35YJL154C RAD27P26793 382 aa3.15□□□□□ -1.9
VPS35YJL154C MNR2P35724 969 aa3.15□□□□□ -1.9
VPS35YJL154C VAC8P39968 578 aa3.15□□□□□ -1.9
VPS35YJL154C NEO1P40527 1151 aa3.15□□□□□ -1.9
VPS35YJL154C NNF1P47149 201 aa3.15□□□□□ -1.9
VPS35YJL154C PEX13P80667 386 aa3.15□□□□□ -1.9
VPS35YJL154C ULP1Q02724 621 aa3.15□□□□□ -1.9
VPS35YJL154C MSH6Q03834 1242 aa3.15□□□□□ -1.9
VPS35YJL154C YKL077WP36081 392 aa3.15□□□□□ -1.91
VPS35YJL154C FET4P40988 552 aa3.15□□□□□ -1.91
VPS35YJL154C ALD6P54115 500 aaKnown RBP3.15□□□□□ -1.91
VPS35YJL154C INP51P40559 946 aaKnown RBP3.15□□□□□ -1.91
VPS35YJL154C ADI1Q03677 179 aa3.15□□□□□ -1.91
VPS35YJL154C MRL1Q06815 381 aa3.15□□□□□ -1.91
VPS35YJL154C DNA2P38859 1522 aa3.14□□□□□ -1.91
VPS35YJL154C PRK1P40494 810 aa3.14□□□□□ -1.91
VPS35YJL154C YAF9P53930 226 aa3.14□□□□□ -1.91
VPS35YJL154C TY1A-DR2Q03964 440 aaKnown RBP3.14□□□□□ -1.91
VPS35YJL154C KOG1P38873 1557 aa3.14□□□□□ -1.91
VPS35YJL154C KRI1P42846 591 aaKnown RBP3.14□□□□□ -1.91
VPS35YJL154C LYS5P50113 272 aa3.14□□□□□ -1.91
VPS35YJL154C CTR9P89105 1077 aa3.14□□□□□ -1.91
VPS35YJL154C YPL109CQ02981 657 aa3.14□□□□□ -1.91
VPS35YJL154C NPR1P22211 790 aa3.13□□□□□ -1.91
VPS35YJL154C ACO2P39533 789 aa3.13□□□□□ -1.91
VPS35YJL154C VPS16Q03308 798 aa3.13□□□□□ -1.91
VPS35YJL154C SYT1Q06836 1226 aa3.13□□□□□ -1.91
VPS35YJL154C PIN2Q12057 282 aa3.13□□□□□ -1.91
VPS35YJL154C UGA4P32837 571 aa3.13□□□□□ -1.91
VPS35YJL154C PEX28P38848 579 aa3.13□□□□□ -1.91
VPS35YJL154C SOK2P53438 785 aaPredicted RBP3.13□□□□□ -1.91
VPS35YJL154C ALD3P54114 506 aa3.13□□□□□ -1.91
VPS35YJL154C TOS4Q06266 489 aa3.13□□□□□ -1.91
VPS35YJL154C GLO4Q12320 285 aa3.13□□□□□ -1.91
VPS35YJL154C COBP00163 385 aa3.12□□□□□ -1.91
VPS35YJL154C MSC7P38694 644 aa3.12□□□□□ -1.91
VPS35YJL154C XKS1P42826 600 aa3.12□□□□□ -1.91
VPS35YJL154C LEM3P42838 414 aa3.12□□□□□ -1.91
VPS35YJL154C LSB6P42951 607 aa3.12□□□□□ -1.91
VPS35YJL154C YJR124CP47159 448 aa3.12□□□□□ -1.91
VPS35YJL154C GUP1P53154 560 aa3.12□□□□□ -1.91
VPS35YJL154C GDE1Q02979 1223 aa3.12□□□□□ -1.91
VPS35YJL154C YMR074CQ04773 145 aa3.12□□□□□ -1.91
VPS35YJL154C CMR1Q12510 522 aaKnown RBP3.12□□□□□ -1.91
VPS35YJL154C ALG14P38242 237 aa3.12□□□□□ -1.91
VPS35YJL154C MTR4P47047 1073 aaKnown RBP3.12□□□□□ -1.91
VPS35YJL154C BIO5P53744 561 aaKnown RBP3.12□□□□□ -1.91
VPS35YJL154C YGR035CP53222 116 aa3.11□□□□□ -1.91
VPS35YJL154C SOG2Q08817 791 aa3.11□□□□□ -1.91
VPS35YJL154C RTT10Q08924 1013 aa3.11□□□□□ -1.91
VPS35YJL154C TMA46Q12000 345 aaKnown RBP3.11□□□□□ -1.91
VPS35YJL154C CCP1P00431 361 aa3.11□□□□□ -1.91
VPS35YJL154C SAC7P17121 654 aa3.11□□□□□ -1.91
VPS35YJL154C MSH3P25336 1018 aa3.11□□□□□ -1.91
VPS35YJL154C RIM11P38615 370 aa3.11□□□□□ -1.91
VPS35YJL154C SPO71Q03868 1245 aa3.11□□□□□ -1.91
VPS35YJL154C MAG2Q06436 670 aaKnown RBP3.11□□□□□ -1.91
VPS35YJL154C FAL1Q12099 399 aaKnown RBP3.11□□□□□ -1.91
VPS35YJL154C YLL054CQ12244 843 aa3.11□□□□□ -1.91
VPS35YJL154C DED1P06634 604 aaKnown RBP3.11□□□□□ -1.91
VPS35YJL154C PDC5P16467 563 aaKnown RBP3.11□□□□□ -1.91
Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms