RNA–Protein interactions for RNA: YHR026W

VMA16, Transcript of Subunit c'' of the vacuolar ATPase, yeastyeast

Gene VMA16, Length 642 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMA16YHR026W SEC3P33332 1336 aaKnown RBP7.27□□□□□ -1.24
VMA16YHR026W YBP2P53169 641 aa7.27□□□□□ -1.25
VMA16YHR026W FRA1Q07825 749 aa7.27□□□□□ -1.25
VMA16YHR026W SMY1P32364 656 aaKnown RBP7.26□□□□□ -1.25
VMA16YHR026W YPP1P46951 817 aa7.26□□□□□ -1.25
VMA16YHR026W MRX10Q05648 414 aa7.26□□□□□ -1.25
VMA16YHR026W MET32Q12041 191 aa7.26□□□□□ -1.25
VMA16YHR026W PDI1P17967 522 aaKnown RBP7.25□□□□□ -1.25
VMA16YHR026W MAC1P35192 417 aa7.25□□□□□ -1.25
VMA16YHR026W RDS2P19541 446 aaKnown RBP7.24□□□□□ -1.25
VMA16YHR026W ICL1P28240 557 aaPredicted RBP7.24□□□□□ -1.25
VMA16YHR026W SHC1P39000 512 aa7.24□□□□□ -1.25
VMA16YHR026W SCT1P32784 759 aa7.23□□□□□ -1.25
VMA16YHR026W KTR7P40504 517 aa7.22□□□□□ -1.25
VMA16YHR026W CDC4P07834 779 aa7.21□□□□□ -1.26
VMA16YHR026W SOH1P38633 127 aa7.21□□□□□ -1.26
VMA16YHR026W ERO1Q03103 563 aa7.21□□□□□ -1.26
VMA16YHR026W LPD1P09624 499 aaKnown RBP7.2□□□□□ -1.26
VMA16YHR026W YKU70P32807 602 aa7.2□□□□□ -1.26
VMA16YHR026W TTI1P36097 1038 aa7.2□□□□□ -1.26
VMA16YHR026W YIL089WP40500 205 aa7.2□□□□□ -1.26
VMA16YHR026W EMW1P42842 904 aaKnown RBP7.2□□□□□ -1.26
VMA16YHR026W BUD27P43573 796 aaKnown RBP RIP-Chip data7.2□□□□□ -1.26not detected
VMA16YHR026W ORC1P54784 914 aaPredicted RBP7.2□□□□□ -1.26
VMA16YHR026W SRC1Q03707 834 aa7.2□□□□□ -1.26
VMA16YHR026W GRX4P32642 244 aa7.19□□□□□ -1.26
VMA16YHR026W ASH1P34233 588 aa7.19□□□□□ -1.26
VMA16YHR026W ISR1Q06098 443 aaKnown RBP7.19□□□□□ -1.26
VMA16YHR026W IRC3Q06683 689 aa7.19□□□□□ -1.26
VMA16YHR026W SRF1Q12516 437 aa7.19□□□□□ -1.26
VMA16YHR026W MRT4P33201 236 aaKnown RBP7.18□□□□□ -1.26
VMA16YHR026W APL6P46682 809 aa7.18□□□□□ -1.26
VMA16YHR026W MKS1P34072 584 aa7.17□□□□□ -1.26
VMA16YHR026W HAL5P38970 855 aaKnown RBP7.17□□□□□ -1.26
VMA16YHR026W HST3P53687 447 aa7.17□□□□□ -1.26
VMA16YHR026W TAP42Q04372 366 aa7.17□□□□□ -1.26
VMA16YHR026W TIF6Q12522 245 aaKnown RBP7.17□□□□□ -1.26
VMA16YHR026W NUP145P49687 1317 aa7.17□□□□□ -1.26
VMA16YHR026W AUS1Q08409 1394 aa7.17□□□□□ -1.26
VMA16YHR026W TRK1P12685 1235 aa7.16□□□□□ -1.26
VMA16YHR026W SER1P33330 395 aaKnown RBP7.16□□□□□ -1.26
VMA16YHR026W RAT1Q02792 1006 aaKnown RBP7.16□□□□□ -1.26
VMA16YHR026W BDF2Q07442 638 aa7.16□□□□□ -1.26
VMA16YHR026W GRX6Q12438 231 aa7.16□□□□□ -1.26
VMA16YHR026W MSM1P22438 575 aa7.15□□□□□ -1.26
VMA16YHR026W PEP12P32854 288 aa7.15□□□□□ -1.26
VMA16YHR026W ATG3P40344 310 aa7.15□□□□□ -1.26
VMA16YHR026W RMT2Q03305 412 aa7.15□□□□□ -1.26
VMA16YHR026W DFG5Q05031 458 aa7.15□□□□□ -1.26
VMA16YHR026W HIM1Q06674 414 aa7.15□□□□□ -1.26
VMA16YHR026W CAF20P12962 161 aaKnown RBP7.14□□□□□ -1.27
VMA16YHR026W UGA3P26370 528 aa7.14□□□□□ -1.27
VMA16YHR026W HSP104P31539 908 aaKnown RBP7.14□□□□□ -1.27
VMA16YHR026W FET4P40988 552 aa7.14□□□□□ -1.27
VMA16YHR026W MDG1P53885 366 aa7.14□□□□□ -1.27
VMA16YHR026W AFT1P22149 690 aa7.13□□□□□ -1.27
VMA16YHR026W PEA2P40091 420 aa7.13□□□□□ -1.27
VMA16YHR026W YFR016CP43597 1233 aaKnown RBP7.13□□□□□ -1.27
VMA16YHR026W CTF4Q01454 927 aa7.13□□□□□ -1.27
VMA16YHR026W DIB1Q06819 143 aaPredicted RBP7.13□□□□□ -1.27
VMA16YHR026W MIP1P15801 1254 aa7.12□□□□□ -1.27
VMA16YHR026W FBP26P32604 452 aa7.12□□□□□ -1.27
VMA16YHR026W TGL4P36165 910 aa7.12□□□□□ -1.27
VMA16YHR026W NCS6P53088 359 aa7.12□□□□□ -1.27
VMA16YHR026W TIM50Q02776 476 aa7.12□□□□□ -1.27
VMA16YHR026W PHM7Q12252 991 aa7.12□□□□□ -1.27
VMA16YHR026W DSD1P53095 428 aa7.11□□□□□ -1.27
VMA16YHR026W UTP13Q05946 817 aaKnown RBP7.11□□□□□ -1.27
VMA16YHR026W CBC2Q08920 208 aaKnown RBP RIP-Chip data7.11□□□□□ -1.27not detected
VMA16YHR026W FAS2P19097 1887 aaKnown RBP7.11□□□□□ -1.27
VMA16YHR026W SIS2P36024 562 aa7.1□□□□□ -1.27
VMA16YHR026W YGL082WP53155 381 aa7.1□□□□□ -1.27
VMA16YHR026W ECM23Q02710 187 aa7.1□□□□□ -1.27
VMA16YHR026W ISU1Q03020 165 aa7.1□□□□□ -1.27
VMA16YHR026W CWC15Q03772 175 aaKnown RBP7.1□□□□□ -1.27
VMA16YHR026W HDA3Q06623 655 aa7.1□□□□□ -1.27
VMA16YHR026W SUB2Q07478 446 aaKnown RBP7.1□□□□□ -1.27
VMA16YHR026W YJR115WP47152 169 aa7.09□□□□□ -1.27
VMA16YHR026W YML083CQ04526 418 aa7.09□□□□□ -1.27
VMA16YHR026W BDS1Q08347 646 aa7.09□□□□□ -1.27
VMA16YHR026W PMD1P32634 1753 aa7.08□□□□□ -1.28
VMA16YHR026W HVG1P0CE11 249 aa7.08□□□□□ -1.28
VMA16YHR026W DAT1P13483 248 aaKnown RBP7.08□□□□□ -1.28
VMA16YHR026W PUP1P25043 261 aa7.08□□□□□ -1.28
VMA16YHR026W PAM1P37304 830 aaKnown RBP7.08□□□□□ -1.28
VMA16YHR026W BSD2P38356 321 aa7.08□□□□□ -1.28
VMA16YHR026W NOB1Q08444 459 aaKnown RBP7.08□□□□□ -1.28
VMA16YHR026W FIG2P25653 1609 aa7.08□□□□□ -1.28
VMA16YHR026W MLP1Q02455 1875 aaKnown RBP7.07□□□□□ -1.28
VMA16YHR026W UTR2P32623 467 aa7.07□□□□□ -1.28
VMA16YHR026W YGR117CP53270 476 aa7.07□□□□□ -1.28
VMA16YHR026W UTP10P42945 1769 aaKnown RBP7.07□□□□□ -1.28
VMA16YHR026W STE6P12866 1290 aa7.06□□□□□ -1.28
VMA16YHR026W TRM44Q02648 567 aaKnown RBP7.06□□□□□ -1.28
VMA16YHR026W GAL2P13181 574 aa7.05□□□□□ -1.28
VMA16YHR026W FRD1P32614 470 aaKnown RBP7.05□□□□□ -1.28
VMA16YHR026W BRE2P43132 505 aa7.05□□□□□ -1.28
VMA16YHR026W PTK2P47116 818 aaKnown RBP7.05□□□□□ -1.28
VMA16YHR026W UBP16Q02863 499 aa7.05□□□□□ -1.28
VMA16YHR026W PDS5Q04264 1277 aa7.05□□□□□ -1.28
Retrieved 100 of 5,963 RNA–protein pairs in 27.7 ms