RNA–Protein interactions for RNA: YGR100W

MDR1, Transcript of Cytoplasmic GTPase-activating protein, yeastyeast

Gene MDR1, Length 2,853 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MDR1YGR100W TY4A-HQ6Q5P6 413 aa5.06□□□□□ -1.6
MDR1YGR100W KDX1P36005 433 aa5.05□□□□□ -1.6
MDR1YGR100W OSH3P38713 996 aaKnown RBP5.05□□□□□ -1.6
MDR1YGR100W YGL242CP53066 181 aa5.05□□□□□ -1.6
MDR1YGR100W YNL247WP53852 767 aaKnown RBP5.05□□□□□ -1.6
MDR1YGR100W CUS1Q02554 436 aaPredicted RBP5.05□□□□□ -1.6
MDR1YGR100W YDL073WQ07454 984 aa5.05□□□□□ -1.6
MDR1YGR100W RTT109Q07794 436 aa5.05□□□□□ -1.6
MDR1YGR100W APL4Q12028 832 aa5.05□□□□□ -1.6
MDR1YGR100W LYS2P07702 1392 aa5.05□□□□□ -1.6
MDR1YGR100W MDS3P53094 1487 aa5.05□□□□□ -1.6
MDR1YGR100W HXT5P38695 592 aa5.05□□□□□ -1.6
MDR1YGR100W MET10P39692 1035 aa5.05□□□□□ -1.6
MDR1YGR100W ORM1P53224 222 aa5.05□□□□□ -1.6
MDR1YGR100W RIA1P53893 1110 aa5.05□□□□□ -1.6
MDR1YGR100W YKU80Q04437 629 aa5.05□□□□□ -1.6
MDR1YGR100W DPL1Q05567 589 aa5.05□□□□□ -1.6
MDR1YGR100W HEL2Q05580 639 aaKnown RBP5.05□□□□□ -1.6
MDR1YGR100W AVO1Q08236 1176 aa5.05□□□□□ -1.6
MDR1YGR100W YOR296WQ08748 1289 aa5.05□□□□□ -1.6
MDR1YGR100W YIG1Q08956 461 aa5.05□□□□□ -1.6
MDR1YGR100W KRE5P22023 1365 aa5.05□□□□□ -1.6
MDR1YGR100W ARG1P22768 420 aa5.04□□□□□ -1.6
MDR1YGR100W PRD1P25375 712 aa5.04□□□□□ -1.6
MDR1YGR100W SSZ1P38788 538 aaKnown RBP5.04□□□□□ -1.6
MDR1YGR100W MAD1P40957 749 aa5.04□□□□□ -1.6
MDR1YGR100W ENT3P47160 408 aa5.04□□□□□ -1.6
MDR1YGR100W GYP7P48365 746 aa5.04□□□□□ -1.6
MDR1YGR100W INP2Q03824 705 aa5.04□□□□□ -1.6
MDR1YGR100W YPR172WQ06608 200 aa5.04□□□□□ -1.6
MDR1YGR100W GNT1Q12096 491 aa5.04□□□□□ -1.6
MDR1YGR100W ATG9Q12142 997 aa5.04□□□□□ -1.6
MDR1YGR100W PMR1P13586 950 aa5.04□□□□□ -1.6
MDR1YGR100W CMP2P14747 604 aa5.04□□□□□ -1.6
MDR1YGR100W THR4P16120 514 aaKnown RBP5.04□□□□□ -1.6
MDR1YGR100W MET4P32389 672 aa5.04□□□□□ -1.6
MDR1YGR100W PDB1P32473 366 aaKnown RBP5.04□□□□□ -1.6
MDR1YGR100W OCA1P50946 238 aaPredicted RBP5.04□□□□□ -1.6
MDR1YGR100W ESF2P53743 316 aaKnown RBP5.04□□□□□ -1.6
MDR1YGR100W MAK21Q12176 1025 aaKnown RBP5.04□□□□□ -1.6
MDR1YGR100W PDR1P12383 1068 aa5.03□□□□□ -1.6
MDR1YGR100W CLB4P24871 460 aa5.03□□□□□ -1.6
MDR1YGR100W CCT4P39078 528 aaKnown RBP5.03□□□□□ -1.6
MDR1YGR100W VTC3Q02725 835 aa5.03□□□□□ -1.6
MDR1YGR100W CHS5Q12114 671 aaKnown RBP5.03□□□□□ -1.6
MDR1YGR100W TY2B-LR1P0C2J3 1770 aa5.03□□□□□ -1.6
MDR1YGR100W TY2B-FP0CX63 1770 aa5.03□□□□□ -1.6
MDR1YGR100W TY2B-GR2P0CX64 1770 aa5.03□□□□□ -1.6
MDR1YGR100W TY2B-CP25384 1770 aa5.03□□□□□ -1.6
MDR1YGR100W TY2B-DR2Q03494 1770 aa5.03□□□□□ -1.6
MDR1YGR100W TY1B-DR1Q03855 1755 aa5.03□□□□□ -1.6
MDR1YGR100W TY2B-DR3Q07791 1770 aaKnown RBP5.03□□□□□ -1.6
MDR1YGR100W TY2B-OR1Q12113 1770 aa5.03□□□□□ -1.6
MDR1YGR100W TY2B-DR1Q12472 1770 aa5.03□□□□□ -1.6
MDR1YGR100W TY2B-OR2Q12501 1770 aa5.03□□□□□ -1.6
MDR1YGR100W LTE1P07866 1435 aa5.03□□□□□ -1.6
MDR1YGR100W DOP1Q03921 1698 aa5.03□□□□□ -1.6
MDR1YGR100W GCD2P12754 651 aaPredicted RBP5.03□□□□□ -1.6
MDR1YGR100W UBC1P21734 215 aaKnown RBP5.03□□□□□ -1.6
MDR1YGR100W CDC15P27636 974 aa5.03□□□□□ -1.6
MDR1YGR100W ATG14P38270 344 aa5.03□□□□□ -1.6
MDR1YGR100W MAM1P40065 302 aa5.03□□□□□ -1.6
MDR1YGR100W APT1P49435 187 aaKnown RBP5.03□□□□□ -1.6
MDR1YGR100W RSA3Q05942 220 aaKnown RBP5.03□□□□□ -1.6
MDR1YGR100W SMD2Q06217 110 aaKnown RBP5.03□□□□□ -1.6
MDR1YGR100W PDR11P40550 1411 aa5.03□□□□□ -1.6
MDR1YGR100W BUD14P27637 709 aa5.02□□□□□ -1.61
MDR1YGR100W RPC19P28000 142 aaKnown RBP5.02□□□□□ -1.61
MDR1YGR100W MUM2P38236 366 aa5.02□□□□□ -1.61
MDR1YGR100W NUP60P39705 539 aa5.02□□□□□ -1.61
MDR1YGR100W RLP7P40693 322 aaKnown RBP5.02□□□□□ -1.61
MDR1YGR100W RCM1P53972 490 aa5.02□□□□□ -1.61
MDR1YGR100W WAR1Q03631 944 aa5.02□□□□□ -1.61
MDR1YGR100W GAL11P19659 1081 aa5.02□□□□□ -1.61
MDR1YGR100W NPL6P32832 435 aa5.02□□□□□ -1.61
MDR1YGR100W ATO2P32907 282 aa5.02□□□□□ -1.61
MDR1YGR100W LHS1P36016 881 aa5.02□□□□□ -1.61
MDR1YGR100W SSP1P38871 571 aa5.02□□□□□ -1.61
MDR1YGR100W VPS53P47061 822 aa5.02□□□□□ -1.61
MDR1YGR100W ILM1P47155 203 aa5.02□□□□□ -1.61
MDR1YGR100W FMS1P50264 508 aa5.02□□□□□ -1.61
MDR1YGR100W ATG13Q06628 738 aa5.02□□□□□ -1.61
MDR1YGR100W SWI1P09547 1314 aa5.02□□□□□ -1.61
MDR1YGR100W PDR12Q02785 1511 aa5.02□□□□□ -1.61
MDR1YGR100W RAD1P06777 1100 aa5.02□□□□□ -1.61
MDR1YGR100W CPS1P27614 576 aa5.02□□□□□ -1.61
MDR1YGR100W MUD2P36084 527 aaKnown RBP5.02□□□□□ -1.61
MDR1YGR100W ESL2P36168 1195 aa5.02□□□□□ -1.61
MDR1YGR100W MPT5P39016 859 aaKnown RBP RIP-Chip data5.02□□□□□ -1.61not detected
MDR1YGR100W HOS2P53096 452 aaPredicted RBP5.02□□□□□ -1.61
MDR1YGR100W SPO1P53541 631 aa5.02□□□□□ -1.61
MDR1YGR100W MFM1Q02783 413 aa5.02□□□□□ -1.61
MDR1YGR100W FMP30Q02883 468 aa5.02□□□□□ -1.61
MDR1YGR100W FAR8Q05040 523 aa5.02□□□□□ -1.61
MDR1YGR100W ATG23Q06671 453 aa5.02□□□□□ -1.61
MDR1YGR100W NOP12Q08208 459 aaKnown RBP5.02□□□□□ -1.61
MDR1YGR100W TY2B-BQ12491 1770 aa5.01□□□□□ -1.61
MDR1YGR100W RPO26P20435 155 aa5.01□□□□□ -1.61
MDR1YGR100W STE11P23561 717 aa5.01□□□□□ -1.61
MDR1YGR100W NMD3P38861 518 aaKnown RBP5.01□□□□□ -1.61
Retrieved 100 of 5,963 RNA–protein pairs in 15.6 ms