RNA–Protein interactions for RNA: YFL005W

SEC4, Transcript of Rab family GTPase, yeastyeast

Gene SEC4, Length 648 nt, Biotype protein coding, Subcellular localisation Cellular bud, Endoplasmic reticulum, Nucleus, Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC4YFL005W VMA3P25515 160 aa5.29□□□□□ -1.56
SEC4YFL005W HEM3P28789 327 aa5.29□□□□□ -1.56
SEC4YFL005W YER156CP40093 338 aaKnown RBP5.29□□□□□ -1.56
SEC4YFL005W QDR2P40474 542 aa5.29□□□□□ -1.56
SEC4YFL005W TY1A-NL1Q12391 440 aaKnown RBP5.29□□□□□ -1.56
SEC4YFL005W LSO1Q3E827 93 aa5.29□□□□□ -1.56
SEC4YFL005W RPB10P22139 70 aa5.28□□□□□ -1.56
SEC4YFL005W GIP2P40036 548 aa5.28□□□□□ -1.56
SEC4YFL005W MDJ2P42834 146 aa5.28□□□□□ -1.56
SEC4YFL005W YGR130CP53278 816 aa5.28□□□□□ -1.56
SEC4YFL005W DSE4P53753 1117 aa5.28□□□□□ -1.56
SEC4YFL005W SEC20P28791 383 aa5.27□□□□□ -1.57
SEC4YFL005W GRS1P38088 690 aaKnown RBP5.27□□□□□ -1.57
SEC4YFL005W ACF4P47129 309 aa5.27□□□□□ -1.57
SEC4YFL005W ITC1P53125 1264 aa5.27□□□□□ -1.57
SEC4YFL005W GLO3P38682 493 aaKnown RBP5.26□□□□□ -1.57
SEC4YFL005W QDR1P40475 563 aa5.26□□□□□ -1.57
SEC4YFL005W TED1P40533 473 aa5.26□□□□□ -1.57
SEC4YFL005W MSC6Q08818 692 aaKnown RBP5.26□□□□□ -1.57
SEC4YFL005W SPO74P45819 413 aa5.25□□□□□ -1.57
SEC4YFL005W PUF3Q07807 879 aaKnown RBP RIP-Chip data5.25□□□□□ -1.57not detected
SEC4YFL005W APC11Q12157 165 aa5.25□□□□□ -1.57
SEC4YFL005W NAM7P30771 971 aaKnown RBP5.24□□□□□ -1.57
SEC4YFL005W YHL050CP38721 697 aa5.24□□□□□ -1.57
SEC4YFL005W YHR219WP38900 624 aa5.24□□□□□ -1.57
SEC4YFL005W UBP5P39944 805 aa5.24□□□□□ -1.57
SEC4YFL005W SUT1P53032 299 aaKnown RBP5.24□□□□□ -1.57
SEC4YFL005W SOK2P53438 785 aaPredicted RBP5.24□□□□□ -1.57
SEC4YFL005W MAG2Q06436 670 aaKnown RBP5.24□□□□□ -1.57
SEC4YFL005W CYC7P00045 113 aa5.23□□□□□ -1.57
SEC4YFL005W BSD2P38356 321 aa5.23□□□□□ -1.57
SEC4YFL005W IPL1P38991 367 aa5.23□□□□□ -1.57
SEC4YFL005W AKR1P39010 764 aa5.23□□□□□ -1.57
SEC4YFL005W RSC2Q06488 889 aa5.23□□□□□ -1.57
SEC4YFL005W YOR296WQ08748 1289 aa5.23□□□□□ -1.57
SEC4YFL005W REC8Q12188 680 aa5.23□□□□□ -1.57
SEC4YFL005W PPX1P38698 397 aa5.22□□□□□ -1.57
SEC4YFL005W MSN1P22148 382 aa5.21□□□□□ -1.58
SEC4YFL005W LDH1P38139 375 aa5.21□□□□□ -1.58
SEC4YFL005W DYS1P38791 387 aa5.21□□□□□ -1.58
SEC4YFL005W MSB1P21339 1137 aaKnown RBP5.2□□□□□ -1.58
SEC4YFL005W ASF1P32447 279 aa5.2□□□□□ -1.58
SEC4YFL005W GIP1P38229 639 aa5.2□□□□□ -1.58
SEC4YFL005W HXT8P40886 569 aa5.2□□□□□ -1.58
SEC4YFL005W NUT2Q06213 157 aa5.2□□□□□ -1.58
SEC4YFL005W FRT1Q99332 602 aa5.2□□□□□ -1.58
SEC4YFL005W RGD2P43556 714 aa5.19□□□□□ -1.58
SEC4YFL005W TRS120Q04183 1289 aa5.19□□□□□ -1.58
SEC4YFL005W UFD2P54860 961 aa5.18□□□□□ -1.58
SEC4YFL005W LEM3P42838 414 aa5.17□□□□□ -1.58
SEC4YFL005W THI12P42883 340 aa5.17□□□□□ -1.58
SEC4YFL005W THI5P43534 340 aa5.17□□□□□ -1.58
SEC4YFL005W THI11P47183 340 aa5.17□□□□□ -1.58
SEC4YFL005W SNU71P53207 620 aaKnown RBP5.17□□□□□ -1.58
SEC4YFL005W THI13Q07748 340 aa5.17□□□□□ -1.58
SEC4YFL005W MNL2Q12205 849 aa5.17□□□□□ -1.58
SEC4YFL005W WHI5Q12416 295 aa5.17□□□□□ -1.58
SEC4YFL005W SMC1P32908 1225 aa5.16□□□□□ -1.58
SEC4YFL005W ISW1P38144 1129 aa5.16□□□□□ -1.58
SEC4YFL005W YJL181WP46987 611 aa5.16□□□□□ -1.58
SEC4YFL005W GUP1P53154 560 aa5.16□□□□□ -1.58
SEC4YFL005W GPI13Q07830 1017 aa5.16□□□□□ -1.58
SEC4YFL005W TIF6Q12522 245 aaKnown RBP5.16□□□□□ -1.58
SEC4YFL005W RNQ1P25367 405 aa5.15□□□□□ -1.59
SEC4YFL005W PAN5P38787 379 aa5.15□□□□□ -1.59
SEC4YFL005W YIL165CP40446 119 aa5.15□□□□□ -1.59
SEC4YFL005W POL32P47110 350 aa5.15□□□□□ -1.59
SEC4YFL005W PPT1P53043 513 aa5.15□□□□□ -1.59
SEC4YFL005W EMG1Q06287 252 aaKnown RBP5.15□□□□□ -1.59
SEC4YFL005W RAD55P38953 406 aa5.14□□□□□ -1.59
SEC4YFL005W INP51P40559 946 aaKnown RBP5.14□□□□□ -1.59
SEC4YFL005W MET4P32389 672 aa5.13□□□□□ -1.59
SEC4YFL005W MAE1P36013 669 aaKnown RBP5.13□□□□□ -1.59
SEC4YFL005W FIR1P40020 876 aa5.13□□□□□ -1.59
SEC4YFL005W NTA1P40354 457 aa5.13□□□□□ -1.59
SEC4YFL005W NCE103P53615 221 aa5.13□□□□□ -1.59
SEC4YFL005W YNL011CP53980 444 aa5.13□□□□□ -1.59
SEC4YFL005W RRP15Q06511 250 aaPredicted RBP5.13□□□□□ -1.59
SEC4YFL005W ATE1P16639 503 aa5.12□□□□□ -1.59
SEC4YFL005W YBR287WP38355 427 aa5.12□□□□□ -1.59
SEC4YFL005W POL5P39985 1022 aaKnown RBP5.12□□□□□ -1.59
SEC4YFL005W PSY2P40164 858 aa5.12□□□□□ -1.59
SEC4YFL005W NIT1P40447 199 aa5.12□□□□□ -1.59
SEC4YFL005W BIO5P53744 561 aaKnown RBP5.12□□□□□ -1.59
SEC4YFL005W SOG2Q08817 791 aa5.12□□□□□ -1.59
SEC4YFL005W SEG2P34250 1132 aa5.11□□□□□ -1.59
SEC4YFL005W IRS4P36115 615 aaKnown RBP5.11□□□□□ -1.59
SEC4YFL005W MGE1P38523 228 aa5.11□□□□□ -1.59
SEC4YFL005W ECL1P48235 211 aa5.11□□□□□ -1.59
SEC4YFL005W NOP7P53261 605 aaKnown RBP5.11□□□□□ -1.59
SEC4YFL005W CDC55Q00362 526 aa5.11□□□□□ -1.59
SEC4YFL005W RSC4Q02206 625 aa5.11□□□□□ -1.59
SEC4YFL005W PHO4P07270 312 aaKnown RBP5.1□□□□□ -1.59
SEC4YFL005W LRG1P35688 1017 aa5.1□□□□□ -1.59
SEC4YFL005W AIM46P38885 310 aa5.1□□□□□ -1.59
SEC4YFL005W GCD6P32501 712 aaKnown RBP5.09□□□□□ -1.59
SEC4YFL005W SAM37P50110 327 aa5.09□□□□□ -1.59
SEC4YFL005W CTR9P89105 1077 aa5.09□□□□□ -1.59
SEC4YFL005W SPO71Q03868 1245 aa5.09□□□□□ -1.59
SEC4YFL005W GIC2Q06648 383 aa5.09□□□□□ -1.59
Retrieved 100 of 5,963 RNA–protein pairs in 44.4 ms