RNA–Protein interactions for RNA: YHR120W

MSH1, Transcript of DNA-binding protein of the mitochondria, yeastyeast

Gene MSH1, Length 2,880 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH1YHR120W PIP2P52960 996 aa5.98□□□□□ -1.45
MSH1YHR120W CST9Q06032 482 aa5.98□□□□□ -1.45
MSH1YHR120W PFK2P16862 959 aaKnown RBP RIP-Chip data5.97□□□□□ -1.45not detected
MSH1YHR120W VPS24P36095 224 aaKnown RBP5.97□□□□□ -1.45
MSH1YHR120W PMA1P05030 918 aaKnown RBP5.97□□□□□ -1.45
MSH1YHR120W YMR147WP40218 223 aaKnown RBP5.97□□□□□ -1.45
MSH1YHR120W CDC16P09798 840 aa5.96□□□□□ -1.45
MSH1YHR120W PIB2P53191 635 aa5.96□□□□□ -1.45
MSH1YHR120W PPM2Q08282 695 aa5.96□□□□□ -1.45
MSH1YHR120W PCL8Q08966 492 aa5.96□□□□□ -1.45
MSH1YHR120W SRF1Q12516 437 aa5.96□□□□□ -1.45
MSH1YHR120W NPL4P33755 580 aa5.96□□□□□ -1.46
MSH1YHR120W MOT2P34909 587 aaKnown RBP5.96□□□□□ -1.46
MSH1YHR120W GEF1P37020 779 aa5.96□□□□□ -1.46
MSH1YHR120W TPS3P38426 1054 aaKnown RBP5.96□□□□□ -1.46
MSH1YHR120W GIN4Q12263 1142 aa5.96□□□□□ -1.46
MSH1YHR120W MSH4P40965 878 aaPredicted RBP5.96□□□□□ -1.46
MSH1YHR120W PEX29Q03370 554 aa5.96□□□□□ -1.46
MSH1YHR120W RMD1Q03441 430 aa5.96□□□□□ -1.46
MSH1YHR120W KAR5Q04746 504 aa5.96□□□□□ -1.46
MSH1YHR120W APE3P37302 537 aaKnown RBP5.95□□□□□ -1.46
MSH1YHR120W YBL028CP38202 106 aa5.95□□□□□ -1.46
MSH1YHR120W PBY1P38254 753 aa5.95□□□□□ -1.46
MSH1YHR120W RFC1P38630 861 aaKnown RBP5.95□□□□□ -1.46
MSH1YHR120W MRPS35P53292 345 aa5.95□□□□□ -1.46
MSH1YHR120W RBA50Q04418 439 aa5.95□□□□□ -1.46
MSH1YHR120W TUB2P02557 457 aaKnown RBP5.95□□□□□ -1.46
MSH1YHR120W CAB3P36076 571 aa5.95□□□□□ -1.46
MSH1YHR120W IRC8P47046 822 aa5.95□□□□□ -1.46
MSH1YHR120W KIN1P13185 1064 aa5.94□□□□□ -1.46
MSH1YHR120W MSP1P28737 362 aa5.94□□□□□ -1.46
MSH1YHR120W IOC3P43596 787 aa5.94□□□□□ -1.46
MSH1YHR120W BRE1Q07457 700 aaKnown RBP5.94□□□□□ -1.46
MSH1YHR120W KEL3Q08979 651 aaPredicted RBP5.94□□□□□ -1.46
MSH1YHR120W RSC30P38781 883 aa5.94□□□□□ -1.46
MSH1YHR120W NKP2Q06162 153 aa5.94□□□□□ -1.46
MSH1YHR120W RAD50P12753 1312 aa5.94□□□□□ -1.46
MSH1YHR120W OSH3P38713 996 aaKnown RBP5.93□□□□□ -1.46
MSH1YHR120W SLN1P39928 1220 aaPredicted RBP5.93□□□□□ -1.46
MSH1YHR120W BBC1P47068 1157 aa5.93□□□□□ -1.46
MSH1YHR120W YDL124WQ07551 312 aaKnown RBP5.93□□□□□ -1.46
MSH1YHR120W KTR1P27810 393 aaKnown RBP5.93□□□□□ -1.46
MSH1YHR120W PKH3Q03306 898 aaPredicted RBP5.93□□□□□ -1.46
MSH1YHR120W LAM4P38800 1345 aa5.93□□□□□ -1.46
MSH1YHR120W ACA1P39970 489 aa5.92□□□□□ -1.46
MSH1YHR120W ASH1P34233 588 aa5.92□□□□□ -1.46
MSH1YHR120W EBP2P36049 427 aaKnown RBP5.92□□□□□ -1.46
MSH1YHR120W ENP2P48234 707 aaKnown RBP5.92□□□□□ -1.46
MSH1YHR120W SNU71P53207 620 aaKnown RBP5.92□□□□□ -1.46
MSH1YHR120W JIP4Q03361 876 aa5.92□□□□□ -1.46
MSH1YHR120W YPL260WQ08977 551 aa5.92□□□□□ -1.46
MSH1YHR120W TAH18Q12181 623 aa5.92□□□□□ -1.46
MSH1YHR120W MPH3P0CE00 602 aa5.92□□□□□ -1.46
MSH1YHR120W SPT21P35209 758 aa5.92□□□□□ -1.46
MSH1YHR120W YHL050CP38721 697 aa5.92□□□□□ -1.46
MSH1YHR120W NCS6P53088 359 aa5.92□□□□□ -1.46
MSH1YHR120W COQ1P18900 473 aa5.91□□□□□ -1.46
MSH1YHR120W PRE8P23639 250 aa5.91□□□□□ -1.46
MSH1YHR120W OCT1P35999 772 aa5.91□□□□□ -1.46
MSH1YHR120W MAP2P38174 421 aaKnown RBP5.91□□□□□ -1.46
MSH1YHR120W CST26P38226 397 aa5.91□□□□□ -1.46
MSH1YHR120W OPI1P21957 404 aa5.9□□□□□ -1.46
MSH1YHR120W YDJ1P25491 409 aaKnown RBP5.9□□□□□ -1.46
MSH1YHR120W STM1P39015 273 aaKnown RBP5.9□□□□□ -1.46
MSH1YHR120W SRM1P21827 482 aa5.9□□□□□ -1.47
MSH1YHR120W RTS1P38903 757 aa5.9□□□□□ -1.47
MSH1YHR120W TIF4631P39935 952 aaKnown RBP5.9□□□□□ -1.47
MSH1YHR120W NET1P47035 1189 aa5.9□□□□□ -1.47
MSH1YHR120W HAP5Q02516 242 aa5.9□□□□□ -1.47
MSH1YHR120W DJP1P40564 432 aa5.89□□□□□ -1.47
MSH1YHR120W SPR3P41901 512 aa5.89□□□□□ -1.47
MSH1YHR120W TCB2P48231 1178 aa5.89□□□□□ -1.47
MSH1YHR120W LAP2Q10740 671 aa5.89□□□□□ -1.47
MSH1YHR120W RIM20Q12033 661 aa5.89□□□□□ -1.47
MSH1YHR120W CHO2P05374 869 aaKnown RBP5.89□□□□□ -1.47
MSH1YHR120W FBP1P09201 348 aa5.89□□□□□ -1.47
MSH1YHR120W VID27P40157 782 aa5.89□□□□□ -1.47
MSH1YHR120W GCR2Q01722 534 aa5.89□□□□□ -1.47
MSH1YHR120W SKG3Q06315 1026 aa5.89□□□□□ -1.47
MSH1YHR120W RAD61Q99359 647 aa5.89□□□□□ -1.47
MSH1YHR120W IXR1P33417 597 aa5.88□□□□□ -1.47
MSH1YHR120W MET1P36150 593 aa5.88□□□□□ -1.47
MSH1YHR120W ERG7P38604 731 aa5.88□□□□□ -1.47
MSH1YHR120W LYS14P40971 790 aa5.88□□□□□ -1.47
MSH1YHR120W YLR225CQ05948 407 aaKnown RBP5.88□□□□□ -1.47
MSH1YHR120W SGD1Q06132 899 aa5.88□□□□□ -1.47
MSH1YHR120W KRS1P15180 591 aaKnown RBP5.88□□□□□ -1.47
MSH1YHR120W RRP8P38961 392 aaKnown RBP5.88□□□□□ -1.47
MSH1YHR120W MRD1Q06106 887 aaKnown RBP5.88□□□□□ -1.47
MSH1YHR120W SUB2Q07478 446 aaKnown RBP5.88□□□□□ -1.47
MSH1YHR120W VAS1P07806 1104 aaKnown RBP5.87□□□□□ -1.47
MSH1YHR120W SRS2P12954 1174 aa5.87□□□□□ -1.47
MSH1YHR120W SPB4P25808 606 aaPredicted RBP5.87□□□□□ -1.47
MSH1YHR120W DLD1P32891 587 aa5.87□□□□□ -1.47
MSH1YHR120W MCD4P36051 919 aa5.87□□□□□ -1.47
MSH1YHR120W AAP1P37898 856 aaKnown RBP5.87□□□□□ -1.47
MSH1YHR120W ARL1P38116 183 aaKnown RBP5.87□□□□□ -1.47
MSH1YHR120W VAB2P40003 282 aa5.87□□□□□ -1.47
MSH1YHR120W YJL007CP47080 104 aa5.87□□□□□ -1.47
MSH1YHR120W RPS15Q01855 142 aaKnown RBP5.87□□□□□ -1.47
Retrieved 100 of 5,963 RNA–protein pairs in 9.3 ms