RNA–Protein interactions for RNA: YIR001C

SGN1, Transcript of Cytoplasmic RNA-binding protein, yeast

Gene SGN1, Length 753 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SGN1	YIR001C	RAT1	Q02792	1006 aa	Known RBP	4.89	□□□□□ -1.63
SGN1	YIR001C	SYH1	Q02875	849 aa	Known RBP	4.89	□□□□□ -1.63
SGN1	YIR001C	YDR444W	Q04093	687 aa		4.89	□□□□□ -1.63
SGN1	YIR001C	RTG2	P32608	588 aa	Known RBP	4.88	□□□□□ -1.63
SGN1	YIR001C	GUA1	P38625	525 aa	Known RBP	4.88	□□□□□ -1.63
SGN1	YIR001C	PAP2	P53632	584 aa	Known RBP	4.88	□□□□□ -1.63
SGN1	YIR001C	ERO1	Q03103	563 aa		4.88	□□□□□ -1.63
SGN1	YIR001C	BDF2	Q07442	638 aa		4.88	□□□□□ -1.63
SGN1	YIR001C	RAD59	Q12223	238 aa		4.88	□□□□□ -1.63
SGN1	YIR001C	BRL1	P38770	471 aa		4.87	□□□□□ -1.63
SGN1	YIR001C	YGL082W	P53155	381 aa		4.87	□□□□□ -1.63
SGN1	YIR001C	AOS1	Q06624	347 aa		4.87	□□□□□ -1.63
SGN1	YIR001C	DIB1	Q06819	143 aa	Predicted RBP	4.87	□□□□□ -1.63
SGN1	YIR001C	PHM7	Q12252	991 aa		4.87	□□□□□ -1.63
SGN1	YIR001C	YLR278C	Q05854	1341 aa		4.87	□□□□□ -1.63
SGN1	YIR001C	CAF20	P12962	161 aa	Known RBP	4.86	□□□□□ -1.63
SGN1	YIR001C	MSM1	P22438	575 aa		4.86	□□□□□ -1.63
SGN1	YIR001C	KCC4	P25389	1037 aa		4.86	□□□□□ -1.63
SGN1	YIR001C	TOM1	Q03280	3268 aa		4.85	□□□□□ -1.63
SGN1	YIR001C	KIP2	P28743	706 aa		4.85	□□□□□ -1.63
SGN1	YIR001C	AKL1	P38080	1108 aa	Known RBP	4.85	□□□□□ -1.63
SGN1	YIR001C	GRX6	Q12438	231 aa		4.85	□□□□□ -1.63
SGN1	YIR001C	HKR1	P41809	1802 aa		4.85	□□□□□ -1.63
SGN1	YIR001C	ETP1	P38748	585 aa	Known RBP	4.84	□□□□□ -1.63
SGN1	YIR001C	NAF1	P53919	492 aa	Known RBP	4.84	□□□□□ -1.63
SGN1	YIR001C	PDS5	Q04264	1277 aa		4.84	□□□□□ -1.63
SGN1	YIR001C	ALE1	Q08548	619 aa		4.84	□□□□□ -1.63
SGN1	YIR001C	SSP2	Q08646	371 aa		4.84	□□□□□ -1.63
SGN1	YIR001C	GSC2	P40989	1895 aa		4.83	□□□□□ -1.64
SGN1	YIR001C	MAK16	P10962	306 aa	Predicted RBP	4.83	□□□□□ -1.64
SGN1	YIR001C	AFT1	P22149	690 aa		4.83	□□□□□ -1.64
SGN1	YIR001C	VAC17	P25591	423 aa		4.83	□□□□□ -1.64
SGN1	YIR001C	SPT5	P27692	1063 aa	Known RBP	4.83	□□□□□ -1.64
SGN1	YIR001C	FRD1	P32614	470 aa	Known RBP	4.83	□□□□□ -1.64
SGN1	YIR001C	IXR1	P33417	597 aa		4.83	□□□□□ -1.64
SGN1	YIR001C	YIL089W	P40500	205 aa		4.83	□□□□□ -1.64
SGN1	YIR001C	HST3	P53687	447 aa		4.83	□□□□□ -1.64
SGN1	YIR001C	POM152	P39685	1337 aa		4.82	□□□□□ -1.64
SGN1	YIR001C	FET4	P40988	552 aa		4.82	□□□□□ -1.64
SGN1	YIR001C	MRT4	P33201	236 aa	Known RBP	4.81	□□□□□ -1.64
SGN1	YIR001C	NTH2	P35172	780 aa		4.81	□□□□□ -1.64
SGN1	YIR001C	PEA2	P40091	420 aa		4.81	□□□□□ -1.64
SGN1	YIR001C	TIM50	Q02776	476 aa		4.81	□□□□□ -1.64
SGN1	YIR001C	MET32	Q12041	191 aa		4.81	□□□□□ -1.64
SGN1	YIR001C	TIF6	Q12522	245 aa	Known RBP	4.81	□□□□□ -1.64
SGN1	YIR001C	TEC1	P18412	486 aa		4.8	□□□□□ -1.64
SGN1	YIR001C	UGA3	P26370	528 aa		4.8	□□□□□ -1.64
SGN1	YIR001C	ASH1	P34233	588 aa		4.8	□□□□□ -1.64
SGN1	YIR001C	YBL036C	P38197	257 aa		4.8	□□□□□ -1.64
SGN1	YIR001C	TRM44	Q02648	567 aa	Known RBP	4.8	□□□□□ -1.64
SGN1	YIR001C	CWC15	Q03772	175 aa	Known RBP	4.8	□□□□□ -1.64
SGN1	YIR001C	SYF1	Q04048	859 aa	Predicted RBP	4.8	□□□□□ -1.64
SGN1	YIR001C	NSE3	Q05541	303 aa		4.8	□□□□□ -1.64
SGN1	YIR001C	LCB5	Q06147	687 aa	Known RBP	4.8	□□□□□ -1.64
SGN1	YIR001C	HAT1	Q12341	374 aa		4.8	□□□□□ -1.64
SGN1	YIR001C	SRF1	Q12516	437 aa		4.8	□□□□□ -1.64
SGN1	YIR001C	MAC1	P35192	417 aa		4.79	□□□□□ -1.64
SGN1	YIR001C	FIG4	P42837	879 aa		4.79	□□□□□ -1.64
SGN1	YIR001C	EMP47	P43555	445 aa		4.79	□□□□□ -1.64
SGN1	YIR001C	TFB3	Q03290	321 aa		4.79	□□□□□ -1.64
SGN1	YIR001C	GUT2	P32191	649 aa		4.78	□□□□□ -1.64
SGN1	YIR001C	APL2	P36000	726 aa	Predicted RBP	4.78	□□□□□ -1.64
SGN1	YIR001C	YGR117C	P53270	476 aa		4.78	□□□□□ -1.64
SGN1	YIR001C	UBP16	Q02863	499 aa		4.78	□□□□□ -1.64
SGN1	YIR001C	VPS64	Q03944	604 aa		4.78	□□□□□ -1.64
SGN1	YIR001C	FIG2	P25653	1609 aa		4.78	□□□□□ -1.64
SGN1	YIR001C	HPR1	P17629	752 aa	Known RBP	4.77	□□□□□ -1.65
SGN1	YIR001C	BSD2	P38356	321 aa		4.77	□□□□□ -1.65
SGN1	YIR001C	CRF1	Q04930	467 aa		4.77	□□□□□ -1.65
SGN1	YIR001C	AFG2	P32794	780 aa		4.76	□□□□□ -1.65
SGN1	YIR001C	EMW1	P42842	904 aa	Known RBP	4.76	□□□□□ -1.65
SGN1	YIR001C	YPP1	P46951	817 aa		4.76	□□□□□ -1.65
SGN1	YIR001C	VPS4	P52917	437 aa		4.76	□□□□□ -1.65
SGN1	YIR001C	NCS6	P53088	359 aa		4.76	□□□□□ -1.65
SGN1	YIR001C	YNL050C	P53952	270 aa		4.76	□□□□□ -1.65
SGN1	YIR001C	SEN54	Q02825	467 aa	Predicted RBP	4.76	□□□□□ -1.65
SGN1	YIR001C	YPR204W	Q08995	1032 aa		4.76	□□□□□ -1.65
SGN1	YIR001C	SSK22	P25390	1331 aa	Predicted RBP	4.75	□□□□□ -1.65
SGN1	YIR001C	ZDS1	P50111	915 aa	Known RBP	4.75	□□□□□ -1.65
SGN1	YIR001C	PKH1	Q03407	766 aa		4.75	□□□□□ -1.65
SGN1	YIR001C	STE20	Q03497	939 aa	Known RBP	4.75	□□□□□ -1.65
SGN1	YIR001C	FRA1	Q07825	749 aa		4.75	□□□□□ -1.65
SGN1	YIR001C	RRG1	Q12167	365 aa	Predicted RBP	4.75	□□□□□ -1.65
SGN1	YIR001C	CSR2	Q12734	1121 aa		4.75	□□□□□ -1.65
SGN1	YIR001C	HVG1	P0CE11	249 aa		4.74	□□□□□ -1.65
SGN1	YIR001C	RRT6	P53117	311 aa	Predicted RBP	4.74	□□□□□ -1.65
SGN1	YIR001C	ZDS2	P54786	942 aa		4.74	□□□□□ -1.65
SGN1	YIR001C	YPR084W	Q06821	456 aa		4.74	□□□□□ -1.65
SGN1	YIR001C	RPP2B	P02400	110 aa	Known RBP	4.73	□□□□□ -1.65
SGN1	YIR001C	PAM1	P37304	830 aa	Known RBP	4.73	□□□□□ -1.65
SGN1	YIR001C	PNT1	P38969	423 aa		4.73	□□□□□ -1.65
SGN1	YIR001C	POL5	P39985	1022 aa	Known RBP	4.73	□□□□□ -1.65
SGN1	YIR001C	ATG3	P40344	310 aa		4.73	□□□□□ -1.65
SGN1	YIR001C	YJR115W	P47152	169 aa		4.73	□□□□□ -1.65
SGN1	YIR001C	GAS5	Q08193	484 aa		4.73	□□□□□ -1.65
SGN1	YIR001C	ARG82	P07250	355 aa		4.72	□□□□□ -1.65
SGN1	YIR001C	CBP1	P07252	654 aa		4.72	□□□□□ -1.65
SGN1	YIR001C	PKC1	P24583	1151 aa		4.72	□□□□□ -1.65
SGN1	YIR001C	KRE2	P27809	442 aa		4.72	□□□□□ -1.65
SGN1	YIR001C	STV1	P37296	890 aa		4.72	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 15.6 ms