RNA–Protein interactions for RNA: YGR141W

VPS62, Transcript of Vacuolar protein sorting (VPS) protein, yeast

Gene VPS62, Length 1,404 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VPS62	YGR141W	PPM2	Q08282	695 aa		10.31	□□□□□ -0.76
VPS62	YGR141W	RPL22A	P05749	121 aa	Known RBP	10.3	□□□□□ -0.76
VPS62	YGR141W	SSA2	P10592	639 aa	Known RBP	10.3	□□□□□ -0.76
VPS62	YGR141W	DIT2	P21595	489 aa		10.3	□□□□□ -0.76
VPS62	YGR141W	YKT6	P36015	200 aa	Known RBP	10.3	□□□□□ -0.76
VPS62	YGR141W	RRM3	P38766	723 aa		10.3	□□□□□ -0.76
VPS62	YGR141W	TFG2	P41896	400 aa	Predicted RBP	10.3	□□□□□ -0.76
VPS62	YGR141W	TCB2	P48231	1178 aa		10.3	□□□□□ -0.76
VPS62	YGR141W	YPT11	P48559	417 aa		10.3	□□□□□ -0.76
VPS62	YGR141W	UBX2	Q04228	584 aa		10.3	□□□□□ -0.76
VPS62	YGR141W	INM2	Q05533	292 aa		10.3	□□□□□ -0.76
VPS62	YGR141W	TRS33	Q99394	268 aa		10.3	□□□□□ -0.76
VPS62	YGR141W	ATE1	P16639	503 aa		10.29	□□□□□ -0.76
VPS62	YGR141W	ASF1	P32447	279 aa		10.29	□□□□□ -0.76
VPS62	YGR141W	BMH2	P34730	273 aa	Known RBP	10.29	□□□□□ -0.76
VPS62	YGR141W	BOI1	P38041	980 aa	Known RBP	10.29	□□□□□ -0.76
VPS62	YGR141W	GRX7	P38068	203 aa		10.29	□□□□□ -0.76
VPS62	YGR141W	HPC2	Q01448	625 aa		10.29	□□□□□ -0.76
VPS62	YGR141W	SGD1	Q06132	899 aa		10.29	□□□□□ -0.76
VPS62	YGR141W	IRC3	Q06683	689 aa		10.29	□□□□□ -0.76
VPS62	YGR141W	COQ1	P18900	473 aa		10.28	□□□□□ -0.76
VPS62	YGR141W	SIT4	P20604	311 aa		10.28	□□□□□ -0.76
VPS62	YGR141W	GTT3	P39996	337 aa		10.28	□□□□□ -0.76
VPS62	YGR141W	SAS4	Q04003	481 aa		10.28	□□□□□ -0.76
VPS62	YGR141W	HSP82	P02829	709 aa	Known RBP	10.27	□□□□□ -0.77
VPS62	YGR141W	GPA1	P08539	472 aa		10.27	□□□□□ -0.77
VPS62	YGR141W	CYC8	P14922	966 aa		10.27	□□□□□ -0.77
VPS62	YGR141W	FRD1	P32614	470 aa	Known RBP	10.27	□□□□□ -0.77
VPS62	YGR141W	TOS1	P38288	455 aa		10.27	□□□□□ -0.77
VPS62	YGR141W	YER130C	P39959	443 aa		10.27	□□□□□ -0.77
VPS62	YGR141W	YIR042C	P40586	236 aa		10.27	□□□□□ -0.77
VPS62	YGR141W	ALG2	P43636	503 aa		10.27	□□□□□ -0.77
VPS62	YGR141W	ALD2	P47771	506 aa		10.27	□□□□□ -0.77
VPS62	YGR141W	LYS4	P49367	693 aa	Predicted RBP	10.27	□□□□□ -0.77
VPS62	YGR141W	UFD2	P54860	961 aa		10.27	□□□□□ -0.77
VPS62	YGR141W	RPS15	Q01855	142 aa	Known RBP	10.27	□□□□□ -0.77
VPS62	YGR141W	TOP1	P04786	769 aa		10.26	□□□□□ -0.77
VPS62	YGR141W	BUD31	P25337	157 aa	Predicted RBP	10.26	□□□□□ -0.77
VPS62	YGR141W	KRE2	P27809	442 aa		10.26	□□□□□ -0.77
VPS62	YGR141W	EPL1	P43572	832 aa		10.26	□□□□□ -0.77
VPS62	YGR141W	ISW2	Q08773	1120 aa		10.26	□□□□□ -0.77
VPS62	YGR141W	MAL31	P38156	614 aa		10.25	□□□□□ -0.77
VPS62	YGR141W	SPL2	P38839	148 aa		10.25	□□□□□ -0.77
VPS62	YGR141W	RTS1	P38903	757 aa		10.25	□□□□□ -0.77
VPS62	YGR141W	NOP58	Q12499	511 aa	Known RBP	10.25	□□□□□ -0.77
VPS62	YGR141W	HXK1	P04806	485 aa	Known RBP	10.24	□□□□□ -0.77
VPS62	YGR141W	PFF1	P38244	976 aa		10.24	□□□□□ -0.77
VPS62	YGR141W	RPN10	P38886	268 aa	Known RBP	10.24	□□□□□ -0.77
VPS62	YGR141W	YFH7	P43591	353 aa		10.24	□□□□□ -0.77
VPS62	YGR141W	STU2	P46675	888 aa		10.24	□□□□□ -0.77
VPS62	YGR141W	MRD1	Q06106	887 aa	Known RBP	10.24	□□□□□ -0.77
VPS62	YGR141W	SES1	P07284	462 aa	Known RBP	10.24	□□□□□ -0.77
VPS62	YGR141W	RGP1	P16664	663 aa		10.24	□□□□□ -0.77
VPS62	YGR141W	PTK1	P36002	662 aa	Predicted RBP	10.24	□□□□□ -0.77
VPS62	YGR141W	AKR1	P39010	764 aa		10.24	□□□□□ -0.77
VPS62	YGR141W	RPT4	P53549	437 aa	Known RBP	10.24	□□□□□ -0.77
VPS62	YGR141W	GDE1	Q02979	1223 aa		10.24	□□□□□ -0.77
VPS62	YGR141W	IRC4	Q03036	179 aa		10.24	□□□□□ -0.77
VPS62	YGR141W	RIX7	Q07844	837 aa	Known RBP	10.24	□□□□□ -0.77
VPS62	YGR141W	HCA4	P20448	770 aa	Known RBP	10.23	□□□□□ -0.77
VPS62	YGR141W	LCB1	P25045	558 aa	Known RBP	10.23	□□□□□ -0.77
VPS62	YGR141W	SWI4	P25302	1093 aa	Known RBP	10.23	□□□□□ -0.77
VPS62	YGR141W	GSY2	P27472	705 aa		10.23	□□□□□ -0.77
VPS62	YGR141W	JJJ2	P46997	583 aa		10.23	□□□□□ -0.77
VPS62	YGR141W	TIM50	Q02776	476 aa		10.23	□□□□□ -0.77
VPS62	YGR141W	TFC6	Q06339	672 aa		10.23	□□□□□ -0.77
VPS62	YGR141W	CEX1	Q12453	761 aa		10.23	□□□□□ -0.77
VPS62	YGR141W	GLN1	P32288	370 aa	Known RBP	10.22	□□□□□ -0.77
VPS62	YGR141W	SPC110	P32380	944 aa		10.22	□□□□□ -0.77
VPS62	YGR141W	ANP1	P32629	500 aa		10.22	□□□□□ -0.77
VPS62	YGR141W	CTH1	P47976	325 aa		10.22	□□□□□ -0.77
VPS62	YGR141W	PIP2	P52960	996 aa		10.22	□□□□□ -0.77
VPS62	YGR141W	CHO2	P05374	869 aa	Known RBP	10.21	□□□□□ -0.78
VPS62	YGR141W	MDL2	P33311	773 aa		10.21	□□□□□ -0.78
VPS62	YGR141W	MYO3	P36006	1272 aa		10.21	□□□□□ -0.78
VPS62	YGR141W	TPM2	P40414	161 aa		10.21	□□□□□ -0.78
VPS62	YGR141W	CUE3	P53137	624 aa	Known RBP	10.21	□□□□□ -0.78
VPS62	YGR141W	SSL2	Q00578	843 aa		10.21	□□□□□ -0.78
VPS62	YGR141W	DCS2	Q12123	353 aa		10.21	□□□□□ -0.78
VPS62	YGR141W	NBL1	Q3E7Y6	73 aa		10.21	□□□□□ -0.78
VPS62	YGR141W	MAK31	P23059	88 aa		10.2	□□□□□ -0.78
VPS62	YGR141W	ERO1	Q03103	563 aa		10.2	□□□□□ -0.78
VPS62	YGR141W	GET3	Q12154	354 aa	Known RBP	10.2	□□□□□ -0.78
VPS62	YGR141W	MCM3	P24279	971 aa	Known RBP	10.19	□□□□□ -0.78
VPS62	YGR141W	NOC2	P39744	710 aa	Known RBP	10.19	□□□□□ -0.78
VPS62	YGR141W	MSH4	P40965	878 aa	Predicted RBP	10.19	□□□□□ -0.78
VPS62	YGR141W	SNU71	P53207	620 aa	Known RBP	10.19	□□□□□ -0.78
VPS62	YGR141W	VMS1	Q04311	632 aa	Known RBP	10.19	□□□□□ -0.78
VPS62	YGR141W	FIG2	P25653	1609 aa		10.19	□□□□□ -0.78
VPS62	YGR141W	RNR3	P21672	869 aa	Known RBP	10.18	□□□□□ -0.78
VPS62	YGR141W	RPT3	P33298	428 aa	Known RBP	10.18	□□□□□ -0.78
VPS62	YGR141W	UGA2	P38067	497 aa		10.18	□□□□□ -0.78
VPS62	YGR141W	RXT2	P38255	430 aa		10.18	□□□□□ -0.78
VPS62	YGR141W	RTC4	P53850	401 aa		10.18	□□□□□ -0.78
VPS62	YGR141W	YPL260W	Q08977	551 aa		10.18	□□□□□ -0.78
VPS62	YGR141W	WRS1	Q12109	432 aa	Known RBP	10.18	□□□□□ -0.78
VPS62	YGR141W	CDC6	P09119	513 aa		10.17	□□□□□ -0.78
VPS62	YGR141W	BMH1	P29311	267 aa	Known RBP	10.17	□□□□□ -0.78
VPS62	YGR141W	WAR1	Q03631	944 aa		10.17	□□□□□ -0.78
VPS62	YGR141W	HCR1	Q05775	265 aa	Known RBP	10.17	□□□□□ -0.78

Retrieved 100 of 5,963 RNA–protein pairs in 71.2 ms